| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318864
Identifier: 158318864
GI number: 158318864
Start: 8726550
End: 8727410
Strand: Reverse
Name: 158318864
Synonym: Franean1_7145
Alternate gene names: NA
Gene position: 8727410-8726550 (Counterclockwise)
Preceding gene: 158318865
Following gene: 158318862
Centisome position: 97.17
GC content: 64.11
Gene sequence:
>861_bases ATGGTGTTGGTGATGGGGATCAGCTTCCTGTTCGGCTTCGGTAACTCCTGGGCATTGGGTCTCCATCTGGGTGTGTCGCC GTACGTCGAGCCGTTGGTCGCTCCCGCGGTGGACCTGTCGGTGGTCGGCCTTCTGCTCGGCATCCGCCAGCTGGCGCTCG GCGGTGCGACTACCCGGCAGATGCGGCCGGCGTGGCGGCTGCTCGTGTTCGCCGGTTTCGTCACGCTGGCGCTGAATGTC GCCGAACCTCTCATCGAGCGGAACTACGGCAGGGAGGCCTTCGACGCTGTTGGTCCGCTTCTCCTGATCGGCTGGGCCGA GGTGGGGCCAGGTCTGCTTCAAGAGATGAAGGCTATCGAGACCAAAGCGGCCCAGCCCATGTCTGTTTATGGCCTGCCCG CAGCGGACGAGGCATCCGTGCAGTCGGAAGCTTGCAGGGTTACGTCCGCTGCGTCGGCGCTACCTCACGCAAGGCAGTCG GAGGACGACGCCAACCCCGTTCGGCACATTCAGATGGTCGAGTCGAATAATGCATCCTCGTCAGGAGCGACGATGGGCGA GGCCGCCTCCGATCCGGAACGAGGCACGCCGGAGGATTCATCCCCGACAACCAAGGTCGGAGAAGGGGAGGCGGACCAGC GCCGGCTTGATAAGAAAGCGCGCGAACAAGACCTACTTCATCGGGCTCGTGCGGAGGATGTGCTGCACTGGCAGCATCAA CAGCGTCCGATTTCGGCGGACACACTACGGAAACGGCTCCACGTGGGTGCTCCCACCGCTCGCAGACTCGTCGCGCAGCT ACGCAGCGACACCCACATCCAGATCGAAGGCGCCGGGGATCAACCGCCCGATGTCGACTGA
Upstream 100 bases:
>100_bases AACTTGAGGTTCCCGTGCGTGGAAGTGCCCGGTGACCGCGCCGGGCAAACGTGGCAGCCACGGGGCGGCGAGTTCTGCCG TCCGCGGTGTCACTGTGATC
Downstream 100 bases:
>100_bases AGTCCATTGACTTGTTGGGTAATGGCGCATGCAGTGGTTTCTCCCAGGCGATATTCGGGGTCGATGAGAATTCCCCCGAG CGCCGCGCCTATGGTGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MVLVMGISFLFGFGNSWALGLHLGVSPYVEPLVAPAVDLSVVGLLLGIRQLALGGATTRQMRPAWRLLVFAGFVTLALNV AEPLIERNYGREAFDAVGPLLLIGWAEVGPGLLQEMKAIETKAAQPMSVYGLPAADEASVQSEACRVTSAASALPHARQS EDDANPVRHIQMVESNNASSSGATMGEAASDPERGTPEDSSPTTKVGEGEADQRRLDKKAREQDLLHRARAEDVLHWQHQ QRPISADTLRKRLHVGAPTARRLVAQLRSDTHIQIEGAGDQPPDVD
Sequences:
>Translated_286_residues MVLVMGISFLFGFGNSWALGLHLGVSPYVEPLVAPAVDLSVVGLLLGIRQLALGGATTRQMRPAWRLLVFAGFVTLALNV AEPLIERNYGREAFDAVGPLLLIGWAEVGPGLLQEMKAIETKAAQPMSVYGLPAADEASVQSEACRVTSAASALPHARQS EDDANPVRHIQMVESNNASSSGATMGEAASDPERGTPEDSSPTTKVGEGEADQRRLDKKAREQDLLHRARAEDVLHWQHQ QRPISADTLRKRLHVGAPTARRLVAQLRSDTHIQIEGAGDQPPDVD >Mature_286_residues MVLVMGISFLFGFGNSWALGLHLGVSPYVEPLVAPAVDLSVVGLLLGIRQLALGGATTRQMRPAWRLLVFAGFVTLALNV AEPLIERNYGREAFDAVGPLLLIGWAEVGPGLLQEMKAIETKAAQPMSVYGLPAADEASVQSEACRVTSAASALPHARQS EDDANPVRHIQMVESNNASSSGATMGEAASDPERGTPEDSSPTTKVGEGEADQRRLDKKAREQDLLHRARAEDVLHWQHQ QRPISADTLRKRLHVGAPTARRLVAQLRSDTHIQIEGAGDQPPDVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30739; Mature: 30739
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLVMGISFLFGFGNSWALGLHLGVSPYVEPLVAPAVDLSVVGLLLGIRQLALGGATTRQ CEEEEEHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH MRPAWRLLVFAGFVTLALNVAEPLIERNYGREAFDAVGPLLLIGWAEVGPGLLQEMKAIE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHEEEHHHHCHHHHHHHHHHH TKAAQPMSVYGLPAADEASVQSEACRVTSAASALPHARQSEDDANPVRHIQMVESNNASS HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEECCCCCC SGATMGEAASDPERGTPEDSSPTTKVGEGEADQRRLDKKAREQDLLHRARAEDVLHWQHQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRPISADTLRKRLHVGAPTARRLVAQLRSDTHIQIEGAGDQPPDVD CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MVLVMGISFLFGFGNSWALGLHLGVSPYVEPLVAPAVDLSVVGLLLGIRQLALGGATTRQ CEEEEEHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH MRPAWRLLVFAGFVTLALNVAEPLIERNYGREAFDAVGPLLLIGWAEVGPGLLQEMKAIE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHEEEHHHHCHHHHHHHHHHH TKAAQPMSVYGLPAADEASVQSEACRVTSAASALPHARQSEDDANPVRHIQMVESNNASS HHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEECCCCCC SGATMGEAASDPERGTPEDSSPTTKVGEGEADQRRLDKKAREQDLLHRARAEDVLHWQHQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRPISADTLRKRLHVGAPTARRLVAQLRSDTHIQIEGAGDQPPDVD CCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA