| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is acrR [C]
Identifier: 158318823
GI number: 158318823
Start: 8665265
End: 8665885
Strand: Direct
Name: acrR [C]
Synonym: Franean1_7097
Alternate gene names: 158318823
Gene position: 8665265-8665885 (Clockwise)
Preceding gene: 158318822
Following gene: 158318825
Centisome position: 96.47
GC content: 62.8
Gene sequence:
>621_bases ATGACGACACCCCGCCGGGTTGGCGCGGAAACATCCAAGACACGCGCGGCGTTGTTGGACAGTGCCGAGAGGCTCATGCT CAGCGAGGGGTACGCGGCAGTGACCTACCGTGGGGTGGCGTCCCGGGCCGGAGTGACGTCCGGATTGGTCCAGTACTATT TTCCGACACTGGACGATCTTTTTCTCGCCCTGGTTCGGCGCCGGACAGACCAGACCTTGGGGGTGCTGGTCGAGGCGCTC CGGACGGATCACCCCCTGCGGGCACTCTGGGAGTTTTCGAACAACTGGACCGCCGGCGCTCTGATAACGGAACTCACGGC CCTGGCGAACCACCGCAAGAAAATCAGGACCGAGATCGCCGCCGTCGGCGAGAAGGTGCGTGAGTTGACACTTGAGGCAC TATCGAGGTCGTCGAACGATTACACGGTTCCCCTGGGCAGAGTTCCGGCCGAGGTACTCGTCTTTTTGGTGACCAGCAGC CCGCGGATGGTCATCATGGAACAGTCGGTCGGCATGTCGACGTCTCACGCGGAGACGATCGACTTTGTTGAGCGCTACCT GGACAAGGTCGAACCCCGGACGGCGCGCGAGAGCGCGGCGAGTCGGGAATCGGACACGTAA
Upstream 100 bases:
>100_bases GAGAGGCACCAGGAGTTTGACGACCACGGACAGTCGAGGTCGGCGCCGGGCGGCACTCGCCGGGTGCGCCACCCTGTGAC ACTGCTCTGAAAGGCCCCAG
Downstream 100 bases:
>100_bases TCGTGTGACGCCTCGCGGGCGTCTGATGCAAATTTTTCGGCGTCCTGCCGCCTGAATCCAGCGTTTCCCCTGGCGCCGCT CTGATCGCCGTGGAGGGGTA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Regulatory Protein; Transcriptional Regulator
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTTPRRVGAETSKTRAALLDSAERLMLSEGYAAVTYRGVASRAGVTSGLVQYYFPTLDDLFLALVRRRTDQTLGVLVEAL RTDHPLRALWEFSNNWTAGALITELTALANHRKKIRTEIAAVGEKVRELTLEALSRSSNDYTVPLGRVPAEVLVFLVTSS PRMVIMEQSVGMSTSHAETIDFVERYLDKVEPRTARESAASRESDT
Sequences:
>Translated_206_residues MTTPRRVGAETSKTRAALLDSAERLMLSEGYAAVTYRGVASRAGVTSGLVQYYFPTLDDLFLALVRRRTDQTLGVLVEAL RTDHPLRALWEFSNNWTAGALITELTALANHRKKIRTEIAAVGEKVRELTLEALSRSSNDYTVPLGRVPAEVLVFLVTSS PRMVIMEQSVGMSTSHAETIDFVERYLDKVEPRTARESAASRESDT >Mature_205_residues TTPRRVGAETSKTRAALLDSAERLMLSEGYAAVTYRGVASRAGVTSGLVQYYFPTLDDLFLALVRRRTDQTLGVLVEALR TDHPLRALWEFSNNWTAGALITELTALANHRKKIRTEIAAVGEKVRELTLEALSRSSNDYTVPLGRVPAEVLVFLVTSSP RMVIMEQSVGMSTSHAETIDFVERYLDKVEPRTARESAASRESDT
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22819; Mature: 22688
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRRVGAETSKTRAALLDSAERLMLSEGYAAVTYRGVASRAGVTSGLVQYYFPTLDDL CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHCCHHHHHHHHHHCCHHHH FLALVRRRTDQTLGVLVEALRTDHPLRALWEFSNNWTAGALITELTALANHRKKIRTEIA HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVGEKVRELTLEALSRSSNDYTVPLGRVPAEVLVFLVTSSPRMVIMEQSVGMSTSHAETI HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHH DFVERYLDKVEPRTARESAASRESDT HHHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure TTPRRVGAETSKTRAALLDSAERLMLSEGYAAVTYRGVASRAGVTSGLVQYYFPTLDDL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHCCHHHHHHHHHHCCHHHH FLALVRRRTDQTLGVLVEALRTDHPLRALWEFSNNWTAGALITELTALANHRKKIRTEIA HHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVGEKVRELTLEALSRSSNDYTVPLGRVPAEVLVFLVTSSPRMVIMEQSVGMSTSHAETI HHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHH DFVERYLDKVEPRTARESAASRESDT HHHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA