| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318906
Identifier: 158318906
GI number: 158318906
Start: 8779306
End: 8779740
Strand: Reverse
Name: 158318906
Synonym: Franean1_7189
Alternate gene names: NA
Gene position: 8779740-8779306 (Counterclockwise)
Preceding gene: 158318907
Following gene: 158318905
Centisome position: 97.75
GC content: 69.89
Gene sequence:
>435_bases GTGGTGAGACCACCCAGCCAGGACGCGCTCTGGGAGGCCGTCACCAGCCGCAACGAGGGCATTCTTGCCACGATCGGCGA GACCGGGCTGCCCCACCTCTCGAACGTCTACTACGTTGCCGACGCCGAGCGCCGGCTGGTCCGTGTCTCGACGACGGGCG TCCGGGTCAAGGGCCGCAACCTGCTCCGTGACCCCAGGGCCGTGCTGCACGTGCCCGGCGGCGACTTCTTCAATTTCGCC GTCGCGGAGGGCGAGGTCACGCTGGCGATCCCGAGCGCGCCGGGCGATGAGGCGACGGACGAGCTGTACGCCGTGCACTC GGTCTTCAACGGGGCGGCGGAGCGGCCGGCGTTCGACCACCAGATGCTCGAGGCAAGCCGCATGGTCATGCGGCTTGAGG TGAACCGCCTGTACGGCCTGCTGCACCGGGCCTGA
Upstream 100 bases:
>100_bases CCGTCCGTGGCCGAGGGGCGGCGTGCCACCACGGTGAGCGGACGCCGCAGCGATCGTCTGGGGGATCATTGGTGGAACGG TCACGCCGGTCGGGGCGGTC
Downstream 100 bases:
>100_bases CGGGCCCGCCTCGTGGACGACTGGCAGGTCGGGGAGGCGCCGGGAGATGGAGGAACGTCCGTGGACGACTTCGAGGTGAG CTTCGAGGTGAGCAAAGACG
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: PNP/PMP oxidase; PNPOx; Pyridoxal 5'-phosphate synthase [H]
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MVRPPSQDALWEAVTSRNEGILATIGETGLPHLSNVYYVADAERRLVRVSTTGVRVKGRNLLRDPRAVLHVPGGDFFNFA VAEGEVTLAIPSAPGDEATDELYAVHSVFNGAAERPAFDHQMLEASRMVMRLEVNRLYGLLHRA
Sequences:
>Translated_144_residues MVRPPSQDALWEAVTSRNEGILATIGETGLPHLSNVYYVADAERRLVRVSTTGVRVKGRNLLRDPRAVLHVPGGDFFNFA VAEGEVTLAIPSAPGDEATDELYAVHSVFNGAAERPAFDHQMLEASRMVMRLEVNRLYGLLHRA >Mature_144_residues MVRPPSQDALWEAVTSRNEGILATIGETGLPHLSNVYYVADAERRLVRVSTTGVRVKGRNLLRDPRAVLHVPGGDFFNFA VAEGEVTLAIPSAPGDEATDELYAVHSVFNGAAERPAFDHQMLEASRMVMRLEVNRLYGLLHRA
Specific function: Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019920 - InterPro: IPR011576 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01243 Pyridox_oxidase [H]
EC number: =1.4.3.5 [H]
Molecular weight: Translated: 15838; Mature: 15838
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPPSQDALWEAVTSRNEGILATIGETGLPHLSNVYYVADAERRLVRVSTTGVRVKGRN CCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCEEEECCC LLRDPRAVLHVPGGDFFNFAVAEGEVTLAIPSAPGDEATDELYAVHSVFNGAAERPAFDH CCCCCCEEEECCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHH QMLEASRMVMRLEVNRLYGLLHRA HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVRPPSQDALWEAVTSRNEGILATIGETGLPHLSNVYYVADAERRLVRVSTTGVRVKGRN CCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCEEEECCC LLRDPRAVLHVPGGDFFNFAVAEGEVTLAIPSAPGDEATDELYAVHSVFNGAAERPAFDH CCCCCCEEEECCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHH QMLEASRMVMRLEVNRLYGLLHRA HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]