Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318920

Identifier: 158318920

GI number: 158318920

Start: 8795202

End: 8796122

Strand: Direct

Name: 158318920

Synonym: Franean1_7203

Alternate gene names: NA

Gene position: 8795202-8796122 (Clockwise)

Preceding gene: 158318919

Following gene: 158318924

Centisome position: 97.92

GC content: 70.9

Gene sequence:

>921_bases
ATGGACGAGGCCACGCGCGCTGCGGTGAAATGGCCGGCGCACCGGAGTGCGCCCCAGGTCGAGCTGCGCACCGACATCCC
ACATTCCGCCCGGATGTACGACTACTTCCTCGGCGGCAAGGACAACTTCCCCGCCGACCGCGAAGCGGCCGAAGACCTGA
TGGCCGTCTACCCGGCCACCAGGACGACGGCGTTACAGGGCCGGTCGTTCATGACGAGGGCGATCCGCCACCTGGCCCGC
GACGCCGGGATACGCCAGTTCCTCGACATCGGGACGGGCATCCCGGCCAGCCCCAACCTGCACGAGACGGCACAGGCGGC
CGCCCCCGCGGCTCGGGTCCTGTACGTCGACAACGACCCGATCGTGCTGTCGCATGCTCGCGCCCTGCTGACGAGCACCC
CGCAGGGCCGGACGGCCTACCTGGACGCGGACCTGCTCGATCCCAGCAGGATCATCCGTTCCGCCGAGCTGCGCGACACT
TTCGACCTCGACCAGCCCGTCGCGTTGTCCCTGCTCTCGATCCTGCACTTCGTGCCGGACGACCGGGACCCGGCGGGCAT
CGTCCAGGAGCTGCTCGGGGCCCTCGCTCCGGGTAGCTACCTGGCTGTCGCCCACGCGACCGGGGATTTCGTGGCCCCGG
AGGTCGCCGAGCTCGGCACCACGATCTACCAGGACCGCGGGATCCCCTTCCAGCCCCGGTCCCGCGCCGAGATCACCGCG
TTGCTCGGCGGCCTCGAGCTGGTGGCGCCCGGGTTGGTCCCGGCCCACCGCTGGCAGCCGGAGGACGGGTCGGCGGAGCT
CACGGACGCCGAGGTCAGCAGCTACGGGGCGATCGCACGCAAACCCGTGAATCGCCCAGACGGCAACAATCACCAGGGCG
CGGGTCAGCCCCAGAGGTCGCAGTGGTGCGCCACGGCGTAG

Upstream 100 bases:

>100_bases
CCGCCGACCGGTCCTGAAGCGGCTGGTCGCGGGCGGTCCGCGGAGAGCACCCGCCTGGGCGACGGCGGCCAGGGGTGACT
GCGACAGCCCGGAGGCGGGG

Downstream 100 bases:

>100_bases
CCGGACCGCGCAAGCAGCACGCCTGGCTCGAGGGCCAGCCGGTCCGGAACGGTCGAGTTCCATTCCCCCGGCCAGGGCGG
CCAGCCCGGCAGCACCCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPATRTTALQGRSFMTRAIRHLAR
DAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDPIVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDT
FDLDQPVALSLLSILHFVPDDRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA
LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRSQWCATA

Sequences:

>Translated_306_residues
MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPATRTTALQGRSFMTRAIRHLAR
DAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDPIVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDT
FDLDQPVALSLLSILHFVPDDRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA
LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRSQWCATA
>Mature_306_residues
MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPATRTTALQGRSFMTRAIRHLAR
DAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDPIVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDT
FDLDQPVALSLLSILHFVPDDRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA
LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRSQWCATA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33020; Mature: 33020

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPAT
CCCHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCC
RTTALQGRSFMTRAIRHLARDAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEECCCC
IVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDTFDLDQPVALSLLSILHFVPD
EEHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
DRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRS
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC
QWCATA
CCCCCC
>Mature Secondary Structure
MDEATRAAVKWPAHRSAPQVELRTDIPHSARMYDYFLGGKDNFPADREAAEDLMAVYPAT
CCCHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCC
RTTALQGRSFMTRAIRHLARDAGIRQFLDIGTGIPASPNLHETAQAAAPAARVLYVDNDP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEEEECCCC
IVLSHARALLTSTPQGRTAYLDADLLDPSRIIRSAELRDTFDLDQPVALSLLSILHFVPD
EEHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
DRDPAGIVQELLGALAPGSYLAVAHATGDFVAPEVAELGTTIYQDRGIPFQPRSRAEITA
CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LLGGLELVAPGLVPAHRWQPEDGSAELTDAEVSSYGAIARKPVNRPDGNNHQGAGQPQRS
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCC
QWCATA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA