| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318813
Identifier: 158318813
GI number: 158318813
Start: 8648994
End: 8652791
Strand: Direct
Name: 158318813
Synonym: Franean1_7085
Alternate gene names: NA
Gene position: 8648994-8652791 (Clockwise)
Preceding gene: 158318812
Following gene: 158318814
Centisome position: 96.29
GC content: 69.98
Gene sequence:
>3798_bases GTGCCGGCCCCGGGCGCCCTTGATGATCCGACTGGGACGGTCGTCTGCCCGTATCCGGGGCTTGCCGGATTCGATGCTGC GAGTGAGCGGTGGTTCTTCGGTCGGGAGCGGATGGTTACTGACCTGGTCGTGCGGGTGGGGGTGCGGCTGAGTGAGGGTG GTCCGCTGGTCTTGGTGGGGGCGTCCGGGTCGGGTAAGTCGTCGTTGTTGCGTGCGGGCCTGTTGCCGGTTCTGGCACGT GGGGTGGTCGCAGGGTCGGACTCTTGGCCGCAGGTGTTGATGACGCCGGGTGAACATCCCTTGCGGAGTCTGATCGATCA GATCGCGGCTGCCGGAATCCCTGCGGCGGCGTTGCTCAACGACGGTACGGCTGTGGTCCCGGAGGTCCCGGACCGGCTCG CCGAGCTCTTGGCGTCCCACGCGGGCGGCAGTGGCCTGGTGATCGCGGTGGACCAGTTCGAGGAGGTCTTCACCTTGTGT GACGATCTTTCGGAGCGGGAGGCATTCATTCGGGCACTGTGCGTGGCAGCGGCCTGTCGGGGTGATCGGGGGCCGGCTGC TGTGGTCGTCCTTGGTCTGCGGGCCGATTTTTACGCCCGGTGCGCTGCCTATCCGGAGTTGGTCGAGGCGCTGCAGACTG GCCAGGTGGTGGTCGGTCCGATGACGGCCGCGGAGATCCGTGACGTCGTGGTCAAGCCGGCGAGCACGGCTGGTGTTGAT GTGGAGCCGGGTCTGGTCGAGCTGCTGTTGCGTGATCTGGGGGCGGCGACGGCGGCGTCGCCGGACGGCGCGTTGAGTGG TGCGGGTGTGGTCACCGATCCCGGTTCGCTGCCGTTGCTTGCGCATGCCTTGCGTTCGGCGTGGTTCGCTCGGGACGCAT CGGGGTTGACGGTGGGGGCGTATCTGCGGATCGGCGGGTTGACCGGCGCGATCGCGCAGACGGCTGAGCGCGCCTATACG GGGTTGGACGCCGCGGCGCAGCAGGCCGCACGGCCGTTGTTGATGCGGATGGTCCGCCTCGGCGAGGGGGAACAGGACAG TAGGCGGCGGGTCCGGCGGGCGGACCTACTCGCCGCGGTGCCCGTCCGCGAGGCGGCCGCCGTGCTGGACGCGCTGATCG CGGCTTTCCTCGTGGAGGCGGACGCCGATGGCGACAGCGACAGCCTGCAGATCGCGCACGAGGCGCTGTTGTGGTCGTGG CCGCGGTTGCGGGAGTGGATGGACCTCGACCGGGCAAGCGCGGTCGCGCTGCAGCAGCTCAACGACGCGGCCGAGATCTG GGAAGCGGGGGGCCGCGATCCCTCCTACCTGTTCGGCGGGACACGGTTGGCGGCGGCCCGTGAATGGGTGGAAGCCCACC CGGGCCGTGCGCCTATGTCCCCGGTCGCTCGGGATTTCTACGACGAGAGCCTGCGGGCTGACAGCGCCGCCCAGCGGGCG GTGGTGCGGCGGACCCGGCGTCTGCGCCGGCTCGTCGCCGCGTTGACGGTCCTGGTGGTGGCGGCAGCGTCGCTGGCCGG GCTGGTCTACCGGCAGAAGACCACGGCGGCGGACGCGCGGGACCGGGCGCTGTCCCAGCGGATCGCGAGCCAGGCCGATA TCGCCCGTGATCGGAACCCGGCGATCGCGGCACAACTCAGCCTGGTCGCCTACCGCACGGCGAACACACCGGAGGCACGG GGCAGTGTGCTGTCGTCGTTCAACGGTGGTTCCGGGGTGCCAACGCGGTATCTGTTTCACCGCAACGCCGTCGGCACGGT GACCTACAGCCCGAACGGGAAGCTGATCGCGACGGGCAGCGACGACTGGACCGCGGCGATCTGGGACGCAGCCGACCCCC GCCGGTCGACCCCGCTCGCGGTCCTGCCGGGCCCGCAGGACGGGGGTCATAGCCGGGCGGTGAAGTCGGTGGCGTTCAGC CGGGACTCGAGGCTGCTCGCCACTGGTAGCGGCGACCGGACGGCCAAGATCTGGGACGTCTCGACGCCGAGCCGGCCCCG GCTGCTGGCGACTCTGCCGGAGACGACCGGGGACGTCTACGGGCTGGCGTTCAGCCCGGTCGCGGACCGGCTCGCCGTCG CCGGGTACGGCAACTCCGCGCGGATCTACGATGTGTCCGAGCCGGGCCGGCCGGCCGTGCAGGGTGCGCTCCTGATCAAC GGTGAGACGCCCTTGCACCAGGGACCGATCGACACACTCGCTTTCAGCCCGGACGGTTACATTCTCGCCGCCGGTGACGA GGCCGCATCCACGGTGCTCTGGTATGTCGGACCAGCCCTGGACATCATGCCGGTCGACCTGCTCAACGTGCCCGACGACG ATCCGACCGCGGACCGGGTCGGCACGATCCGGGCTGTAGCGTTCGGTCCCGATGGCAGAAGCGTCTACACCGCGGGGGTC GCAGGCCGGATCCGGGTATTCAGCGGACCGGATCTGCTCCACCTGACCCATACCGCGACCATGGGTGTTGGGAACGGGCC GATGGCCGCGCTCGCGGTCGCGCCGACCGGTGGGCTGGTCGCCGTGGGTGGAAACCTGTTCAGCGGTGTTCCGCTGTTCG ATCCCGCCGCCGCCACACAGCAAGCCGTCCTCAGCGATCCCTCCGACGGGGCGAGAGCGCTTACTTTCCTCAATGAGGGC ACGGTGACCTGGACGGTCGCGTTCAGCCCCGACGGGCGCCACCTCGCCAGCGGATCCGCGGATGGCGCACTGCGGGTCTG GGAGATCCCAGGGCCGGCGCTGATCGGCCGTCACGGCGACCAGAAGTCGGCCGAGGTCAACCCGCGCACCGGCGACGTCG TCACAGTGACCGACTCGGCGGCGGAACTCTGGAACATCACCGACCCGTACCGTCCCACCTCGCTGTCGGTCATCACCGAC GCCCTGGCCGACGAGTACGACCTCACGACTAGTGCGGCGTTCCATCCCGACGGCCGCATCCTGGCTGTCGGGACGGCGAA GCGGGTTTGTCTCTACGACATCACGGATCCGAGGCGACCATTCATGATCACTGCGTTTGAAGGGCCGGCCGGCGGGGTGT TCTCCCTGCGTTTCAGCCCGGACGGCCGGACTCTCGTCCTCGGTGGTCTCGGCTCGTCACCAGCGCCTGCCTTTTCCGCC AGTCTGGAGACCTGGGACGTGCGTGACCCGCGGCATCCGGCCAGGCTTGCCAGCACGGTCGCGCACCGCGGCAGCGTGCG GGACATCCAGTTCAGCGAGGACGGACACGTCATGGCGTCCGTAGCCGATCGCACCGTGCAGCTGTGGGACGTCAGCGATC CGCGCCGGATCGCCGCCCGGGCGACCCTGCCGGACTTCCCCGGCGCGGCGCTGCGCGCTGCGTTCGCCCCGGACGGCCGG ACCCTCGCGGTCGGCGGCGGAGGACCCTACGCGACCCTGTGGAACATCACCGACCCGGCGCGGCCGACCCGGACCGCATC GCTGCCCGGCCACGTCAGCGAGGTCAACACCGTGACGTTTAGCCCCGACGGTCGCACGCTCGTGACCGGCAGCGGGGACA ACTCGGTGCGGGTCTGGGACGTCCGCCGTCCCTCGAATCCGAGGTTGGTCGAACGGTTGAGCCGTTCCGCCGGCACCAAC AGCGGGATCGGCACGGTTGCCTTCTCCCGGGACGGATCCACCCTGGTCGGTGTCGTCTTCACCGAACCAGGAGCACTGTG GGACCTGGACGTGGACCGGGTCGCGCAACGCATCTGCGCGCAGGCCGGGGTCGGCATCACCAGGGATGAATGGGCGCGTT TCCTTCCGGACAGGGCCTACGATCCGCCGTGTGACTGA
Upstream 100 bases:
>100_bases TCCCACCCGTATCCTCGGCGTTCCCTCGGACCAGCCGCCGCTAGCTGGGGAGGCTGCGCCTGCTCTGCCGGTTCAGCCTG TTCCGGGGTCCTCGGCTCTG
Downstream 100 bases:
>100_bases ACCAGGGGCCGCGGCGCTTCCCCTGCCCGTGTCGTCCCCGGTACCGGGGTACCGGGGACGACACGGGCAGCGGCCAGGTG GGTGGCGCTGTCGGAGCACC
Product: WD-40 repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1265; Mature: 1264
Protein sequence:
>1265_residues MPAPGALDDPTGTVVCPYPGLAGFDAASERWFFGRERMVTDLVVRVGVRLSEGGPLVLVGASGSGKSSLLRAGLLPVLAR GVVAGSDSWPQVLMTPGEHPLRSLIDQIAAAGIPAAALLNDGTAVVPEVPDRLAELLASHAGGSGLVIAVDQFEEVFTLC DDLSEREAFIRALCVAAACRGDRGPAAVVVLGLRADFYARCAAYPELVEALQTGQVVVGPMTAAEIRDVVVKPASTAGVD VEPGLVELLLRDLGAATAASPDGALSGAGVVTDPGSLPLLAHALRSAWFARDASGLTVGAYLRIGGLTGAIAQTAERAYT GLDAAAQQAARPLLMRMVRLGEGEQDSRRRVRRADLLAAVPVREAAAVLDALIAAFLVEADADGDSDSLQIAHEALLWSW PRLREWMDLDRASAVALQQLNDAAEIWEAGGRDPSYLFGGTRLAAAREWVEAHPGRAPMSPVARDFYDESLRADSAAQRA VVRRTRRLRRLVAALTVLVVAAASLAGLVYRQKTTAADARDRALSQRIASQADIARDRNPAIAAQLSLVAYRTANTPEAR GSVLSSFNGGSGVPTRYLFHRNAVGTVTYSPNGKLIATGSDDWTAAIWDAADPRRSTPLAVLPGPQDGGHSRAVKSVAFS RDSRLLATGSGDRTAKIWDVSTPSRPRLLATLPETTGDVYGLAFSPVADRLAVAGYGNSARIYDVSEPGRPAVQGALLIN GETPLHQGPIDTLAFSPDGYILAAGDEAASTVLWYVGPALDIMPVDLLNVPDDDPTADRVGTIRAVAFGPDGRSVYTAGV AGRIRVFSGPDLLHLTHTATMGVGNGPMAALAVAPTGGLVAVGGNLFSGVPLFDPAAATQQAVLSDPSDGARALTFLNEG TVTWTVAFSPDGRHLASGSADGALRVWEIPGPALIGRHGDQKSAEVNPRTGDVVTVTDSAAELWNITDPYRPTSLSVITD ALADEYDLTTSAAFHPDGRILAVGTAKRVCLYDITDPRRPFMITAFEGPAGGVFSLRFSPDGRTLVLGGLGSSPAPAFSA SLETWDVRDPRHPARLASTVAHRGSVRDIQFSEDGHVMASVADRTVQLWDVSDPRRIAARATLPDFPGAALRAAFAPDGR TLAVGGGGPYATLWNITDPARPTRTASLPGHVSEVNTVTFSPDGRTLVTGSGDNSVRVWDVRRPSNPRLVERLSRSAGTN SGIGTVAFSRDGSTLVGVVFTEPGALWDLDVDRVAQRICAQAGVGITRDEWARFLPDRAYDPPCD
Sequences:
>Translated_1265_residues MPAPGALDDPTGTVVCPYPGLAGFDAASERWFFGRERMVTDLVVRVGVRLSEGGPLVLVGASGSGKSSLLRAGLLPVLAR GVVAGSDSWPQVLMTPGEHPLRSLIDQIAAAGIPAAALLNDGTAVVPEVPDRLAELLASHAGGSGLVIAVDQFEEVFTLC DDLSEREAFIRALCVAAACRGDRGPAAVVVLGLRADFYARCAAYPELVEALQTGQVVVGPMTAAEIRDVVVKPASTAGVD VEPGLVELLLRDLGAATAASPDGALSGAGVVTDPGSLPLLAHALRSAWFARDASGLTVGAYLRIGGLTGAIAQTAERAYT GLDAAAQQAARPLLMRMVRLGEGEQDSRRRVRRADLLAAVPVREAAAVLDALIAAFLVEADADGDSDSLQIAHEALLWSW PRLREWMDLDRASAVALQQLNDAAEIWEAGGRDPSYLFGGTRLAAAREWVEAHPGRAPMSPVARDFYDESLRADSAAQRA VVRRTRRLRRLVAALTVLVVAAASLAGLVYRQKTTAADARDRALSQRIASQADIARDRNPAIAAQLSLVAYRTANTPEAR GSVLSSFNGGSGVPTRYLFHRNAVGTVTYSPNGKLIATGSDDWTAAIWDAADPRRSTPLAVLPGPQDGGHSRAVKSVAFS RDSRLLATGSGDRTAKIWDVSTPSRPRLLATLPETTGDVYGLAFSPVADRLAVAGYGNSARIYDVSEPGRPAVQGALLIN GETPLHQGPIDTLAFSPDGYILAAGDEAASTVLWYVGPALDIMPVDLLNVPDDDPTADRVGTIRAVAFGPDGRSVYTAGV AGRIRVFSGPDLLHLTHTATMGVGNGPMAALAVAPTGGLVAVGGNLFSGVPLFDPAAATQQAVLSDPSDGARALTFLNEG TVTWTVAFSPDGRHLASGSADGALRVWEIPGPALIGRHGDQKSAEVNPRTGDVVTVTDSAAELWNITDPYRPTSLSVITD ALADEYDLTTSAAFHPDGRILAVGTAKRVCLYDITDPRRPFMITAFEGPAGGVFSLRFSPDGRTLVLGGLGSSPAPAFSA SLETWDVRDPRHPARLASTVAHRGSVRDIQFSEDGHVMASVADRTVQLWDVSDPRRIAARATLPDFPGAALRAAFAPDGR TLAVGGGGPYATLWNITDPARPTRTASLPGHVSEVNTVTFSPDGRTLVTGSGDNSVRVWDVRRPSNPRLVERLSRSAGTN SGIGTVAFSRDGSTLVGVVFTEPGALWDLDVDRVAQRICAQAGVGITRDEWARFLPDRAYDPPCD >Mature_1264_residues PAPGALDDPTGTVVCPYPGLAGFDAASERWFFGRERMVTDLVVRVGVRLSEGGPLVLVGASGSGKSSLLRAGLLPVLARG VVAGSDSWPQVLMTPGEHPLRSLIDQIAAAGIPAAALLNDGTAVVPEVPDRLAELLASHAGGSGLVIAVDQFEEVFTLCD DLSEREAFIRALCVAAACRGDRGPAAVVVLGLRADFYARCAAYPELVEALQTGQVVVGPMTAAEIRDVVVKPASTAGVDV EPGLVELLLRDLGAATAASPDGALSGAGVVTDPGSLPLLAHALRSAWFARDASGLTVGAYLRIGGLTGAIAQTAERAYTG LDAAAQQAARPLLMRMVRLGEGEQDSRRRVRRADLLAAVPVREAAAVLDALIAAFLVEADADGDSDSLQIAHEALLWSWP RLREWMDLDRASAVALQQLNDAAEIWEAGGRDPSYLFGGTRLAAAREWVEAHPGRAPMSPVARDFYDESLRADSAAQRAV VRRTRRLRRLVAALTVLVVAAASLAGLVYRQKTTAADARDRALSQRIASQADIARDRNPAIAAQLSLVAYRTANTPEARG SVLSSFNGGSGVPTRYLFHRNAVGTVTYSPNGKLIATGSDDWTAAIWDAADPRRSTPLAVLPGPQDGGHSRAVKSVAFSR DSRLLATGSGDRTAKIWDVSTPSRPRLLATLPETTGDVYGLAFSPVADRLAVAGYGNSARIYDVSEPGRPAVQGALLING ETPLHQGPIDTLAFSPDGYILAAGDEAASTVLWYVGPALDIMPVDLLNVPDDDPTADRVGTIRAVAFGPDGRSVYTAGVA GRIRVFSGPDLLHLTHTATMGVGNGPMAALAVAPTGGLVAVGGNLFSGVPLFDPAAATQQAVLSDPSDGARALTFLNEGT VTWTVAFSPDGRHLASGSADGALRVWEIPGPALIGRHGDQKSAEVNPRTGDVVTVTDSAAELWNITDPYRPTSLSVITDA LADEYDLTTSAAFHPDGRILAVGTAKRVCLYDITDPRRPFMITAFEGPAGGVFSLRFSPDGRTLVLGGLGSSPAPAFSAS LETWDVRDPRHPARLASTVAHRGSVRDIQFSEDGHVMASVADRTVQLWDVSDPRRIAARATLPDFPGAALRAAFAPDGRT LAVGGGGPYATLWNITDPARPTRTASLPGHVSEVNTVTFSPDGRTLVTGSGDNSVRVWDVRRPSNPRLVERLSRSAGTNS GIGTVAFSRDGSTLVGVVFTEPGALWDLDVDRVAQRICAQAGVGITRDEWARFLPDRAYDPPCD
Specific function: Unknown
COG id: COG2319
COG function: function code R; FOG: WD40 repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 13 WD repeats [H]
Homologues:
Organism=Homo sapiens, GI16554629, Length=230, Percent_Identity=27.3913043478261, Blast_Score=87, Evalue=7e-17, Organism=Homo sapiens, GI16554627, Length=230, Percent_Identity=27.3913043478261, Blast_Score=87, Evalue=7e-17, Organism=Homo sapiens, GI26665869, Length=248, Percent_Identity=27.8225806451613, Blast_Score=84, Evalue=6e-16, Organism=Homo sapiens, GI113865883, Length=228, Percent_Identity=29.3859649122807, Blast_Score=83, Evalue=1e-15, Organism=Homo sapiens, GI21536371, Length=610, Percent_Identity=24.4262295081967, Blast_Score=83, Evalue=2e-15, Organism=Homo sapiens, GI11055998, Length=216, Percent_Identity=27.3148148148148, Blast_Score=81, Evalue=8e-15, Organism=Homo sapiens, GI20357529, Length=217, Percent_Identity=28.110599078341, Blast_Score=80, Evalue=1e-14, Organism=Homo sapiens, GI21071067, Length=311, Percent_Identity=27.0096463022508, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI23199987, Length=269, Percent_Identity=24.5353159851301, Blast_Score=77, Evalue=1e-13, Organism=Homo sapiens, GI239787754, Length=185, Percent_Identity=32.4324324324324, Blast_Score=77, Evalue=1e-13, Organism=Homo sapiens, GI239787764, Length=185, Percent_Identity=32.4324324324324, Blast_Score=77, Evalue=1e-13, Organism=Homo sapiens, GI83779014, Length=218, Percent_Identity=27.5229357798165, Blast_Score=77, Evalue=1e-13, Organism=Homo sapiens, GI115298668, Length=379, Percent_Identity=23.4828496042216, Blast_Score=74, Evalue=9e-13, Organism=Homo sapiens, GI11321585, Length=225, Percent_Identity=27.1111111111111, Blast_Score=74, Evalue=1e-12, Organism=Homo sapiens, GI70909324, Length=210, Percent_Identity=27.1428571428571, Blast_Score=73, Evalue=2e-12, Organism=Homo sapiens, GI239787760, Length=185, Percent_Identity=32.4324324324324, Blast_Score=73, Evalue=2e-12, Organism=Homo sapiens, GI32189425, Length=344, Percent_Identity=21.5116279069767, Blast_Score=73, Evalue=2e-12, Organism=Homo sapiens, GI62234461, Length=129, Percent_Identity=35.6589147286822, Blast_Score=72, Evalue=4e-12, Organism=Homo sapiens, GI62234438, Length=129, Percent_Identity=35.6589147286822, Blast_Score=72, Evalue=4e-12, Organism=Homo sapiens, GI4757988, Length=177, Percent_Identity=29.9435028248588, Blast_Score=71, Evalue=6e-12, Organism=Homo sapiens, GI24431950, Length=311, Percent_Identity=25.7234726688103, Blast_Score=71, Evalue=6e-12, Organism=Homo sapiens, GI18677720, Length=207, Percent_Identity=28.0193236714976, Blast_Score=70, Evalue=1e-11, Organism=Homo sapiens, GI7657439, Length=166, Percent_Identity=30.1204819277108, Blast_Score=70, Evalue=1e-11, Organism=Homo sapiens, GI20143912, Length=193, Percent_Identity=28.4974093264249, Blast_Score=70, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17534675, Length=218, Percent_Identity=27.5229357798165, Blast_Score=81, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71990665, Length=211, Percent_Identity=25.1184834123223, Blast_Score=74, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17552164, Length=228, Percent_Identity=24.1228070175439, Blast_Score=72, Evalue=2e-12, Organism=Caenorhabditis elegans, GI115533709, Length=184, Percent_Identity=30.9782608695652, Blast_Score=67, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6319675, Length=227, Percent_Identity=29.5154185022026, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324322, Length=265, Percent_Identity=24.1509433962264, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864654, Length=230, Percent_Identity=27.3913043478261, Blast_Score=87, Evalue=9e-17, Organism=Drosophila melanogaster, GI24666913, Length=302, Percent_Identity=22.8476821192053, Blast_Score=78, Evalue=4e-14, Organism=Drosophila melanogaster, GI45555412, Length=218, Percent_Identity=25.6880733944954, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI45555420, Length=218, Percent_Identity=25.6880733944954, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI45555433, Length=218, Percent_Identity=25.6880733944954, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI45555444, Length=218, Percent_Identity=25.6880733944954, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI17933598, Length=218, Percent_Identity=25.6880733944954, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI24642327, Length=218, Percent_Identity=25.6880733944954, Blast_Score=77, Evalue=1e-13, Organism=Drosophila melanogaster, GI45549090, Length=136, Percent_Identity=33.8235294117647, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24663767, Length=231, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=3e-13, Organism=Drosophila melanogaster, GI17136870, Length=383, Percent_Identity=24.0208877284595, Blast_Score=73, Evalue=2e-12, Organism=Drosophila melanogaster, GI20129125, Length=220, Percent_Identity=26.8181818181818, Blast_Score=73, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020472 - InterPro: IPR011600 - InterPro: IPR015943 - InterPro: IPR001680 - InterPro: IPR011046 - InterPro: IPR019782 - InterPro: IPR019775 - InterPro: IPR017986 - InterPro: IPR019781 [H]
Pfam domain/function: PF00656 Peptidase_C14; PF00400 WD40 [H]
EC number: NA
Molecular weight: Translated: 132660; Mature: 132529
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS00678 WD_REPEATS_1 ; PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPGALDDPTGTVVCPYPGLAGFDAASERWFFGRERMVTDLVVRVGVRLSEGGPLVLVG CCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCEECCCCCEEEEE ASGSGKSSLLRAGLLPVLARGVVAGSDSWPQVLMTPGEHPLRSLIDQIAAAGIPAAALLN CCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHCC DGTAVVPEVPDRLAELLASHAGGSGLVIAVDQFEEVFTLCDDLSEREAFIRALCVAAACR CCCEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC GDRGPAAVVVLGLRADFYARCAAYPELVEALQTGQVVVGPMTAAEIRDVVVKPASTAGVD CCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCC VEPGLVELLLRDLGAATAASPDGALSGAGVVTDPGSLPLLAHALRSAWFARDASGLTVGA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEE YLRIGGLTGAIAQTAERAYTGLDAAAQQAARPLLMRMVRLGEGEQDSRRRVRRADLLAAV EEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC PVREAAAVLDALIAAFLVEADADGDSDSLQIAHEALLWSWPRLREWMDLDRASAVALQQL CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHH NDAAEIWEAGGRDPSYLFGGTRLAAAREWVEAHPGRAPMSPVARDFYDESLRADSAAQRA HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHH VVRRTRRLRRLVAALTVLVVAAASLAGLVYRQKTTAADARDRALSQRIASQADIARDRNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC AIAAQLSLVAYRTANTPEARGSVLSSFNGGSGVPTRYLFHRNAVGTVTYSPNGKLIATGS CCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEECC DDWTAAIWDAADPRRSTPLAVLPGPQDGGHSRAVKSVAFSRDSRLLATGSGDRTAKIWDV CCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEC STPSRPRLLATLPETTGDVYGLAFSPVADRLAVAGYGNSARIYDVSEPGRPAVQGALLIN CCCCCCEEEEECCCCCCCEEEEEECCHHHHEEEEECCCCCEEEECCCCCCCCEEEEEEEC GETPLHQGPIDTLAFSPDGYILAAGDEAASTVLWYVGPALDIMPVDLLNVPDDDPTADRV CCCCCCCCCCCCEEECCCCEEEEECCCHHCEEEEEECCCCCEEEEEEECCCCCCCCCHHC GTIRAVAFGPDGRSVYTAGVAGRIRVFSGPDLLHLTHTATMGVGNGPMAALAVAPTGGLV CEEEEEEECCCCCEEEEECCCCEEEEECCCCEEEEEEEEEECCCCCCEEEEEEECCCCEE AVGGNLFSGVPLFDPAAATQQAVLSDPSDGARALTFLNEGTVTWTVAFSPDGRHLASGSA EECCCHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEEECCCCCEECCCCC DGALRVWEIPGPALIGRHGDQKSAEVNPRTGDVVTVTDSAAELWNITDPYRPTSLSVITD CCCEEEEECCCCCEECCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCHHHHHHH ALADEYDLTTSAAFHPDGRILAVGTAKRVCLYDITDPRRPFMITAFEGPAGGVFSLRFSP HHHCCCCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECC DGRTLVLGGLGSSPAPAFSASLETWDVRDPRHPARLASTVAHRGSVRDIQFSEDGHVMAS CCCEEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEE VADRTVQLWDVSDPRRIAARATLPDFPGAALRAAFAPDGRTLAVGGGGPYATLWNITDPA ECCCEEEEEECCCCHHHEEECCCCCCCCHHHEEEECCCCCEEEEECCCCEEEEEECCCCC RPTRTASLPGHVSEVNTVTFSPDGRTLVTGSGDNSVRVWDVRRPSNPRLVERLSRSAGTN CCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCC SGIGTVAFSRDGSTLVGVVFTEPGALWDLDVDRVAQRICAQAGVGITRDEWARFLPDRAY CCCEEEEEECCCCEEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC DPPCD CCCCC >Mature Secondary Structure PAPGALDDPTGTVVCPYPGLAGFDAASERWFFGRERMVTDLVVRVGVRLSEGGPLVLVG CCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCEECCCCCEEEEE ASGSGKSSLLRAGLLPVLARGVVAGSDSWPQVLMTPGEHPLRSLIDQIAAAGIPAAALLN CCCCCHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHCC DGTAVVPEVPDRLAELLASHAGGSGLVIAVDQFEEVFTLCDDLSEREAFIRALCVAAACR CCCEECCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC GDRGPAAVVVLGLRADFYARCAAYPELVEALQTGQVVVGPMTAAEIRDVVVKPASTAGVD CCCCCEEEEEEECCHHHHHHHHCCHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCC VEPGLVELLLRDLGAATAASPDGALSGAGVVTDPGSLPLLAHALRSAWFARDASGLTVGA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEE YLRIGGLTGAIAQTAERAYTGLDAAAQQAARPLLMRMVRLGEGEQDSRRRVRRADLLAAV EEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC PVREAAAVLDALIAAFLVEADADGDSDSLQIAHEALLWSWPRLREWMDLDRASAVALQQL CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHH NDAAEIWEAGGRDPSYLFGGTRLAAAREWVEAHPGRAPMSPVARDFYDESLRADSAAQRA HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHH VVRRTRRLRRLVAALTVLVVAAASLAGLVYRQKTTAADARDRALSQRIASQADIARDRNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC AIAAQLSLVAYRTANTPEARGSVLSSFNGGSGVPTRYLFHRNAVGTVTYSPNGKLIATGS CCEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEECC DDWTAAIWDAADPRRSTPLAVLPGPQDGGHSRAVKSVAFSRDSRLLATGSGDRTAKIWDV CCCEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEC STPSRPRLLATLPETTGDVYGLAFSPVADRLAVAGYGNSARIYDVSEPGRPAVQGALLIN CCCCCCEEEEECCCCCCCEEEEEECCHHHHEEEEECCCCCEEEECCCCCCCCEEEEEEEC GETPLHQGPIDTLAFSPDGYILAAGDEAASTVLWYVGPALDIMPVDLLNVPDDDPTADRV CCCCCCCCCCCCEEECCCCEEEEECCCHHCEEEEEECCCCCEEEEEEECCCCCCCCCHHC GTIRAVAFGPDGRSVYTAGVAGRIRVFSGPDLLHLTHTATMGVGNGPMAALAVAPTGGLV CEEEEEEECCCCCEEEEECCCCEEEEECCCCEEEEEEEEEECCCCCCEEEEEEECCCCEE AVGGNLFSGVPLFDPAAATQQAVLSDPSDGARALTFLNEGTVTWTVAFSPDGRHLASGSA EECCCHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEEECCCCCEECCCCC DGALRVWEIPGPALIGRHGDQKSAEVNPRTGDVVTVTDSAAELWNITDPYRPTSLSVITD CCCEEEEECCCCCEECCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCHHHHHHH ALADEYDLTTSAAFHPDGRILAVGTAKRVCLYDITDPRRPFMITAFEGPAGGVFSLRFSP HHHCCCCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECC DGRTLVLGGLGSSPAPAFSASLETWDVRDPRHPARLASTVAHRGSVRDIQFSEDGHVMAS CCCEEEEECCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEE VADRTVQLWDVSDPRRIAARATLPDFPGAALRAAFAPDGRTLAVGGGGPYATLWNITDPA ECCCEEEEEECCCCHHHEEECCCCCCCCHHHEEEECCCCCEEEEECCCCEEEEEECCCCC RPTRTASLPGHVSEVNTVTFSPDGRTLVTGSGDNSVRVWDVRRPSNPRLVERLSRSAGTN CCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCC SGIGTVAFSRDGSTLVGVVFTEPGALWDLDVDRVAQRICAQAGVGITRDEWARFLPDRAY CCCEEEEEECCCCEEEEEEEECCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC DPPCD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]