| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318865
Identifier: 158318865
GI number: 158318865
Start: 8727919
End: 8728269
Strand: Reverse
Name: 158318865
Synonym: Franean1_7146
Alternate gene names: NA
Gene position: 8728269-8727919 (Counterclockwise)
Preceding gene: 158318866
Following gene: 158318864
Centisome position: 97.17
GC content: 66.67
Gene sequence:
>351_bases ATGATGCACCTGGTCGGGCGGTGGCGGATCGTGGAGATGAACCTGTGGGACCAGGACGCCATAGACCTCGTTGAGCCCGG GTTCATCGAGTTCACCGAGGGCGGGACCGGCCAGTTCGGGTTCATCGCCGTCCGCGGTGGGATGGACTGCCGTTCCACCG AACGCGGCGACCGGCCCCTCGTTGAGTTCAGTTGGGACGGCGACGACGACGGCCACCAGGTCAGCGGGCGCGGCTGGGCC GCACTGAGCGAGAACGGCGTGCTCGCCGGGCACCTGTTCTTCCACATGGGAGACGACTCAGGCTTCCGCGCTACGCCGTT TACCGAAACTGACGTACGGGACGGGCGTTGA
Upstream 100 bases:
>100_bases ACTGGCTGATCTGCTGTCGTCCTGTGCGCGTCCTCATCGCCGGTAACCGAAGTCCCGTGGGCATGGCGCGGTCACGGTCA CAGCATGTGTGGAGGATCGA
Downstream 100 bases:
>100_bases GCGAGTGCTACGAGTTCTTACGGCCGGGCAGCATCTCGACGCGCAGGCGCAGGCCTACATATGCTCTCTGTCCACTAGCG CCGGCTTCCCCAAGCCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPLVEFSWDGDDDGHQVSGRGWA ALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR
Sequences:
>Translated_116_residues MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPLVEFSWDGDDDGHQVSGRGWA ALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR >Mature_116_residues MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPLVEFSWDGDDDGHQVSGRGWA ALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12923; Mature: 12923
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPL CCEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCE VEFSWDGDDDGHQVSGRGWAALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR EEEECCCCCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCC >Mature Secondary Structure MMHLVGRWRIVEMNLWDQDAIDLVEPGFIEFTEGGTGQFGFIAVRGGMDCRSTERGDRPL CCEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCE VEFSWDGDDDGHQVSGRGWAALSENGVLAGHLFFHMGDDSGFRATPFTETDVRDGR EEEECCCCCCCCEECCCEEEEECCCCEEEEEEEEEECCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA