Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is fdxA [H]

Identifier: 158318907

GI number: 158318907

Start: 8779987

End: 8780325

Strand: Reverse

Name: fdxA [H]

Synonym: Franean1_7190

Alternate gene names: 158318907

Gene position: 8780325-8779987 (Counterclockwise)

Preceding gene: 158318909

Following gene: 158318906

Centisome position: 97.75

GC content: 64.01

Gene sequence:

>339_bases
ATGCCATTCGTGATCACCTCCGCGTGCATCGATGTCAAGGACGGCGCGTGCCTGGGTGGCGGATGCCCGGCCGACTGCAT
CTACGAGGGAAACCGCAAGATGTACATAAACCCCGATGAATGCACCGAGTGCGGGGCGTGTGCGGTCGCCTGCCCGGTCG
GGGCGGCGATGATCGACGAGATGGTCCCGGACGAGGAGCAGGATTTCATCAAGAGCGAGGAGCTGTTCTTCTCCGAGGTC
CTGCCCGGCCGGGACGAGCCGCTCGGCGAGCCGGGCGGTGCCGCTGAGGTCGGCAAGATCAATGCTGACTCGGAATTCGT
CGCCGCGTACAAGAAGTAG

Upstream 100 bases:

>100_bases
ACTCCGGTCGGCGCGCGGCCGAGAAAATCGGGCTGTCGGGCGCGGGTGCACCGCGGTCGGCGGCCGCCGTCCTGTTCGGC
TGATTGGAGAGGATATCATC

Downstream 100 bases:

>100_bases
ATATCGCGGCGGGTGGAGGGGCACCTCGCCACGAGGCCACGCCGGCGGGTGATCGCTGCCGGCCTCCAGACAGATGCGCC
TGGTCCGCTCCCTGGTCGAT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MPFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDEMVPDEEQDFIKSEELFFSEV
LPGRDEPLGEPGGAAEVGKINADSEFVAAYKK

Sequences:

>Translated_112_residues
MPFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDEMVPDEEQDFIKSEELFFSEV
LPGRDEPLGEPGGAAEVGKINADSEFVAAYKK
>Mature_111_residues
PFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDEMVPDEEQDFIKSEELFFSEVL
PGRDEPLGEPGGAAEVGKINADSEFVAAYKK

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR000813 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 11833; Mature: 11702

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1 ; PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
7.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
9.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDE
CCEEECCEEEECCCCCEECCCCCCCEEEECCCEEEECCHHCCCCCCEEECCCCCHHHHHH
MVPDEEQDFIKSEELFFSEVLPGRDEPLGEPGGAAEVGKINADSEFVAAYKK
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECC
>Mature Secondary Structure 
PFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDE
CEEECCEEEECCCCCEECCCCCCCEEEECCCEEEECCHHCCCCCCEEECCCCCHHHHHH
MVPDEEQDFIKSEELFFSEVLPGRDEPLGEPGGAAEVGKINADSEFVAAYKK
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]