Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yesP [H]

Identifier: 158318767

GI number: 158318767

Start: 8588555

End: 8589484

Strand: Reverse

Name: yesP [H]

Synonym: Franean1_7038

Alternate gene names: 158318767

Gene position: 8589484-8588555 (Counterclockwise)

Preceding gene: 158318768

Following gene: 158318766

Centisome position: 95.63

GC content: 63.01

Gene sequence:

>930_bases
ATGACGTCCTCCACCCATGACGTGCCCCCGATCCGGCGGGGACGCCCTTCGGTGACCGCTCGACGGGAACGGCGCGCCGC
CGTCGTGATGGCCGCGCCTGCGGTCATCCTGCTCGTGCTGTTCCTGATCGTTCCGGTGCTGCTCGGGTTAGTCCTGTCAT
TCACCAATGCGCGTCTCATCTCGCCGAACCCGCCCCGGTTCGTCGGGCTCCACAACTTCATCCGAGCCTTTACCGCCGAC
GACACCTTCCTGCGGTCCGCCTGGAACACCTTCGTGTTCGCGCTCGTCGTCGTCCCGGTACAGGCTGGTCTCGGCCTCCT
GCTCGCCGTGCTCGTGAATCAGAAGCTCCGGGGAGCGACGCTCTTCCGCATCATCTTCTTCATTCCGGTCGTGACCTCGA
TCGTCGTCGTGTCGATCCTCTGGAAGTTCCTGTACCAGCAGAACGGGCTCATCAACTCGTTCATCGACATGGCTACCTTC
GGGGCATGGAACGGGACGGCGTGGCTCAACAACCCGAGCACCGCGCTCGGCGCGATCATCGTGCTCTCGGTCTGGCAGGG
TGTCGGCTTCCACATGGTGATCTGGCTGTCCGGTCTCCAGGCTATCCCCGAGGAGCTGTACGAGGCGGCACGGATGGACG
GTGCCGGAACATGGCAGCAGTTCAAGAACGTAACCTGGCCGGGCCTGCGCCCCATCATGGCATTTGTTCTCGTCACCATC
ACGATCGCAGCGCTCGGCCTCTTCGTGCAGATCGACGTGATAACTCAGGGAGGACCCGTCGATGCCACCTCGACGGTCGT
CTACCACGCGGTCCGCAAAGGCTATCAGGAGCAGGAAATCGGCTACGGATCCACCATCTCCCTTCTCTTCTTCGTCGCCG
TGCTTGTCATCGCGCTCGTCCAGCGGCGCCTCACCAGAGAGAAGGACTGA

Upstream 100 bases:

>100_bases
GAGAACATCACGGCCAACGACAACTACGGCTCCTGATCATCTCGTTCCATCCAGGTGGGGGCCGTGCACACGGCCCCCAC
CCCTCACCCAGAGGTCGACG

Downstream 100 bases:

>100_bases
ACATGACCACCATCGCACGGCCCCATACGCCGGGGAAAACCCGGGTGATCGGGGTGCGCACGCTGAAACGGCGTCGCATG
ATCTGGTCCTATCTGGCGAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTSSTHDVPPIRRGRPSVTARRERRAAVVMAAPAVILLVLFLIVPVLLGLVLSFTNARLISPNPPRFVGLHNFIRAFTAD
DTFLRSAWNTFVFALVVVPVQAGLGLLLAVLVNQKLRGATLFRIIFFIPVVTSIVVVSILWKFLYQQNGLINSFIDMATF
GAWNGTAWLNNPSTALGAIIVLSVWQGVGFHMVIWLSGLQAIPEELYEAARMDGAGTWQQFKNVTWPGLRPIMAFVLVTI
TIAALGLFVQIDVITQGGPVDATSTVVYHAVRKGYQEQEIGYGSTISLLFFVAVLVIALVQRRLTREKD

Sequences:

>Translated_309_residues
MTSSTHDVPPIRRGRPSVTARRERRAAVVMAAPAVILLVLFLIVPVLLGLVLSFTNARLISPNPPRFVGLHNFIRAFTAD
DTFLRSAWNTFVFALVVVPVQAGLGLLLAVLVNQKLRGATLFRIIFFIPVVTSIVVVSILWKFLYQQNGLINSFIDMATF
GAWNGTAWLNNPSTALGAIIVLSVWQGVGFHMVIWLSGLQAIPEELYEAARMDGAGTWQQFKNVTWPGLRPIMAFVLVTI
TIAALGLFVQIDVITQGGPVDATSTVVYHAVRKGYQEQEIGYGSTISLLFFVAVLVIALVQRRLTREKD
>Mature_308_residues
TSSTHDVPPIRRGRPSVTARRERRAAVVMAAPAVILLVLFLIVPVLLGLVLSFTNARLISPNPPRFVGLHNFIRAFTADD
TFLRSAWNTFVFALVVVPVQAGLGLLLAVLVNQKLRGATLFRIIFFIPVVTSIVVVSILWKFLYQQNGLINSFIDMATFG
AWNGTAWLNNPSTALGAIIVLSVWQGVGFHMVIWLSGLQAIPEELYEAARMDGAGTWQQFKNVTWPGLRPIMAFVLVTIT
IAALGLFVQIDVITQGGPVDATSTVVYHAVRKGYQEQEIGYGSTISLLFFVAVLVIALVQRRLTREKD

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=31.9727891156463, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1790465, Length=266, Percent_Identity=31.203007518797, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787570, Length=247, Percent_Identity=27.1255060728745, Blast_Score=104, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34000; Mature: 33868

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSTHDVPPIRRGRPSVTARRERRAAVVMAAPAVILLVLFLIVPVLLGLVLSFTNARLI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
SPNPPRFVGLHNFIRAFTADDTFLRSAWNTFVFALVVVPVQAGLGLLLAVLVNQKLRGAT
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LFRIIFFIPVVTSIVVVSILWKFLYQQNGLINSFIDMATFGAWNGTAWLNNPSTALGAII
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCHHHHHHHH
VLSVWQGVGFHMVIWLSGLQAIPEELYEAARMDGAGTWQQFKNVTWPGLRPIMAFVLVTI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHH
TIAALGLFVQIDVITQGGPVDATSTVVYHAVRKGYQEQEIGYGSTISLLFFVAVLVIALV
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHH
QRRLTREKD
HHHHHCCCC
>Mature Secondary Structure 
TSSTHDVPPIRRGRPSVTARRERRAAVVMAAPAVILLVLFLIVPVLLGLVLSFTNARLI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
SPNPPRFVGLHNFIRAFTADDTFLRSAWNTFVFALVVVPVQAGLGLLLAVLVNQKLRGAT
CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LFRIIFFIPVVTSIVVVSILWKFLYQQNGLINSFIDMATFGAWNGTAWLNNPSTALGAII
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCHHHHHHHH
VLSVWQGVGFHMVIWLSGLQAIPEELYEAARMDGAGTWQQFKNVTWPGLRPIMAFVLVTI
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHH
TIAALGLFVQIDVITQGGPVDATSTVVYHAVRKGYQEQEIGYGSTISLLFFVAVLVIALV
HHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHH
QRRLTREKD
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]