Click here to switch to the map view.

The map label for this gene is srlR [C]

Identifier: 158318861

GI number: 158318861

Start: 8723203

End: 8723571

Strand: Direct

Name: srlR [C]

Synonym: Franean1_7142

Alternate gene names: 158318861

Gene position: 8723203-8723571 (Clockwise)

Preceding gene: 158318860

Following gene: 158318863

Centisome position: 97.12

GC content: 71.82

Gene sequence:

>369_bases
GTGGACCACCCGTCCACCGACGCGCTCCTAATCGGCGGCCGGCTCTTCAGGCACTCGGCCGTCACCTGCGGCGCGGCCGC
CGCCGAGGCGGCCAACCAGGTGCGGGCCGACCTCCTCCTGCTGGGCGTCACCGGCGTGCACTGCGAGGCCGGGCTGACCA
CCGGCGACGCCGACGAGGCGGCGATGAAACGCACCCTCGCCCGGCAGACCGCCGACACCTACGTGCTGGCGCTAGCCAGC
AGCGAGAAGATCGGCACCGCATCGCCGTTCACCGTGCTGCCGGTCGCGTCGGTGAGCGGCCTCATCACCGACGCCACCGA
CGACCGCCCGGTCATCGCCGAGCTGCTTAAACAGGAACGACGATCCTGA

Upstream 100 bases:

>100_bases
CCAGGCCGGGGTTTCTCTTTGCCCGGATAAGACGGTGAGGGCGGCGCGCGCGATCAGGCGGCGAGCGGGATGTCTTCCAC
CTGGTAGTAGATGGGAAGTC

Downstream 100 bases:

>100_bases
AAGCTCGCTGACCGTTCCCGTCAGGCCGGCGGCAGCGTTGGCTGGGCCACCATCCCGTTTGGGGGCACGTTAGGGGCACG
TTCGGCTGAAGATCGGACAA

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator DeoR Family; Regulatory Protein DeoR; DeoR-Type Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Deor Family; Transcriptional Regulator Protein

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MDHPSTDALLIGGRLFRHSAVTCGAAAAEAANQVRADLLLLGVTGVHCEAGLTTGDADEAAMKRTLARQTADTYVLALAS
SEKIGTASPFTVLPVASVSGLITDATDDRPVIAELLKQERRS

Sequences:

>Translated_122_residues
MDHPSTDALLIGGRLFRHSAVTCGAAAAEAANQVRADLLLLGVTGVHCEAGLTTGDADEAAMKRTLARQTADTYVLALAS
SEKIGTASPFTVLPVASVSGLITDATDDRPVIAELLKQERRS
>Mature_122_residues
MDHPSTDALLIGGRLFRHSAVTCGAAAAEAANQVRADLLLLGVTGVHCEAGLTTGDADEAAMKRTLARQTADTYVLALAS
SEKIGTASPFTVLPVASVSGLITDATDDRPVIAELLKQERRS

Specific function: Unknown

COG id: COG1349

COG function: function code KG; Transcriptional regulators of sugar metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12645; Mature: 12645

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHPSTDALLIGGRLFRHSAVTCGAAAAEAANQVRADLLLLGVTGVHCEAGLTTGDADEA
CCCCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCHHH
AMKRTLARQTADTYVLALASSEKIGTASPFTVLPVASVSGLITDATDDRPVIAELLKQER
HHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEHHHHCCEEECCCCCCHHHHHHHHHHH
RS
CC
>Mature Secondary Structure
MDHPSTDALLIGGRLFRHSAVTCGAAAAEAANQVRADLLLLGVTGVHCEAGLTTGDADEA
CCCCCCCEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCHHH
AMKRTLARQTADTYVLALASSEKIGTASPFTVLPVASVSGLITDATDDRPVIAELLKQER
HHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEEHHHHCCEEECCCCCCHHHHHHHHHHH
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA