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The map label for this gene is 158318812

Identifier: 158318812

GI number: 158318812

Start: 8647598

End: 8648107

Strand: Direct

Name: 158318812

Synonym: Franean1_7084

Alternate gene names: NA

Gene position: 8647598-8648107 (Clockwise)

Preceding gene: 158318808

Following gene: 158318813

Centisome position: 96.28

GC content: 67.65

Gene sequence:

>510_bases
TTGCTCGTCGACGCCGCGCGGCCCTGCCGACACAGCCCTGGGGACAGGTGGTACGTCGACGAGACCTACGTCAAGGTCGC
CGGCCACTGGACCTACCTGTACAGGGCGGTTGACCAGCACGGGCAGGTCATCGATGTCCTCGCCAGCACCCGTCGCGATC
AGGCTGCGGCACGCCGGTTCTTCACCGCGGCGCTGTCTCACGGGCGCCGGCCAGTCGAGGTCACCACCGACAAGGCCCCC
GTCTACCCAAGGCTCCTCGACGAGCTGCTCCCCGAAGCCTGCCATGTCGGCGCCGCGCGGGAGAACAACCGGATCGAAGC
CGATCACGGCCGACTCAAAGCCCGGCTCCGGCCGATGCGCGGACTGAAACGGCTGCGTTCCGTCCAGACGATCAGCGCTG
GCCATGCGTTCGTTCAGAACATCCGCCGCGGCCACTACGAACTCGGGATCGACACCGACCCGCACGCACGGCTGACAGCC
GCGTTTACCGAGCTCACCCTCACGATCTGA

Upstream 100 bases:

>100_bases
CGTGATCATCATTCGAGAACGACCAAGGACTCGATGAGGCGGCATCGACGTTGACCACGTCACCGTCTACCGGTGCCTCG
CGGTCCAACGCTTCACGCCC

Downstream 100 bases:

>100_bases
TCACCCGCTCGACAGGGCCAACCACGCCCTGCCATCCCGCAATGCAACAGACCCCGCCGAAGAAACGGAAGAAGGCGAAG
ACCGCCCCGGTCGCGCCTCC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MLVDAARPCRHSPGDRWYVDETYVKVAGHWTYLYRAVDQHGQVIDVLASTRRDQAAARRFFTAALSHGRRPVEVTTDKAP
VYPRLLDELLPEACHVGAARENNRIEADHGRLKARLRPMRGLKRLRSVQTISAGHAFVQNIRRGHYELGIDTDPHARLTA
AFTELTLTI

Sequences:

>Translated_169_residues
MLVDAARPCRHSPGDRWYVDETYVKVAGHWTYLYRAVDQHGQVIDVLASTRRDQAAARRFFTAALSHGRRPVEVTTDKAP
VYPRLLDELLPEACHVGAARENNRIEADHGRLKARLRPMRGLKRLRSVQTISAGHAFVQNIRRGHYELGIDTDPHARLTA
AFTELTLTI
>Mature_169_residues
MLVDAARPCRHSPGDRWYVDETYVKVAGHWTYLYRAVDQHGQVIDVLASTRRDQAAARRFFTAALSHGRRPVEVTTDKAP
VYPRLLDELLPEACHVGAARENNRIEADHGRLKARLRPMRGLKRLRSVQTISAGHAFVQNIRRGHYELGIDTDPHARLTA
AFTELTLTI

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 19159; Mature: 19159

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVDAARPCRHSPGDRWYVDETYVKVAGHWTYLYRAVDQHGQVIDVLASTRRDQAAARRF
CCCCCCCCCCCCCCCEEEECHHHEEHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
FTAALSHGRRPVEVTTDKAPVYPRLLDELLPEACHVGAARENNRIEADHGRLKARLRPMR
HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHH
GLKRLRSVQTISAGHAFVQNIRRGHYELGIDTDPHARLTAAFTELTLTI
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHEEEEEC
>Mature Secondary Structure
MLVDAARPCRHSPGDRWYVDETYVKVAGHWTYLYRAVDQHGQVIDVLASTRRDQAAARRF
CCCCCCCCCCCCCCCEEEECHHHEEHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHH
FTAALSHGRRPVEVTTDKAPVYPRLLDELLPEACHVGAARENNRIEADHGRLKARLRPMR
HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHH
GLKRLRSVQTISAGHAFVQNIRRGHYELGIDTDPHARLTAAFTELTLTI
HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]