| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318773
Identifier: 158318773
GI number: 158318773
Start: 8595190
End: 8595486
Strand: Reverse
Name: 158318773
Synonym: Franean1_7044
Alternate gene names: NA
Gene position: 8595486-8595190 (Counterclockwise)
Preceding gene: 158318774
Following gene: 158318772
Centisome position: 95.7
GC content: 63.3
Gene sequence:
>297_bases ATGGAATCGCGTCGTAGGTTCGATCGGGAGTTCAAGGAAGGCGCTGTCCGTATCGTTCTCGAGACAGAGAAGCCGGTCGC AGCTGTGGCCCGTGACCTGGGAGTTCACGAGGCAACGCTGGGAAACTGGGTGAACGCGGCGCGTCGTAGGGAAAAGAAGG GCGAACTGTCCGAGGACGAGAGGGTCGAGCTGGAGCGGCTGCGGGCGGAGAACGCGAGACTCACGATGGAGCGTGATGTC CTCAAGCGATCTGTGGCCCTCTGGGTGAACGAGGCGATGGGCCGGACGGCCCGGTAG
Upstream 100 bases:
>100_bases CGTGAGTCGGTCTGAACACCACCCCGTCCGAGGGATGCCCTGGGGTGAGTTTCCCCTCTGAGCGTGGAGAACATCACGGA CAGAGGATGAGGCGATTGTC
Downstream 100 bases:
>100_bases AACTGGCCGGGTTCATCGTTTCCCAGAGGGCCGAGCATCAGGTTCCGTACCGGCTGTCGTGCCGGCTGCTGAACGTCTCC GAGTCCTGGTTCTACAAGTG
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: Transposase IS3/IS; Transposase OrfA IS3 Family
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MESRRRFDREFKEGAVRIVLETEKPVAAVARDLGVHEATLGNWVNAARRREKKGELSEDERVELERLRAENARLTMERDV LKRSVALWVNEAMGRTAR
Sequences:
>Translated_98_residues MESRRRFDREFKEGAVRIVLETEKPVAAVARDLGVHEATLGNWVNAARRREKKGELSEDERVELERLRAENARLTMERDV LKRSVALWVNEAMGRTAR >Mature_98_residues MESRRRFDREFKEGAVRIVLETEKPVAAVARDLGVHEATLGNWVNAARRREKKGELSEDERVELERLRAENARLTMERDV LKRSVALWVNEAMGRTAR
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11389; Mature: 11389
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESRRRFDREFKEGAVRIVLETEKPVAAVARDLGVHEATLGNWVNAARRREKKGELSEDE CCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHH RVELERLRAENARLTMERDVLKRSVALWVNEAMGRTAR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MESRRRFDREFKEGAVRIVLETEKPVAAVARDLGVHEATLGNWVNAARRREKKGELSEDE CCCHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHH RVELERLRAENARLTMERDVLKRSVALWVNEAMGRTAR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA