| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is levB [H]
Identifier: 158318763
GI number: 158318763
Start: 8583805
End: 8585850
Strand: Reverse
Name: levB [H]
Synonym: Franean1_7034
Alternate gene names: 158318763
Gene position: 8585850-8583805 (Counterclockwise)
Preceding gene: 158318764
Following gene: 158318762
Centisome position: 95.59
GC content: 62.66
Gene sequence:
>2046_bases ATGAATTTACGCATCAGACGAAGCGCGGGAAACAAGCATTCCGTGGTCAGGCGCCCCGTTACTCTGACGGCGGTTCTGAC GGCGGCCACGGCGGCAGCCAGCATATTATTAGGCCTGCCGGCGCCCACTCCGGCGTCGGCAGTCGGTCCGAGTTACCGGG ACACCTACCACTTCACCGTGCCCGACCACTGGAAGAACGACCCGCAACGTCCGGTGTACGTGAACGGCAAGTTCTATTAC TACTACCTCTACAACGCCGATTACGACGCCAACCCGACGGCCAACTACGGCACCGAGTGGCGGCTCGCGACCAGCTACGA CGGCGTCGTGTTCGCCGATCAGGGGGTTGCGGCACCGAAGAAGACGAACGCCAACTATGATCTGTGGTCGGGCTCAACGG TGGTCGACACCGCCAATACAGCCGGGTTCGGCGCAGGCGCCGTCGTGATGCTCGTGACCCAGATGGACCATCCGACCGAG GCGCAGAAGCTCAACGCATCCGGTCCGCAGGCCCAGTTCCTCTGGTATTCAACGAACGGCGGCCGCAACTTCACACCGTA CGGCGAGGCGCCGGTCATCGCGAACGGCGGTCGGGCTGACTTCCGGGATCCGAAGGTCCTGTGGGATGCTGACCGCAACC GCTGGGTCGCGCTCATCGCCGAAGGCCAGAAGATCGGTTTCTACACCTCGGCCAACCTCAAGGACTGGACCCGGGTCTCC GAGTACACCAACAGCGGCCTCGGTATTCTGGAGTGCCCCGACCTGTTCAAGATGCGTGCCGATGACGGCACCACCCACTG GGTAATGGGCATGAGCGCAAACGGTTACCTCACCGGCGCACCCAGCACGTACGCCTACTGGACAGGAAGTTTCGACGGCA CGACATTCACACCCGACACGGCGGAGCCGCAGTGGGCCGACCACGGATTCGACTGGTACGGTGCGGTCACCTGGGAGGAC CCGACGGCACCACTCGACAAGCGCTACGCGATCGGATGGATGAACAACTGGTCGTACCCGCACTCGACGCCGACGTGGCC GAACGACGGCTTCAATGGAACCGACTCGATCACCCGCCAACTGGCACTGAAGAAATACGGATCGACATACAGCCTAACAT CCCAGCCAGTTGCTGCACTGAACAATATTGCGACACAGACAACGAACCTCGGTACGTTCTCGGTGAACGGCACCGTGCCG CTCGCCTACAGTGGTACCTCGTACCAGCTCGAGACGACGGTGACCTGGAGCACTGCACAGAACATCGGTCTTGGGCTGCG CAGGTCGAACGACGGTACCCGCCACGCCGACGTGGGCGTGCACGACACGTACAGTTATCTTAACCGAGGTGGTACCACAA ATCCGGACACTTCTGGACAGAAGCTTGAAAGTCGCGCTCCGTTCGACATGAGCGCCCAAACCGTGCACCTGCGTATCCTC GTCGACCGCACCACGATCGAAGTGTTTGTCGACGACGGGCGCTTCGTGCACTCGAGCCAGGTCTTCCCCGACCCCGCCGA TGCCGGCATCGCCCTGTACTCGCTCGGTGGGACAGCGACCTTCTCCAACGTCACGATCACCGAATTCGGTAGCGTCGTCC AGAGGCCAGCACGACTGATCGCGGACTTCGAGGGCTCGACCTGGGGCAACGGATGGACCGCGACGGGCTCCTTCGCCTCC GCCGCGCCGACCGTGGCATCGCTGCCCGGACAGGTTGGCGCCAAGGTCGCCGACACCTACGTCGGCGGCGGTGACCCGGC GACCGGCACGATCACCTCCCCGCCGTTCACCATCGATCGCAACCATCTCCACTTCTCCATAGCGGGCGGCAACCATCCCC TTGGCGCGGAACCGGCCACGTCCGTCCAACTGCTCGTCGGCGGACAACCTGTCCTCACGTCAACCGGGGATAATTCGAGT ACCCTGCGACATGTCGAATGGGATGTTACTGCCTATGCCGGACAGGCCGCACAATTCCAGATCCTTGACGACGCGACTGG AACTTGGGGACACCTCGTGGTCGACCAGGTCGTACTGAGCGACTGA
Upstream 100 bases:
>100_bases TCGAATGGCACGACGACGAGTTGGTCGTCGCCACGCCGTTGGCGGACAAGAAAAGCAAGAGCTTTTTGGCGCCAGGTCGA TCACATTTAAGGAGTTAAAG
Downstream 100 bases:
>100_bases GCGGCTGAGTCAGCTCGGTGGACCCGGGCCGATGCGTTGTGGTTGCCGGAAACCGGGTTCGGGTCATGCGGCCTGCCGGT ATTCGTGGATGAGCCCGCCG
Product: levanase
Products: NA
Alternate protein names: 2,6-beta-fructan 6-levanbiohydrolase; Endo-levanase [H]
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MNLRIRRSAGNKHSVVRRPVTLTAVLTAATAAASILLGLPAPTPASAVGPSYRDTYHFTVPDHWKNDPQRPVYVNGKFYY YYLYNADYDANPTANYGTEWRLATSYDGVVFADQGVAAPKKTNANYDLWSGSTVVDTANTAGFGAGAVVMLVTQMDHPTE AQKLNASGPQAQFLWYSTNGGRNFTPYGEAPVIANGGRADFRDPKVLWDADRNRWVALIAEGQKIGFYTSANLKDWTRVS EYTNSGLGILECPDLFKMRADDGTTHWVMGMSANGYLTGAPSTYAYWTGSFDGTTFTPDTAEPQWADHGFDWYGAVTWED PTAPLDKRYAIGWMNNWSYPHSTPTWPNDGFNGTDSITRQLALKKYGSTYSLTSQPVAALNNIATQTTNLGTFSVNGTVP LAYSGTSYQLETTVTWSTAQNIGLGLRRSNDGTRHADVGVHDTYSYLNRGGTTNPDTSGQKLESRAPFDMSAQTVHLRIL VDRTTIEVFVDDGRFVHSSQVFPDPADAGIALYSLGGTATFSNVTITEFGSVVQRPARLIADFEGSTWGNGWTATGSFAS AAPTVASLPGQVGAKVADTYVGGGDPATGTITSPPFTIDRNHLHFSIAGGNHPLGAEPATSVQLLVGGQPVLTSTGDNSS TLRHVEWDVTAYAGQAAQFQILDDATGTWGHLVVDQVVLSD
Sequences:
>Translated_681_residues MNLRIRRSAGNKHSVVRRPVTLTAVLTAATAAASILLGLPAPTPASAVGPSYRDTYHFTVPDHWKNDPQRPVYVNGKFYY YYLYNADYDANPTANYGTEWRLATSYDGVVFADQGVAAPKKTNANYDLWSGSTVVDTANTAGFGAGAVVMLVTQMDHPTE AQKLNASGPQAQFLWYSTNGGRNFTPYGEAPVIANGGRADFRDPKVLWDADRNRWVALIAEGQKIGFYTSANLKDWTRVS EYTNSGLGILECPDLFKMRADDGTTHWVMGMSANGYLTGAPSTYAYWTGSFDGTTFTPDTAEPQWADHGFDWYGAVTWED PTAPLDKRYAIGWMNNWSYPHSTPTWPNDGFNGTDSITRQLALKKYGSTYSLTSQPVAALNNIATQTTNLGTFSVNGTVP LAYSGTSYQLETTVTWSTAQNIGLGLRRSNDGTRHADVGVHDTYSYLNRGGTTNPDTSGQKLESRAPFDMSAQTVHLRIL VDRTTIEVFVDDGRFVHSSQVFPDPADAGIALYSLGGTATFSNVTITEFGSVVQRPARLIADFEGSTWGNGWTATGSFAS AAPTVASLPGQVGAKVADTYVGGGDPATGTITSPPFTIDRNHLHFSIAGGNHPLGAEPATSVQLLVGGQPVLTSTGDNSS TLRHVEWDVTAYAGQAAQFQILDDATGTWGHLVVDQVVLSD >Mature_681_residues MNLRIRRSAGNKHSVVRRPVTLTAVLTAATAAASILLGLPAPTPASAVGPSYRDTYHFTVPDHWKNDPQRPVYVNGKFYY YYLYNADYDANPTANYGTEWRLATSYDGVVFADQGVAAPKKTNANYDLWSGSTVVDTANTAGFGAGAVVMLVTQMDHPTE AQKLNASGPQAQFLWYSTNGGRNFTPYGEAPVIANGGRADFRDPKVLWDADRNRWVALIAEGQKIGFYTSANLKDWTRVS EYTNSGLGILECPDLFKMRADDGTTHWVMGMSANGYLTGAPSTYAYWTGSFDGTTFTPDTAEPQWADHGFDWYGAVTWED PTAPLDKRYAIGWMNNWSYPHSTPTWPNDGFNGTDSITRQLALKKYGSTYSLTSQPVAALNNIATQTTNLGTFSVNGTVP LAYSGTSYQLETTVTWSTAQNIGLGLRRSNDGTRHADVGVHDTYSYLNRGGTTNPDTSGQKLESRAPFDMSAQTVHLRIL VDRTTIEVFVDDGRFVHSSQVFPDPADAGIALYSLGGTATFSNVTITEFGSVVQRPARLIADFEGSTWGNGWTATGSFAS AAPTVASLPGQVGAKVADTYVGGGDPATGTITSPPFTIDRNHLHFSIAGGNHPLGAEPATSVQLLVGGQPVLTSTGDNSS TLRHVEWDVTAYAGQAAQFQILDDATGTWGHLVVDQVVLSD
Specific function: Catalyzes the degradation of levan mainly into levanbiose (difructose). Is not active on sucrose [H]
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=510, Percent_Identity=29.0196078431373, Blast_Score=137, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR001362 - InterPro: IPR013189 - InterPro: IPR013148 [H]
Pfam domain/function: PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.64 [H]
Molecular weight: Translated: 73395; Mature: 73395
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRIRRSAGNKHSVVRRPVTLTAVLTAATAAASILLGLPAPTPASAVGPSYRDTYHFTV CCEEEECCCCCCCCEEECCEEEEHHHHHHHHHEEEEEECCCCCCHHHCCCCCCCEEEEEC PDHWKNDPQRPVYVNGKFYYYYLYNADYDANPTANYGTEWRLATSYDGVVFADQGVAAPK CHHCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCC KTNANYDLWSGSTVVDTANTAGFGAGAVVMLVTQMDHPTEAQKLNASGPQAQFLWYSTNG CCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCEEEEEEECCC GRNFTPYGEAPVIANGGRADFRDPKVLWDADRNRWVALIAEGQKIGFYTSANLKDWTRVS CCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCHHHHHH EYTNSGLGILECPDLFKMRADDGTTHWVMGMSANGYLTGAPSTYAYWTGSFDGTTFTPDT HHHCCCCEEEECCHHHEEECCCCCEEEEEEECCCCEEECCCCEEEEEECCCCCCEECCCC AEPQWADHGFDWYGAVTWEDPTAPLDKRYAIGWMNNWSYPHSTPTWPNDGFNGTDSITRQ CCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH LALKKYGSTYSLTSQPVAALNNIATQTTNLGTFSVNGTVPLAYSGTSYQLETTVTWSTAQ HHHHHCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCEEEEECCCCEEEEEEEEEECCC NIGLGLRRSNDGTRHADVGVHDTYSYLNRGGTTNPDTSGQKLESRAPFDMSAQTVHLRIL CCCEEEEECCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEE VDRTTIEVFVDDGRFVHSSQVFPDPADAGIALYSLGGTATFSNVTITEFGSVVQRPARLI EEEEEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCCEEECCEEHHHHHHHHHHHHHHE ADFEGSTWGNGWTATGSFASAAPTVASLPGQVGAKVADTYVGGGDPATGTITSPPFTIDR EECCCCCCCCCEEECCCCCCCCCHHHHCCCHHCCEEEHEECCCCCCCCCCCCCCCEEEEC NHLHFSIAGGNHPLGAEPATSVQLLVGGQPVLTSTGDNSSTLRHVEWDVTAYAGQAAQFQ CEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEEEEEEEECCCCEEEE ILDDATGTWGHLVVDQVVLSD EEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNLRIRRSAGNKHSVVRRPVTLTAVLTAATAAASILLGLPAPTPASAVGPSYRDTYHFTV CCEEEECCCCCCCCEEECCEEEEHHHHHHHHHEEEEEECCCCCCHHHCCCCCCCEEEEEC PDHWKNDPQRPVYVNGKFYYYYLYNADYDANPTANYGTEWRLATSYDGVVFADQGVAAPK CHHCCCCCCCCEEECCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCC KTNANYDLWSGSTVVDTANTAGFGAGAVVMLVTQMDHPTEAQKLNASGPQAQFLWYSTNG CCCCCEEEECCCEEEECCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCCCEEEEEEECCC GRNFTPYGEAPVIANGGRADFRDPKVLWDADRNRWVALIAEGQKIGFYTSANLKDWTRVS CCCCCCCCCCCEEECCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEEECCCCHHHHHH EYTNSGLGILECPDLFKMRADDGTTHWVMGMSANGYLTGAPSTYAYWTGSFDGTTFTPDT HHHCCCCEEEECCHHHEEECCCCCEEEEEEECCCCEEECCCCEEEEEECCCCCCEECCCC AEPQWADHGFDWYGAVTWEDPTAPLDKRYAIGWMNNWSYPHSTPTWPNDGFNGTDSITRQ CCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH LALKKYGSTYSLTSQPVAALNNIATQTTNLGTFSVNGTVPLAYSGTSYQLETTVTWSTAQ HHHHHCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCCEEEEECCCCEEEEEEEEEECCC NIGLGLRRSNDGTRHADVGVHDTYSYLNRGGTTNPDTSGQKLESRAPFDMSAQTVHLRIL CCCEEEEECCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEE VDRTTIEVFVDDGRFVHSSQVFPDPADAGIALYSLGGTATFSNVTITEFGSVVQRPARLI EEEEEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCCEEECCEEHHHHHHHHHHHHHHE ADFEGSTWGNGWTATGSFASAAPTVASLPGQVGAKVADTYVGGGDPATGTITSPPFTIDR EECCCCCCCCCEEECCCCCCCCCHHHHCCCHHCCEEEHEECCCCCCCCCCCCCCCEEEEC NHLHFSIAGGNHPLGAEPATSVQLLVGGQPVLTSTGDNSSTLRHVEWDVTAYAGQAAQFQ CEEEEEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEEEEEEEECCCCEEEE ILDDATGTWGHLVVDQVVLSD EEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]