| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318860
Identifier: 158318860
GI number: 158318860
Start: 8722825
End: 8723073
Strand: Direct
Name: 158318860
Synonym: Franean1_7141
Alternate gene names: NA
Gene position: 8722825-8723073 (Clockwise)
Preceding gene: 158318859
Following gene: 158318861
Centisome position: 97.11
GC content: 70.68
Gene sequence:
>249_bases TTGACCGACACGAACACCTACGCGTACGTCGACGCTGACACCCTCGACGTCCGGATCATCCGTGGTGAGGCTGACACGGA AGGCACCATCGTCGGCCGCCTCGACGCCGCCGACCTCCCCGCCCTCAGCGAGGCCGCCGACAAGCTGCTCGCGACCCTCG GCGTCCGCCCCGTCAGCGACTGGCGCGATGTTGAGGGCGGCCTGTTCGCCGTCGTCGAGGAGACCGCGGCGGTGCCAACG GCCGGCTGA
Upstream 100 bases:
>100_bases CCTGACACCTCGGGAGGCGCGTGGCTCGGGTCCGCGTCGCTGCGTAAGGATTTCCCTCGTACGAATCGAACCGATCTCTC CATGTCCCAAGGAGGCTCCC
Downstream 100 bases:
>100_bases CCGGCGACCACGAGCGCCCCGGTCTGGGGCCAGGCCGGGGTTTCTCTTTGCCCGGATAAGACGGTGAGGGCGGCGCGCGC GATCAGGCGGCGAGCGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTDTNTYAYVDADTLDVRIIRGEADTEGTIVGRLDAADLPALSEAADKLLATLGVRPVSDWRDVEGGLFAVVEETAAVPT AG
Sequences:
>Translated_82_residues MTDTNTYAYVDADTLDVRIIRGEADTEGTIVGRLDAADLPALSEAADKLLATLGVRPVSDWRDVEGGLFAVVEETAAVPT AG >Mature_81_residues TDTNTYAYVDADTLDVRIIRGEADTEGTIVGRLDAADLPALSEAADKLLATLGVRPVSDWRDVEGGLFAVVEETAAVPTA G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8594; Mature: 8462
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTNTYAYVDADTLDVRIIRGEADTEGTIVGRLDAADLPALSEAADKLLATLGVRPVSD CCCCCEEEEEECCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC WRDVEGGLFAVVEETAAVPTAG CCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure TDTNTYAYVDADTLDVRIIRGEADTEGTIVGRLDAADLPALSEAADKLLATLGVRPVSD CCCCEEEEEECCCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCC WRDVEGGLFAVVEETAAVPTAG CCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA