| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is cyp123 [H]
Identifier: 158318825
GI number: 158318825
Start: 8667260
End: 8668450
Strand: Direct
Name: cyp123 [H]
Synonym: Franean1_7099
Alternate gene names: 158318825
Gene position: 8667260-8668450 (Clockwise)
Preceding gene: 158318823
Following gene: 158318826
Centisome position: 96.5
GC content: 66.08
Gene sequence:
>1191_bases GTGACCCAGGACGATCTCTACTACGATCCGTACGATGTCGAGATCGATGTCGACCCGTACCCCACCTACCGGCGGCTGCG AGACGAGGAACCGCTCTACTACAACGAGCGCCTCGATTTCTGGGGCCTGAGTCGCTTCGCTGACGTCGGGGCCGCCCTGA AGGACCAGAAGCGCCTCAGCTCGGCGAAGGGGGACATCCTCGAGGTCATCAAGGCCGATCCCGTCATGCCGCCCGGGGTG TTCATCAACGAGGACCCGCCGCTGCACACGGTGCACCGCGTCCTGGTGTCGCGCGCCTTCACTCCGAAGAAGATGAAGGC GCTTGAGGACAAGATCCGGGCCTTCTGTATCGCCTGCCTGGAGCCCCTCGAGGGAGCGGACCGGTTCGACTTCGTGGCCG ACCTCGGTGACGAGCTTCCGATGCGCGCCATCGGCATGCTCGTCGGCATCCCCGACGCGGAGCAGCCGACGGTCCGCGAC CACGCGCAGCGCGGGCTGCGCAACGAGCGGGGCAAGCCACTGACGGTCACCAAGGACAAGTATTTCGACGGCGACTTCTA CGCCGACTACGTCGCCTGGCGGGAGAAGAACCCCTCCGACGACCTCATCACCGAGCTGCTCAACGTCGAGTTCGAAGACG TCTCAGGGACCACCCGGCGGCTGACCAAGGAAGAAATCCTGATCTTCCTCGCTGTGATCGCAGGCGCCGGGGTCGAGACC ACGGGCAACCTGTTCGGCTGGCTCGGCAAGGTCCTCGCCGAACATCCCGACCAACGCCAGCAGATCGTCTCCGACCGCTC GCTCATCCCGAACGCAATCGAGGAGCTGCTGCGCTACGAGCCGCCCGGCCCGCACGTCGCGCGCTACGTCACCGAGGACG TCGAATACCACGGACAGACGGTGCCAGCCGGAAGCGCGCTGCTGCTCATGCTGTCCTCGGCCAACCGCGACGAGCGTCAG TTCACCGACCCCGGCCGCTTCGACATCCACCGCTCCATCAGCCAACACGTGACCTTCGGTATCGGCGCGCACTTCTGCCT CGGCGCCGCCCTCGCCCGCATGGAGGGACGCATCGCCCTCGACGAGGTCCTCAACCGATTCCCCGAATGGGACCTCGACA TGGCCAATGCCCGCCGGAAACCCACCACCACGGTGCGCGGCTGGGACTCCATGCCGGCAATCGTCGGCTGA
Upstream 100 bases:
>100_bases ACGACCGCTGACCGCCGGACAGCGCCTGAGCCTCCCTCAACCTCTATACGGATGTATTACACAGTGCTATACATCTGTAA AGACCACGCGAGGAGGGGCC
Downstream 100 bases:
>100_bases CCCGGTACGGGCCTGACCCACGACCTCCCGCACCACGACGGGCGCCACCCGCGCTCCTGTCGGCAAATGACCCCGCGCAC GACACGAAAGGGCTCGGCCT
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTQDDLYYDPYDVEIDVDPYPTYRRLRDEEPLYYNERLDFWGLSRFADVGAALKDQKRLSSAKGDILEVIKADPVMPPGV FINEDPPLHTVHRVLVSRAFTPKKMKALEDKIRAFCIACLEPLEGADRFDFVADLGDELPMRAIGMLVGIPDAEQPTVRD HAQRGLRNERGKPLTVTKDKYFDGDFYADYVAWREKNPSDDLITELLNVEFEDVSGTTRRLTKEEILIFLAVIAGAGVET TGNLFGWLGKVLAEHPDQRQQIVSDRSLIPNAIEELLRYEPPGPHVARYVTEDVEYHGQTVPAGSALLLMLSSANRDERQ FTDPGRFDIHRSISQHVTFGIGAHFCLGAALARMEGRIALDEVLNRFPEWDLDMANARRKPTTTVRGWDSMPAIVG
Sequences:
>Translated_396_residues MTQDDLYYDPYDVEIDVDPYPTYRRLRDEEPLYYNERLDFWGLSRFADVGAALKDQKRLSSAKGDILEVIKADPVMPPGV FINEDPPLHTVHRVLVSRAFTPKKMKALEDKIRAFCIACLEPLEGADRFDFVADLGDELPMRAIGMLVGIPDAEQPTVRD HAQRGLRNERGKPLTVTKDKYFDGDFYADYVAWREKNPSDDLITELLNVEFEDVSGTTRRLTKEEILIFLAVIAGAGVET TGNLFGWLGKVLAEHPDQRQQIVSDRSLIPNAIEELLRYEPPGPHVARYVTEDVEYHGQTVPAGSALLLMLSSANRDERQ FTDPGRFDIHRSISQHVTFGIGAHFCLGAALARMEGRIALDEVLNRFPEWDLDMANARRKPTTTVRGWDSMPAIVG >Mature_395_residues TQDDLYYDPYDVEIDVDPYPTYRRLRDEEPLYYNERLDFWGLSRFADVGAALKDQKRLSSAKGDILEVIKADPVMPPGVF INEDPPLHTVHRVLVSRAFTPKKMKALEDKIRAFCIACLEPLEGADRFDFVADLGDELPMRAIGMLVGIPDAEQPTVRDH AQRGLRNERGKPLTVTKDKYFDGDFYADYVAWREKNPSDDLITELLNVEFEDVSGTTRRLTKEEILIFLAVIAGAGVETT GNLFGWLGKVLAEHPDQRQQIVSDRSLIPNAIEELLRYEPPGPHVARYVTEDVEYHGQTVPAGSALLLMLSSANRDERQF TDPGRFDIHRSISQHVTFGIGAHFCLGAALARMEGRIALDEVLNRFPEWDLDMANARRKPTTTVRGWDSMPAIVG
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44747; Mature: 44616
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDDLYYDPYDVEIDVDPYPTYRRLRDEEPLYYNERLDFWGLSRFADVGAALKDQKRLS CCCCCCEECCEEEEEECCCCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH SAKGDILEVIKADPVMPPGVFINEDPPLHTVHRVLVSRAFTPKKMKALEDKIRAFCIACL HHCHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EPLEGADRFDFVADLGDELPMRAIGMLVGIPDAEQPTVRDHAQRGLRNERGKPLTVTKDK HHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCC YFDGDFYADYVAWREKNPSDDLITELLNVEFEDVSGTTRRLTKEEILIFLAVIAGAGVET CCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC TGNLFGWLGKVLAEHPDQRQQIVSDRSLIPNAIEELLRYEPPGPHVARYVTEDVEYHGQT CHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC VPAGSALLLMLSSANRDERQFTDPGRFDIHRSISQHVTFGIGAHFCLGAALARMEGRIAL CCCCHHHHHEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DEVLNRFPEWDLDMANARRKPTTTVRGWDSMPAIVG HHHHHHCCCCCCCHHHCCCCCCCEECCCCCCCCCCC >Mature Secondary Structure TQDDLYYDPYDVEIDVDPYPTYRRLRDEEPLYYNERLDFWGLSRFADVGAALKDQKRLS CCCCCEECCEEEEEECCCCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHH SAKGDILEVIKADPVMPPGVFINEDPPLHTVHRVLVSRAFTPKKMKALEDKIRAFCIACL HHCHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH EPLEGADRFDFVADLGDELPMRAIGMLVGIPDAEQPTVRDHAQRGLRNERGKPLTVTKDK HHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCC YFDGDFYADYVAWREKNPSDDLITELLNVEFEDVSGTTRRLTKEEILIFLAVIAGAGVET CCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC TGNLFGWLGKVLAEHPDQRQQIVSDRSLIPNAIEELLRYEPPGPHVARYVTEDVEYHGQT CHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC VPAGSALLLMLSSANRDERQFTDPGRFDIHRSISQHVTFGIGAHFCLGAALARMEGRIAL CCCCHHHHHEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DEVLNRFPEWDLDMANARRKPTTTVRGWDSMPAIVG HHHHHHCCCCCCCHHHCCCCCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]