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The map label for this gene is nisX1 [H]

Identifier: 158318772

GI number: 158318772

Start: 8594555

End: 8595070

Strand: Reverse

Name: nisX1 [H]

Synonym: Franean1_7043

Alternate gene names: 158318772

Gene position: 8595070-8594555 (Counterclockwise)

Preceding gene: 158318773

Following gene: 158318771

Centisome position: 95.69

GC content: 73.84

Gene sequence:

>516_bases
GTGCGCCGGGCGCGGCGGCGGACGCTCGCGGAGACGGTGCGTTGGCTGTTCCACCTGCACCGCGGTCTCTACGGGTCGCC
GCGGATCACCGCGGAACTGCGCGCTCGGGGCTGGTCGGTGTCGAAGAACACCGTCGCGGCGCTGATGGCCGAACTCGGCC
TGACCGCCCGCCGGCGCCGGCGCCGCCGCGGCCTGACCAAAGCCGACAGGCGGGCCGCGAAGCCCCCGGACCTGGTCCGG
CGCCGTTTCCACCCGCCCGAGGCCCCTGACCGGTTCTGGGTCGGGGACCTGACCGAGATCCCGAACAGCGAGGGTCGGCT
CTACCTCGCCTCGGTCCTGGACCTACACAGCCGCCGAATCGTCGGGTTCGCCCTCGGCACCCGCCATAACCCCGCCCTGG
CCACTGCCGCGCTGCGCACCGCCGTCACCGCCCGCGGCGGCCACGTCGACGGCGTCGTCCTGCACACCGACCAGGGCGGT
GAATACACCGCCACCGACTTCGCTGACACCTGCTGA

Upstream 100 bases:

>100_bases
TTCCCAGAGGGCCGAGCATCAGGTTCCGTACCGGCTGTCGTGCCGGCTGCTGAACGTCTCCGAGTCCTGGTTCTACAAGT
GGCGGCATGGTGACCGGTCA

Downstream 100 bases:

>100_bases
AAATCAGGCGTCACCCAGTCGATGGGACGCACCGGCAGCGCACTCGACAACGCCGTCATCGAATCGTGGCACTCCACCCT
CGAATGCGAGCTCCTCGCCC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRRARRRTLAETVRWLFHLHRGLYGSPRITAELRARGWSVSKNTVAALMAELGLTARRRRRRRGLTKADRRAAKPPDLVR
RRFHPPEAPDRFWVGDLTEIPNSEGRLYLASVLDLHSRRIVGFALGTRHNPALATAALRTAVTARGGHVDGVVLHTDQGG
EYTATDFADTC

Sequences:

>Translated_171_residues
MRRARRRTLAETVRWLFHLHRGLYGSPRITAELRARGWSVSKNTVAALMAELGLTARRRRRRRGLTKADRRAAKPPDLVR
RRFHPPEAPDRFWVGDLTEIPNSEGRLYLASVLDLHSRRIVGFALGTRHNPALATAALRTAVTARGGHVDGVVLHTDQGG
EYTATDFADTC
>Mature_171_residues
MRRARRRTLAETVRWLFHLHRGLYGSPRITAELRARGWSVSKNTVAALMAELGLTARRRRRRRGLTKADRRAAKPPDLVR
RRFHPPEAPDRFWVGDLTEIPNSEGRLYLASVLDLHSRRIVGFALGTRHNPALATAALRTAVTARGGHVDGVVLHTDQGG
EYTATDFADTC

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=160, Percent_Identity=31.875, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788405, Length=147, Percent_Identity=37.4149659863946, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787263, Length=147, Percent_Identity=37.4149659863946, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786753, Length=147, Percent_Identity=37.4149659863946, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786570, Length=147, Percent_Identity=37.4149659863946, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786490, Length=147, Percent_Identity=37.4149659863946, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1789981, Length=151, Percent_Identity=30.4635761589404, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 19210; Mature: 19210

Theoretical pI: Translated: 12.09; Mature: 12.09

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRARRRTLAETVRWLFHLHRGLYGSPRITAELRARGWSVSKNTVAALMAELGLTARRRR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHH
RRRGLTKADRRAAKPPDLVRRRFHPPEAPDRFWVGDLTEIPNSEGRLYLASVLDLHSRRI
HHCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEHHHHHHHHHCEE
VGFALGTRHNPALATAALRTAVTARGGHVDGVVLHTDQGGEYTATDFADTC
EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCCCC
>Mature Secondary Structure
MRRARRRTLAETVRWLFHLHRGLYGSPRITAELRARGWSVSKNTVAALMAELGLTARRRR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHH
RRRGLTKADRRAAKPPDLVRRRFHPPEAPDRFWVGDLTEIPNSEGRLYLASVLDLHSRRI
HHCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCEEHHHHHHHHHCEE
VGFALGTRHNPALATAALRTAVTARGGHVDGVVLHTDQGGEYTATDFADTC
EEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]