| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318768
Identifier: 158318768
GI number: 158318768
Start: 8589549
End: 8590835
Strand: Reverse
Name: 158318768
Synonym: Franean1_7039
Alternate gene names: NA
Gene position: 8590835-8589549 (Counterclockwise)
Preceding gene: 158318769
Following gene: 158318767
Centisome position: 95.64
GC content: 62.94
Gene sequence:
>1287_bases ATGAAGCGTAAATCCTTTACCGGAATATTAGCAGTGACCGCCGCCGTGGCGCTTCTGCTCGCCGGGTGCGGCCAGGCGGG GAACAGCACGACGACCGCCGACGGCAGGATCCAGATACCCATGTGGACCCACTCGGCCGGCAACCCCGCCGAGCTCGCGG TGTACAAGCAGATCATCTCCGACTTCAACGAGTCGCAGGACAGGTACGAGGTAGTACAACAAGACTTTCCCCAGGTCACC TATAACGACGCGATTGTCGCGGCCGCCGCAGCGGGGGACCTGCCGTGCCTCATCGACATGGACGGACCGGTGATGCCGAA CTGGGCCTGGTCCGGCTACCTGCAGGAGCTCAATCTTCCCAAGCAGCTCACGGACAGCCTGCTGCCGACGGCGGTCGGCA CGTACAAGGGAAAGATCTATTCGGCCGGATACTGGGACGCCGCACTGGCAATTTTCGCGCGCAAGTCGGTGCTTGACAAG AACGATATCCGCATCCCCACCGTGGACAGGCCGTGGACGAAGGACGAGTTCGACTCCGCGCTCGCGACGCTGCAACAGGC CGGATACGATACTCCGCTCGACATCGGCGCGGAGGACACCGGCGAGTGGTGGTCGTACGCGTACTCCCCCATGCTGCAGA GCTTCGGTGGCGACGAAATCAATCGAGACACCTACCGCACGGCAGAGGGCGCTCTTAACGGGCCGGCTGCCGTGAACTTC TTCACGTGGTTCCAGGATGCCTTCAAGAAAGGCTGGGCAAGCAACTCCGGCACGATCGGGAACCAGGAGTTCGTCGACGA CAAGGTCGCGCTGAGCTACACGGGCGTGTGGAATGCGCTCGACTCGCTCGAAAAGATCGGCGACGACCTGCTCATCCTCC CGCCTCCGGACTTCGGCCAGGGGCCCAAGATCGGCGGTGGCTCATGGCAGTGGGGCATCACGGCCGGATGCGAGCAAGCC GACGGCGCGCGCCAGTATCTGCGGTTCAGTTTCCAGGACAAGTACATCGCGCAGTTCGCGGACAGCCAGATCGTCATCCC CGCGACGGCCGGTGCCGAGGAGCTCTCGAAGTACTTCACGGCCGATGGCGCTCTGCGCCCCTTCGTCGTGCTCTCCCAGA AGTTCGCCCTCGCGCGGCCCGCGACCCCGGCCTATTCCGTGATCTCGTCGATCTTCGAGAAGGCGACAAAGGACATCATG AACGGCGCCGATGTGAAATCCACACTCGGCAGTGCCGTGGAGGATATCGACGAGAACATCACGGCCAACGACAACTACGG CTCCTGA
Upstream 100 bases:
>100_bases ATCCAGTCGGCGGCGGACCTTTTTAGCAACCGAGTGACCGCATCAGCGGTCCCCGATCGGTTCGCGACGTGGCTGCCGCG CATCGTGAAAGGAATTCACC
Downstream 100 bases:
>100_bases TCATCTCGTTCCATCCAGGTGGGGGCCGTGCACACGGCCCCCACCCCTCACCCAGAGGTCGACGATGACGTCCTCCACCC ATGACGTGCCCCCGATCCGG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MKRKSFTGILAVTAAVALLLAGCGQAGNSTTTADGRIQIPMWTHSAGNPAELAVYKQIISDFNESQDRYEVVQQDFPQVT YNDAIVAAAAAGDLPCLIDMDGPVMPNWAWSGYLQELNLPKQLTDSLLPTAVGTYKGKIYSAGYWDAALAIFARKSVLDK NDIRIPTVDRPWTKDEFDSALATLQQAGYDTPLDIGAEDTGEWWSYAYSPMLQSFGGDEINRDTYRTAEGALNGPAAVNF FTWFQDAFKKGWASNSGTIGNQEFVDDKVALSYTGVWNALDSLEKIGDDLLILPPPDFGQGPKIGGGSWQWGITAGCEQA DGARQYLRFSFQDKYIAQFADSQIVIPATAGAEELSKYFTADGALRPFVVLSQKFALARPATPAYSVISSIFEKATKDIM NGADVKSTLGSAVEDIDENITANDNYGS
Sequences:
>Translated_428_residues MKRKSFTGILAVTAAVALLLAGCGQAGNSTTTADGRIQIPMWTHSAGNPAELAVYKQIISDFNESQDRYEVVQQDFPQVT YNDAIVAAAAAGDLPCLIDMDGPVMPNWAWSGYLQELNLPKQLTDSLLPTAVGTYKGKIYSAGYWDAALAIFARKSVLDK NDIRIPTVDRPWTKDEFDSALATLQQAGYDTPLDIGAEDTGEWWSYAYSPMLQSFGGDEINRDTYRTAEGALNGPAAVNF FTWFQDAFKKGWASNSGTIGNQEFVDDKVALSYTGVWNALDSLEKIGDDLLILPPPDFGQGPKIGGGSWQWGITAGCEQA DGARQYLRFSFQDKYIAQFADSQIVIPATAGAEELSKYFTADGALRPFVVLSQKFALARPATPAYSVISSIFEKATKDIM NGADVKSTLGSAVEDIDENITANDNYGS >Mature_428_residues MKRKSFTGILAVTAAVALLLAGCGQAGNSTTTADGRIQIPMWTHSAGNPAELAVYKQIISDFNESQDRYEVVQQDFPQVT YNDAIVAAAAAGDLPCLIDMDGPVMPNWAWSGYLQELNLPKQLTDSLLPTAVGTYKGKIYSAGYWDAALAIFARKSVLDK NDIRIPTVDRPWTKDEFDSALATLQQAGYDTPLDIGAEDTGEWWSYAYSPMLQSFGGDEINRDTYRTAEGALNGPAAVNF FTWFQDAFKKGWASNSGTIGNQEFVDDKVALSYTGVWNALDSLEKIGDDLLILPPPDFGQGPKIGGGSWQWGITAGCEQA DGARQYLRFSFQDKYIAQFADSQIVIPATAGAEELSKYFTADGALRPFVVLSQKFALARPATPAYSVISSIFEKATKDIM NGADVKSTLGSAVEDIDENITANDNYGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46393; Mature: 46393
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKSFTGILAVTAAVALLLAGCGQAGNSTTTADGRIQIPMWTHSAGNPAELAVYKQIIS CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH DFNESQDRYEVVQQDFPQVTYNDAIVAAAAAGDLPCLIDMDGPVMPNWAWSGYLQELNLP HHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHCCCC KQLTDSLLPTAVGTYKGKIYSAGYWDAALAIFARKSVLDKNDIRIPTVDRPWTKDEFDSA HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH LATLQQAGYDTPLDIGAEDTGEWWSYAYSPMLQSFGGDEINRDTYRTAEGALNGPAAVNF HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHH FTWFQDAFKKGWASNSGTIGNQEFVDDKVALSYTGVWNALDSLEKIGDDLLILPPPDFGQ HHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCEEEECCCCCCC GPKIGGGSWQWGITAGCEQADGARQYLRFSFQDKYIAQFADSQIVIPATAGAEELSKYFT CCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCHHHHHHHHH ADGALRPFVVLSQKFALARPATPAYSVISSIFEKATKDIMNGADVKSTLGSAVEDIDENI CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC TANDNYGS CCCCCCCC >Mature Secondary Structure MKRKSFTGILAVTAAVALLLAGCGQAGNSTTTADGRIQIPMWTHSAGNPAELAVYKQIIS CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH DFNESQDRYEVVQQDFPQVTYNDAIVAAAAAGDLPCLIDMDGPVMPNWAWSGYLQELNLP HHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHCCCC KQLTDSLLPTAVGTYKGKIYSAGYWDAALAIFARKSVLDKNDIRIPTVDRPWTKDEFDSA HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH LATLQQAGYDTPLDIGAEDTGEWWSYAYSPMLQSFGGDEINRDTYRTAEGALNGPAAVNF HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHH FTWFQDAFKKGWASNSGTIGNQEFVDDKVALSYTGVWNALDSLEKIGDDLLILPPPDFGQ HHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEHHHHHHHHHHHHCCCCEEEECCCCCCC GPKIGGGSWQWGITAGCEQADGARQYLRFSFQDKYIAQFADSQIVIPATAGAEELSKYFT CCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCEEEECCCCHHHHHHHHH ADGALRPFVVLSQKFALARPATPAYSVISSIFEKATKDIMNGADVKSTLGSAVEDIDENI CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC TANDNYGS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA