| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is yhfK [C]
Identifier: 158318762
GI number: 158318762
Start: 8580940
End: 8583564
Strand: Reverse
Name: yhfK [C]
Synonym: Franean1_7033
Alternate gene names: 158318762
Gene position: 8583564-8580940 (Counterclockwise)
Preceding gene: 158318763
Following gene: 158318761
Centisome position: 95.56
GC content: 71.89
Gene sequence:
>2625_bases ATGCGGAACGGATGGCTGGGACGGCTCGTTCGGGCGTTCTCCGACGATCCCGGGCTGATCAACCTCAAGGCGGCCGTCCG GGTCGCCGCCGTCGCCCCCATGTTGCTGGCGGTCACCTATCTGGTCGGTGGGGACATGCGGCTGAGTCTGTTCGCCTGGT TCGGCTCCTACGTCCTGTTGGAGTTCGTCGAGTTCACCGGGCCGGTCAGTACCAGGCTGGTGGCCTATGTCGCGTTCGCG TTCGGCGCCGTCCCGCTTCTCGTCGTCGGGACGCTGTGTTCCCGGACGGCCTGGCTGGCGGTACCGGCAACTGCATTGGT TGCCTGGGTCGTGCTGTTCTCCGGGGTCCTCAACGCGTATTTCGCCATCGCCGGACGGGCCACGCTGATGGCCTTTGTCC TGGCAGTCATGACTCCCGGCCCTGTGTCGGCCATTCCGGAACGGCTTGCCGGCTGGGGGGTCGCCATGGTGACGGCCGTC ACCGCGGCCATGATGCTGTGGCCGGAGCGGCCACCGACTCGGCTGCGTGCCGCGCTGGCCCAGGCGTGCCGGTCGATGGC CGCCGGGGTGGCGTGGACGACGATGCCTTCTGAGGGGTCCGGCGGGACCGGGGCGGAGGAAGTCCACCGGATCTGGACCG ATGTGTTCCATCTGCGCCGCAGGTTCGTCGAGACCGCGCACCGGCCCGGCGGTGTCGGCGGGCGCACCGCGGCGTCGGGG CATCTGGTCGTGGATGTCAACTGGTTGGTCCCGTTCGCTTTACCGCGCGCGGACCGGGACGGGATCGCTGCGGTCTGCTT CCGCCGGGAGGCGGCCGAGCTCCACGCCGCCGCCGCTGCCACGCTCACCGCCGCGGCCGATCGACTCGACCGCGATCCAC AGACGAGCGAGCGGCTCGGTCTGGACCGCCTGGAGCGGGCTGAGCGGGGGATGCGCACAGCCCTGCTGGACTACGTGGAG TGCTCAGACAACCGGCCGGCGCCTGACGTTACTGTGCCGATCGCCCGATCGGCCAATTCTGGTGTCGCGGGGTCGGAGCA GCCACCGGCGGACCTCGCCATCGCCGAGGCGTTCCGGCTGCGCAGGCTGGCCCGGGGTACTCGGGAGCTGGCGGTGAACG TGCTGTGGGTGACCGCGCCGGCGCCGACGCTGCGTTCCTGGATACGGCCGCGTGGCTGGTCGGCCAGGCTGAGGCGGCTC GCCCGCCGCGGCGTCGCCGCCACCGATCTGGCCGCCGGATACGTCAGCTTGCGGTCGGTGTGGTTCCGCAACAGTGTGCG CGGCGCCGTGGGGCTCGCCCTCGCTGTCGCTGTGGCCCAGAACATCGAGGTGCAGCATGGCCTCTGGGTCGTGCTCGGCA CGCTGTCGGTCCTGCGGTCGAACGTGGCGGCGACCAGCTCGACGATCCTGCGGGGACTGCTGGGCACCGGGGTCGGTATC GTGGTGGGTGGCCTGTTCGTCGCCCTGGTCGGCGCCCATACCGTGGTGTTGTGGCTGGTGCTGCCGCTGGCCATGTTCGT CGCCGGCTATCTGCGGCGCAGACCGTCCTTCGCGCTGGGGCAGGCAGGCTTCACCGTCGCCATCCTCATCCTTTTCGACA TCATGGAGCCGTCGGGCTGGCAAGTGGGTCTGGTTCGCATCCAGGACGTGATGATCGGTTTCGGGGTGAGCCTGGCTGTG GGAGCGCTGCTGTGGCCCCGGGGAGCGGCGGCGGTGATCCGGCGCCGGGCCGCCGCCGCTTACCGGACGGGCGCGGACCT CCTCGCGCTGGTCGTCATGCGGGCACCCGGTGACGACGACCCGCCCAGCGCCCGGCCGCGGACCTCGCCATGGCTGTACC CGGCCTACACCGGAACATCGGGCTATCCGGGCAGCACCGCCGCCGCACCGGTGAGCCGGGTCGACACCCCTCGCGCAGAG AACGCTGACACCACAGGCCCGGCCGACGGGGCCGTCCGCCGTCCCCGTCGGGACGAGGACGTCACCGGCGCGGCGCGCGA CGCCATCCGCGCCGGGCGGCTGCTCGACGACGTGGTCCGCCAGTACCTGTCGGAACAGTCCAACGACCGGGTCGACGTCG ACGCGCTCATGACCATCGTTGGCGGGGCACTGCGGCTGCGCCGGACCGCACAGCTGCTGCGGGCCGGCGACGTGCCCTGG CCAGCGGACATCCTGCGGACCGGGGGCGATGTCAGCGCGACCGCCTCGACCATGGAGATCTCCGCCGCGCTGCCCGATCT GGCCGCCGCTCAGGAGGCTGTCACAGTGGAGACGGCCGAGCTGTGCGACTGGTACCGGCGATTCGCCGAGGCACTCGATG ACGGCAGGCCACCACCAGCCGACGCGAACCCTGGTCCAGGCCCGGCCAGCACGGCGGCACTTGCCGTGGTGCGTCACGGC GCCGCGGCGCACCGACGCCCGGAACTGCGTGCCGGCGTGGCGCTGGCAGCACGCGCGACCTACCTCGACATCCTGCGGGA TCTGCGACCGATGCTCACCGACGCGGGTACGGCGCTCGCTCACCGGCCGGGCCGACCCTGGGCTAGCCGGCGGAGGACAG CCGAAGGGAGGGGAGCGGCCGCCAGACCCAGGCCCGCCCCGAACGTTCAGCGTGCCGGCGGGTGA
Upstream 100 bases:
>100_bases GTGGGTCGGCGCCGATGCTGAGGGTGTCTGTTTCTGGAGTGACCGGTGGGGTCGGTGCTGGTTGTAGTACGGCGACGATC CAGGGCAGGTAGGGCTGCTG
Downstream 100 bases:
>100_bases CAACACTGTCGACTTTCCAGCCCTGAGGCATCCGGTCCGCGACGGTAGCCGGGGTCCGACGTGGGTACGAGCCTGCAGAT GGCCGTCGCGGCATGAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 874; Mature: 874
Protein sequence:
>874_residues MRNGWLGRLVRAFSDDPGLINLKAAVRVAAVAPMLLAVTYLVGGDMRLSLFAWFGSYVLLEFVEFTGPVSTRLVAYVAFA FGAVPLLVVGTLCSRTAWLAVPATALVAWVVLFSGVLNAYFAIAGRATLMAFVLAVMTPGPVSAIPERLAGWGVAMVTAV TAAMMLWPERPPTRLRAALAQACRSMAAGVAWTTMPSEGSGGTGAEEVHRIWTDVFHLRRRFVETAHRPGGVGGRTAASG HLVVDVNWLVPFALPRADRDGIAAVCFRREAAELHAAAAATLTAAADRLDRDPQTSERLGLDRLERAERGMRTALLDYVE CSDNRPAPDVTVPIARSANSGVAGSEQPPADLAIAEAFRLRRLARGTRELAVNVLWVTAPAPTLRSWIRPRGWSARLRRL ARRGVAATDLAAGYVSLRSVWFRNSVRGAVGLALAVAVAQNIEVQHGLWVVLGTLSVLRSNVAATSSTILRGLLGTGVGI VVGGLFVALVGAHTVVLWLVLPLAMFVAGYLRRRPSFALGQAGFTVAILILFDIMEPSGWQVGLVRIQDVMIGFGVSLAV GALLWPRGAAAVIRRRAAAAYRTGADLLALVVMRAPGDDDPPSARPRTSPWLYPAYTGTSGYPGSTAAAPVSRVDTPRAE NADTTGPADGAVRRPRRDEDVTGAARDAIRAGRLLDDVVRQYLSEQSNDRVDVDALMTIVGGALRLRRTAQLLRAGDVPW PADILRTGGDVSATASTMEISAALPDLAAAQEAVTVETAELCDWYRRFAEALDDGRPPPADANPGPGPASTAALAVVRHG AAAHRRPELRAGVALAARATYLDILRDLRPMLTDAGTALAHRPGRPWASRRRTAEGRGAAARPRPAPNVQRAGG
Sequences:
>Translated_874_residues MRNGWLGRLVRAFSDDPGLINLKAAVRVAAVAPMLLAVTYLVGGDMRLSLFAWFGSYVLLEFVEFTGPVSTRLVAYVAFA FGAVPLLVVGTLCSRTAWLAVPATALVAWVVLFSGVLNAYFAIAGRATLMAFVLAVMTPGPVSAIPERLAGWGVAMVTAV TAAMMLWPERPPTRLRAALAQACRSMAAGVAWTTMPSEGSGGTGAEEVHRIWTDVFHLRRRFVETAHRPGGVGGRTAASG HLVVDVNWLVPFALPRADRDGIAAVCFRREAAELHAAAAATLTAAADRLDRDPQTSERLGLDRLERAERGMRTALLDYVE CSDNRPAPDVTVPIARSANSGVAGSEQPPADLAIAEAFRLRRLARGTRELAVNVLWVTAPAPTLRSWIRPRGWSARLRRL ARRGVAATDLAAGYVSLRSVWFRNSVRGAVGLALAVAVAQNIEVQHGLWVVLGTLSVLRSNVAATSSTILRGLLGTGVGI VVGGLFVALVGAHTVVLWLVLPLAMFVAGYLRRRPSFALGQAGFTVAILILFDIMEPSGWQVGLVRIQDVMIGFGVSLAV GALLWPRGAAAVIRRRAAAAYRTGADLLALVVMRAPGDDDPPSARPRTSPWLYPAYTGTSGYPGSTAAAPVSRVDTPRAE NADTTGPADGAVRRPRRDEDVTGAARDAIRAGRLLDDVVRQYLSEQSNDRVDVDALMTIVGGALRLRRTAQLLRAGDVPW PADILRTGGDVSATASTMEISAALPDLAAAQEAVTVETAELCDWYRRFAEALDDGRPPPADANPGPGPASTAALAVVRHG AAAHRRPELRAGVALAARATYLDILRDLRPMLTDAGTALAHRPGRPWASRRRTAEGRGAAARPRPAPNVQRAGG >Mature_874_residues MRNGWLGRLVRAFSDDPGLINLKAAVRVAAVAPMLLAVTYLVGGDMRLSLFAWFGSYVLLEFVEFTGPVSTRLVAYVAFA FGAVPLLVVGTLCSRTAWLAVPATALVAWVVLFSGVLNAYFAIAGRATLMAFVLAVMTPGPVSAIPERLAGWGVAMVTAV TAAMMLWPERPPTRLRAALAQACRSMAAGVAWTTMPSEGSGGTGAEEVHRIWTDVFHLRRRFVETAHRPGGVGGRTAASG HLVVDVNWLVPFALPRADRDGIAAVCFRREAAELHAAAAATLTAAADRLDRDPQTSERLGLDRLERAERGMRTALLDYVE CSDNRPAPDVTVPIARSANSGVAGSEQPPADLAIAEAFRLRRLARGTRELAVNVLWVTAPAPTLRSWIRPRGWSARLRRL ARRGVAATDLAAGYVSLRSVWFRNSVRGAVGLALAVAVAQNIEVQHGLWVVLGTLSVLRSNVAATSSTILRGLLGTGVGI VVGGLFVALVGAHTVVLWLVLPLAMFVAGYLRRRPSFALGQAGFTVAILILFDIMEPSGWQVGLVRIQDVMIGFGVSLAV GALLWPRGAAAVIRRRAAAAYRTGADLLALVVMRAPGDDDPPSARPRTSPWLYPAYTGTSGYPGSTAAAPVSRVDTPRAE NADTTGPADGAVRRPRRDEDVTGAARDAIRAGRLLDDVVRQYLSEQSNDRVDVDALMTIVGGALRLRRTAQLLRAGDVPW PADILRTGGDVSATASTMEISAALPDLAAAQEAVTVETAELCDWYRRFAEALDDGRPPPADANPGPGPASTAALAVVRHG AAAHRRPELRAGVALAARATYLDILRDLRPMLTDAGTALAHRPGRPWASRRRTAEGRGAAARPRPAPNVQRAGG
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92768; Mature: 92768
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNGWLGRLVRAFSDDPGLINLKAAVRVAAVAPMLLAVTYLVGGDMRLSLFAWFGSYVLL CCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EFVEFTGPVSTRLVAYVAFAFGAVPLLVVGTLCSRTAWLAVPATALVAWVVLFSGVLNAY HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FAIAGRATLMAFVLAVMTPGPVSAIPERLAGWGVAMVTAVTAAMMLWPERPPTRLRAALA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QACRSMAAGVAWTTMPSEGSGGTGAEEVHRIWTDVFHLRRRFVETAHRPGGVGGRTAASG HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC HLVVDVNWLVPFALPRADRDGIAAVCFRREAAELHAAAAATLTAAADRLDRDPQTSERLG EEEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC LDRLERAERGMRTALLDYVECSDNRPAPDVTVPIARSANSGVAGSEQPPADLAIAEAFRL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH RRLARGTRELAVNVLWVTAPAPTLRSWIRPRGWSARLRRLARRGVAATDLAAGYVSLRSV HHHHCCHHHHEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH WFRNSVRGAVGLALAVAVAQNIEVQHGLWVVLGTLSVLRSNVAATSSTILRGLLGTGVGI HHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VVGGLFVALVGAHTVVLWLVLPLAMFVAGYLRRRPSFALGQAGFTVAILILFDIMEPSGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCCCC QVGLVRIQDVMIGFGVSLAVGALLWPRGAAAVIRRRAAAAYRTGADLLALVVMRAPGDDD EEEHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC PPSARPRTSPWLYPAYTGTSGYPGSTAAAPVSRVDTPRAENADTTGPADGAVRRPRRDED CCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC VTGAARDAIRAGRLLDDVVRQYLSEQSNDRVDVDALMTIVGGALRLRRTAQLLRAGDVPW CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PADILRTGGDVSATASTMEISAALPDLAAAQEAVTVETAELCDWYRRFAEALDDGRPPPA CHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DANPGPGPASTAALAVVRHGAAAHRRPELRAGVALAARATYLDILRDLRPMLTDAGTALA CCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH HRPGRPWASRRRTAEGRGAAARPRPAPNVQRAGG CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRNGWLGRLVRAFSDDPGLINLKAAVRVAAVAPMLLAVTYLVGGDMRLSLFAWFGSYVLL CCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH EFVEFTGPVSTRLVAYVAFAFGAVPLLVVGTLCSRTAWLAVPATALVAWVVLFSGVLNAY HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH FAIAGRATLMAFVLAVMTPGPVSAIPERLAGWGVAMVTAVTAAMMLWPERPPTRLRAALA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QACRSMAAGVAWTTMPSEGSGGTGAEEVHRIWTDVFHLRRRFVETAHRPGGVGGRTAASG HHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC HLVVDVNWLVPFALPRADRDGIAAVCFRREAAELHAAAAATLTAAADRLDRDPQTSERLG EEEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC LDRLERAERGMRTALLDYVECSDNRPAPDVTVPIARSANSGVAGSEQPPADLAIAEAFRL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHH RRLARGTRELAVNVLWVTAPAPTLRSWIRPRGWSARLRRLARRGVAATDLAAGYVSLRSV HHHHCCHHHHEEEEEEEECCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH WFRNSVRGAVGLALAVAVAQNIEVQHGLWVVLGTLSVLRSNVAATSSTILRGLLGTGVGI HHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VVGGLFVALVGAHTVVLWLVLPLAMFVAGYLRRRPSFALGQAGFTVAILILFDIMEPSGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHCCCCCC QVGLVRIQDVMIGFGVSLAVGALLWPRGAAAVIRRRAAAAYRTGADLLALVVMRAPGDDD EEEHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC PPSARPRTSPWLYPAYTGTSGYPGSTAAAPVSRVDTPRAENADTTGPADGAVRRPRRDED CCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC VTGAARDAIRAGRLLDDVVRQYLSEQSNDRVDVDALMTIVGGALRLRRTAQLLRAGDVPW CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PADILRTGGDVSATASTMEISAALPDLAAAQEAVTVETAELCDWYRRFAEALDDGRPPPA CHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DANPGPGPASTAALAVVRHGAAAHRRPELRAGVALAARATYLDILRDLRPMLTDAGTALA CCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH HRPGRPWASRRRTAEGRGAAARPRPAPNVQRAGG CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA