| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318919
Identifier: 158318919
GI number: 158318919
Start: 8794344
End: 8794775
Strand: Direct
Name: 158318919
Synonym: Franean1_7202
Alternate gene names: NA
Gene position: 8794344-8794775 (Clockwise)
Preceding gene: 158318916
Following gene: 158318920
Centisome position: 97.91
GC content: 72.69
Gene sequence:
>432_bases ATGAGCGATGACAAGGCACCGCCGCCCCAGGTCTGGCCGACGCTGCGAGCCCGCGACGCGCGGGCGCTGATCGCCTTCCT CACCGAGGCGTTCGGCTTCGAGGAGGTCGTCTCGTACGGCCCCGCCGACCACGGCGAAGCCGGTGACCGGGTGGACCACG CCGAGCTCGCGTGGCCGGAGGGCGGTGGTGTCATGCTCGGCTCGACCCGTGACAACCCCGACGATCCGTGGGCCTTCCAG CCGGGCGGCTTCGGCGCCTATGTGGTGACAGCCGAGCCGGACGCCCTGTGCGCCCGCGCCCGGGCCGCGGGAGCGGAGAT CACCGTGGAACTGCACGACACCGAGTACGGATCACGGGACTTCGCCGCCCGTGACCCCGAGGGCAACAGCTGGTCGTTCG GGACCTACCGGGGCGCGCCCCGCACGACCTGA
Upstream 100 bases:
>100_bases GGGCCTTGGGTTCGGCGAATCGTTGGACGGGCCGGACCCGCCCCGGGTCCGCTGACCATCGGCCGCGGAGAGTCGGCCGT GGAGAGGACGCGAACCAGTC
Downstream 100 bases:
>100_bases CGGAGGCCGCTCGGGCCCGAGACACTCCGCCAACCTGGGATCGATCCACCCGCCTGGGTCAGTCCGTCGAGCGGACCGAT CCGTCGGACCGGATGATCAT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase; Glyoxalase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Aminotransferase Class V/Cysteine Desulfurase
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSDDKAPPPQVWPTLRARDARALIAFLTEAFGFEEVVSYGPADHGEAGDRVDHAELAWPEGGGVMLGSTRDNPDDPWAFQ PGGFGAYVVTAEPDALCARARAAGAEITVELHDTEYGSRDFAARDPEGNSWSFGTYRGAPRTT
Sequences:
>Translated_143_residues MSDDKAPPPQVWPTLRARDARALIAFLTEAFGFEEVVSYGPADHGEAGDRVDHAELAWPEGGGVMLGSTRDNPDDPWAFQ PGGFGAYVVTAEPDALCARARAAGAEITVELHDTEYGSRDFAARDPEGNSWSFGTYRGAPRTT >Mature_142_residues SDDKAPPPQVWPTLRARDARALIAFLTEAFGFEEVVSYGPADHGEAGDRVDHAELAWPEGGGVMLGSTRDNPDDPWAFQP GGFGAYVVTAEPDALCARARAAGAEITVELHDTEYGSRDFAARDPEGNSWSFGTYRGAPRTT
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15356; Mature: 15225
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDKAPPPQVWPTLRARDARALIAFLTEAFGFEEVVSYGPADHGEAGDRVDHAELAWPE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEECCC GGGVMLGSTRDNPDDPWAFQPGGFGAYVVTAEPDALCARARAAGAEITVELHDTEYGSRD CCCEEEECCCCCCCCCCEECCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCC FAARDPEGNSWSFGTYRGAPRTT CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDDKAPPPQVWPTLRARDARALIAFLTEAFGFEEVVSYGPADHGEAGDRVDHAELAWPE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCEEECCC GGGVMLGSTRDNPDDPWAFQPGGFGAYVVTAEPDALCARARAAGAEITVELHDTEYGSRD CCCEEEECCCCCCCCCCEECCCCCEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCC FAARDPEGNSWSFGTYRGAPRTT CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA