| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318839
Identifier: 158318839
GI number: 158318839
Start: 8690096
End: 8690599
Strand: Reverse
Name: 158318839
Synonym: Franean1_7120
Alternate gene names: NA
Gene position: 8690599-8690096 (Counterclockwise)
Preceding gene: 158318840
Following gene: 158318833
Centisome position: 96.76
GC content: 62.9
Gene sequence:
>504_bases GTGTTCGCTTTGGCCGCCCTCTTAATCTCCGTCATCGCGCTAGCCCTGGCTGCATGGCAGATACATGTCGTCCGCGGCGC GAACCACCTGCCCGTGGTCCTCGATGCCTTCAAGGCGTCGCGCTGCCCGGAGTGGTTCGAGGCGCAGGAATACATCCTGA ACAGGTTGTCGAGGGAGCACGCCGCCGGATGCGCCTGGCGTGATCTGCCGCAGCAGGCACGCGACCAGGTCAATACCATC GGGCTGTTCTATGACGACCTTGGCAAACTCATCGCGCACCAGGTGATCAGCGGGGATCTGGTCATCGGCTCCTACGGCGA CTCGATCGTGTATCTGTGGGACGTCCTGGCACCATACGTCTACGCAGAGCGAGCACATGTGCCAGACTTCTGGGTCTACT TCGAGGACCTCGCGGCACGGACCGCCAAGACGTCGACCCGGGCCGTTTACGCGAAACTACGTCTCCGCAAGCGCCCGCCA TGCCGGCAACCAGATGCGGCCTAA
Upstream 100 bases:
>100_bases TTGGCTTGATATCGCTCACCGGTTCATCGCGTCGCAGGTCCCGGAAGGCGGCACCTTTGTAGCTTCTCCTTCGCTACGAT CCATGGTCATGGAGAACTTT
Downstream 100 bases:
>100_bases TTCAGCCAGGCACCAGTGCCGACCGGAACTCCCTTGCCAGCGGGGCCAGCAGACCCGACCCCTCACGCCCCACCCACATT GATGATCCCTTTCGGTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MFALAALLISVIALALAAWQIHVVRGANHLPVVLDAFKASRCPEWFEAQEYILNRLSREHAAGCAWRDLPQQARDQVNTI GLFYDDLGKLIAHQVISGDLVIGSYGDSIVYLWDVLAPYVYAERAHVPDFWVYFEDLAARTAKTSTRAVYAKLRLRKRPP CRQPDAA
Sequences:
>Translated_167_residues MFALAALLISVIALALAAWQIHVVRGANHLPVVLDAFKASRCPEWFEAQEYILNRLSREHAAGCAWRDLPQQARDQVNTI GLFYDDLGKLIAHQVISGDLVIGSYGDSIVYLWDVLAPYVYAERAHVPDFWVYFEDLAARTAKTSTRAVYAKLRLRKRPP CRQPDAA >Mature_167_residues MFALAALLISVIALALAAWQIHVVRGANHLPVVLDAFKASRCPEWFEAQEYILNRLSREHAAGCAWRDLPQQARDQVNTI GLFYDDLGKLIAHQVISGDLVIGSYGDSIVYLWDVLAPYVYAERAHVPDFWVYFEDLAARTAKTSTRAVYAKLRLRKRPP CRQPDAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18810; Mature: 18810
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFALAALLISVIALALAAWQIHVVRGANHLPVVLDAFKASRCPEWFEAQEYILNRLSREH CHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AAGCAWRDLPQQARDQVNTIGLFYDDLGKLIAHQVISGDLVIGSYGDSIVYLWDVLAPYV HCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHH YAERAHVPDFWVYFEDLAARTAKTSTRAVYAKLRLRKRPPCRQPDAA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFALAALLISVIALALAAWQIHVVRGANHLPVVLDAFKASRCPEWFEAQEYILNRLSREH CHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AAGCAWRDLPQQARDQVNTIGLFYDDLGKLIAHQVISGDLVIGSYGDSIVYLWDVLAPYV HCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHH YAERAHVPDFWVYFEDLAARTAKTSTRAVYAKLRLRKRPPCRQPDAA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA