| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is insK [C]
Identifier: 158318771
GI number: 158318771
Start: 8594177
End: 8594533
Strand: Reverse
Name: insK [C]
Synonym: Franean1_7042
Alternate gene names: 158318771
Gene position: 8594533-8594177 (Counterclockwise)
Preceding gene: 158318772
Following gene: 158318770
Centisome position: 95.69
GC content: 66.95
Gene sequence:
>357_bases ATGGGACGCACCGGCAGCGCACTCGACAACGCCGTCATCGAATCGTGGCACTCCACCCTCGAATGCGAGCTCCTCGCCCG GCAGCGGTTCACCACCCGCGCCCAGGCAAAAACCGCCGTCGCCGACTACATCGACTGGTACAACACCAAACGCCGCCACT CGACCTGCGGCGGACTACCACCAGCCACCTACGAACAACAGACCCGGCCAGGCCACATGACCGTTCCAGACAAAACCACA AACGTGGAGACGGCTGACGCCGCCCCCCATCCCCGAGAACCACGTGCCGGGCCGGAAGCGCCGCGCACAGTACGAGGCCG CCCCTCCAAGGTCAAGGACCGCTCCGCGGCCGCCTGA
Upstream 100 bases:
>100_bases CGGCCACGTCGACGGCGTCGTCCTGCACACCGACCAGGGCGGTGAATACACCGCCACCGACTTCGCTGACACCTGCTGAA AATCAGGCGTCACCCAGTCG
Downstream 100 bases:
>100_bases CGGCGGTGGCCCTCCGGGCCATCCCTGACCCCGGAGCCTCTACGACCTCGCGGCCAGGACAAACAGGGCCAGGTCGGAAC CTGGCCCATCAGACGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Integrase; IS5 Family Transposase OrfB
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MGRTGSALDNAVIESWHSTLECELLARQRFTTRAQAKTAVADYIDWYNTKRRHSTCGGLPPATYEQQTRPGHMTVPDKTT NVETADAAPHPREPRAGPEAPRTVRGRPSKVKDRSAAA
Sequences:
>Translated_118_residues MGRTGSALDNAVIESWHSTLECELLARQRFTTRAQAKTAVADYIDWYNTKRRHSTCGGLPPATYEQQTRPGHMTVPDKTT NVETADAAPHPREPRAGPEAPRTVRGRPSKVKDRSAAA >Mature_117_residues GRTGSALDNAVIESWHSTLECELLARQRFTTRAQAKTAVADYIDWYNTKRRHSTCGGLPPATYEQQTRPGHMTVPDKTTN VETADAAPHPREPRAGPEAPRTVRGRPSKVKDRSAAA
Specific function: Involved in the transposition of the insertion sequence is150 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12998; Mature: 12866
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTGSALDNAVIESWHSTLECELLARQRFTTRAQAKTAVADYIDWYNTKRRHSTCGGLP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PATYEQQTRPGHMTVPDKTTNVETADAAPHPREPRAGPEAPRTVRGRPSKVKDRSAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GRTGSALDNAVIESWHSTLECELLARQRFTTRAQAKTAVADYIDWYNTKRRHSTCGGLP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PATYEQQTRPGHMTVPDKTTNVETADAAPHPREPRAGPEAPRTVRGRPSKVKDRSAAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA