| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318887
Identifier: 158318887
GI number: 158318887
Start: 8751689
End: 8752411
Strand: Direct
Name: 158318887
Synonym: Franean1_7170
Alternate gene names: NA
Gene position: 8751689-8752411 (Clockwise)
Preceding gene: 158318884
Following gene: 158318888
Centisome position: 97.44
GC content: 71.78
Gene sequence:
>723_bases GTGCGCGGGTCGACGTCGACAGTCGAGAGCCAGCTGTCATCACTGGCGGATGTCTGCACGAAAGCCGAGACCAGCGAGGA GCTGTTCGAGCAGATCTCGAACCGGCTGCGTCGGCTGGTGCCCTTCGACGGGGCGGGCTGGTTCGCCACCGACCCGGCGA CCGTTCTGGCCACCAGCCCGGTACGGGTGGAGAACATCGAGACCAGCCGCTGCGAGTCGTACTGGGAACGCGAGTTCCTC GTCGAGGACGTGCTTCTCTTCCGCGACCTGGTCCGGTCCGAATCGGGTGTCGCGACGCTTTACACGGCGACGGACGACCA GCCCGCCCGCAGCGCCCGCTACCGGGAGTTCATCGCCCCGCAGGGCTACGGTGACGAGCTGCGCGCCGCGTTCCGGTTGG GTGGAAGCACCTGGGGCGTCGTCGACCTGTACCGGGACCGGGCCCGGGGCTCGTTCACCCCGGCCGAGGTCGGGCTCGTC CGCGCGCTCCTGCCGGTGATCGCGACCACGCTGCGTACCTTCACCACCGCCGCGCCCCGGCGCCCCGGCAGCCCGCGGAC GTCGACGTCGGCGTCGGCGTCGGCGTCGGCGTCGGCGCGGCCAGCGGTCCGGGCACCGCGCTGTTCGACGCTTCAGGGGC GCTGCTCTCGCTCGGCGAGAACGCCGAACGGCTGTTCACCGAGCTCGCCGGCTCCTCCTGGGCGGCGCCCTCGGTGTCGA TGA
Upstream 100 bases:
>100_bases ATCGCGGGACCACAGATGGGGGGTGTCGCCCCGCGTCCGCTGACCGCACACTTGCCACGCGGACGCATCCGGGTGATGCG CATGGCCGACGGGGAAAGCA
Downstream 100 bases:
>100_bases CACCGGTGCTCGCCGTGGTGGCCCGGGCGGTCGCCCGGGGCCTGTCGAACCAGGAGATCGCCGGCGAGTTGTTCCTGTCG CCGCACACCGTGCGGGACCA
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Transcriptional Regulator Luxr
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MRGSTSTVESQLSSLADVCTKAETSEELFEQISNRLRRLVPFDGAGWFATDPATVLATSPVRVENIETSRCESYWEREFL VEDVLLFRDLVRSESGVATLYTATDDQPARSARYREFIAPQGYGDELRAAFRLGGSTWGVVDLYRDRARGSFTPAEVGLV RALLPVIATTLRTFTTAAPRRPGSPRTSTSASASASASARPAVRAPRCSTLQGRCSRSARTPNGCSPSSPAPPGRRPRCR
Sequences:
>Translated_240_residues MRGSTSTVESQLSSLADVCTKAETSEELFEQISNRLRRLVPFDGAGWFATDPATVLATSPVRVENIETSRCESYWEREFL VEDVLLFRDLVRSESGVATLYTATDDQPARSARYREFIAPQGYGDELRAAFRLGGSTWGVVDLYRDRARGSFTPAEVGLV RALLPVIATTLRTFTTAAPRRPGSPRTSTSASASASASARPAVRAPRCSTLQGRCSRSARTPNGCSPSSPAPPGRRPRCR >Mature_240_residues MRGSTSTVESQLSSLADVCTKAETSEELFEQISNRLRRLVPFDGAGWFATDPATVLATSPVRVENIETSRCESYWEREFL VEDVLLFRDLVRSESGVATLYTATDDQPARSARYREFIAPQGYGDELRAAFRLGGSTWGVVDLYRDRARGSFTPAEVGLV RALLPVIATTLRTFTTAAPRRPGSPRTSTSASASASASARPAVRAPRCSTLQGRCSRSARTPNGCSPSSPAPPGRRPRCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26109; Mature: 26109
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSTSTVESQLSSLADVCTKAETSEELFEQISNRLRRLVPFDGAGWFATDPATVLATSP CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC VRVENIETSRCESYWEREFLVEDVLLFRDLVRSESGVATLYTATDDQPARSARYREFIAP EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC QGYGDELRAAFRLGGSTWGVVDLYRDRARGSFTPAEVGLVRALLPVIATTLRTFTTAAPR CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RPGSPRTSTSASASASASARPAVRAPRCSTLQGRCSRSARTPNGCSPSSPAPPGRRPRCR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRGSTSTVESQLSSLADVCTKAETSEELFEQISNRLRRLVPFDGAGWFATDPATVLATSP CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCC VRVENIETSRCESYWEREFLVEDVLLFRDLVRSESGVATLYTATDDQPARSARYREFIAP EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCC QGYGDELRAAFRLGGSTWGVVDLYRDRARGSFTPAEVGLVRALLPVIATTLRTFTTAAPR CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC RPGSPRTSTSASASASASARPAVRAPRCSTLQGRCSRSARTPNGCSPSSPAPPGRRPRCR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA