| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318757
Identifier: 158318757
GI number: 158318757
Start: 8572164
End: 8573423
Strand: Direct
Name: 158318757
Synonym: Franean1_7028
Alternate gene names: NA
Gene position: 8572164-8573423 (Clockwise)
Preceding gene: 158318756
Following gene: 158318758
Centisome position: 95.44
GC content: 62.22
Gene sequence:
>1260_bases ATGATGAAAACCTTAAAAAGAAGGCGGCCATTCTTTATGGTCTCCGCCGTACTTTGCGGCGCGCTAATTCTCGCTGGTTG TAGTCCAGTCGGCGAGCAACCGTCCGTATCAACAGCCAGCCAGGCGTGCAATACGCCCGGAATCACCGCAGGCGAGGTCC GCCTTGGGTTCTTGATGTCCGAGAGTGGCGCGGGAGCATCGATGGCCCAGCCGTTCAGGGCGGGCGTCGACGCCCGCCTG GGCGTGGCGAACGCGGCCGGAGGGGTCCACGGACGCAAGGTTACCTACGTGTGGCGAGACGACGAGTCGGCATCGGCTGT CAACCTTGCTTCGGCACGACAGCTCCTCGCCACGGACGACGTATTCGGAATGATCGAGGCCAGCGCGGAGGCGTTCGGTT CATCAGCACTTCTACACAGCTCCGGGATCCCAGTCGTGGGTATCGCGCTGGATCCCACCTGGGCCTCCAATGACAACATG TTCAGCTTTACGAACATGATGGCAAATAATTCTTCCATCAGCACCTGGGGTGATTTTGTTGCAGCCCAGGGCGGCCGTCG CGCATTGATATTCAAGCCCATCTTCTCCGCGGCTTCAGACATCCTTGCGATGAAAATGTCCGACAGTCTGCAGGCGGCTG GTGTAGCCGTTGTCGGCAATAACGAGATCAGCCCGATGACGCTCGTTCCCGCCGTCATCGGCGAGCAGATCAGAGCCACA GCAGCCGACACCCTGATATTTGCCACAGACGCTGAGAACTCCTATCGGATCGTGGCAGCGGCCCGGGCAGCCGGTGCGGC AATCAGGGTCGCTCTGGTTCCGCCGGACGGCTACGACCCCCGAGCGCTCCACGAATGGGGAAGCGCCATCGCGGGCACGT ACTCCTATCTTCCGATCACACCGTTTGAGGTGAGCACCCCCGTCTACCGCGGGTTCTTCAACGCCATGGCCGCCTACTCG GCCCAGTTGCAGCCGCCGAATCAAACCTACGCGGCGGAGGGCTGGATCGCCGCCGACATGTTCCTGCGCGGGCTGGCCAT GGCGGGGGGCTGCCCGACCCGCGCAGAGTTCATCAGCAGCCTGCGGTCCGTTCAGGCCTACGACGCCGAAGGACTACTGC CCGCGTCGTTGAACATCAGCACGAGCGTTGGCGAGATCATCCGCTGCCTTCACTTCGTGCAGGTCGCGCCCGACGGGACC CATTTCACGCAGGTAACCCCAACACCGTTGTGTGGCAGGCGGCTGGCCACAAACGACTGA
Upstream 100 bases:
>100_bases CTTTCCAGGCGCCGAACCCGCGCCGTTCAGCACGATGGAGCGGGGACGGCGGGAAAGAGCTGCGGTTCGCCCAGCCGTGT AAGATTTTCCGTGACGAGGT
Downstream 100 bases:
>100_bases GAGAGGCTCTGTTGTGAACGATCGCGTTATTCGGCTCTGGGGACGATCACGTGACGGCCTGGTCCCCCGAAGAATCATGC AGGGCGTTCTGCGATCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MMKTLKRRRPFFMVSAVLCGALILAGCSPVGEQPSVSTASQACNTPGITAGEVRLGFLMSESGAGASMAQPFRAGVDARL GVANAAGGVHGRKVTYVWRDDESASAVNLASARQLLATDDVFGMIEASAEAFGSSALLHSSGIPVVGIALDPTWASNDNM FSFTNMMANNSSISTWGDFVAAQGGRRALIFKPIFSAASDILAMKMSDSLQAAGVAVVGNNEISPMTLVPAVIGEQIRAT AADTLIFATDAENSYRIVAAARAAGAAIRVALVPPDGYDPRALHEWGSAIAGTYSYLPITPFEVSTPVYRGFFNAMAAYS AQLQPPNQTYAAEGWIAADMFLRGLAMAGGCPTRAEFISSLRSVQAYDAEGLLPASLNISTSVGEIIRCLHFVQVAPDGT HFTQVTPTPLCGRRLATND
Sequences:
>Translated_419_residues MMKTLKRRRPFFMVSAVLCGALILAGCSPVGEQPSVSTASQACNTPGITAGEVRLGFLMSESGAGASMAQPFRAGVDARL GVANAAGGVHGRKVTYVWRDDESASAVNLASARQLLATDDVFGMIEASAEAFGSSALLHSSGIPVVGIALDPTWASNDNM FSFTNMMANNSSISTWGDFVAAQGGRRALIFKPIFSAASDILAMKMSDSLQAAGVAVVGNNEISPMTLVPAVIGEQIRAT AADTLIFATDAENSYRIVAAARAAGAAIRVALVPPDGYDPRALHEWGSAIAGTYSYLPITPFEVSTPVYRGFFNAMAAYS AQLQPPNQTYAAEGWIAADMFLRGLAMAGGCPTRAEFISSLRSVQAYDAEGLLPASLNISTSVGEIIRCLHFVQVAPDGT HFTQVTPTPLCGRRLATND >Mature_419_residues MMKTLKRRRPFFMVSAVLCGALILAGCSPVGEQPSVSTASQACNTPGITAGEVRLGFLMSESGAGASMAQPFRAGVDARL GVANAAGGVHGRKVTYVWRDDESASAVNLASARQLLATDDVFGMIEASAEAFGSSALLHSSGIPVVGIALDPTWASNDNM FSFTNMMANNSSISTWGDFVAAQGGRRALIFKPIFSAASDILAMKMSDSLQAAGVAVVGNNEISPMTLVPAVIGEQIRAT AADTLIFATDAENSYRIVAAARAAGAAIRVALVPPDGYDPRALHEWGSAIAGTYSYLPITPFEVSTPVYRGFFNAMAAYS AQLQPPNQTYAAEGWIAADMFLRGLAMAGGCPTRAEFISSLRSVQAYDAEGLLPASLNISTSVGEIIRCLHFVQVAPDGT HFTQVTPTPLCGRRLATND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43846; Mature: 43846
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTLKRRRPFFMVSAVLCGALILAGCSPVGEQPSVSTASQACNTPGITAGEVRLGFLMS CCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEECCEEEEEEEE ESGAGASMAQPFRAGVDARLGVANAAGGVHGRKVTYVWRDDESASAVNLASARQLLATDD CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCCC VFGMIEASAEAFGSSALLHSSGIPVVGIALDPTWASNDNMFSFTNMMANNSSISTWGDFV HHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEHHHHCCCCCCCHHHHHH AAQGGRRALIFKPIFSAASDILAMKMSDSLQAAGVAVVGNNEISPMTLVPAVIGEQIRAT HCCCCCEEEEEHHHHHHHHHHEEEHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH AADTLIFATDAENSYRIVAAARAAGAAIRVALVPPDGYDPRALHEWGSAIAGTYSYLPIT HCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEECCCC PFEVSTPVYRGFFNAMAAYSAQLQPPNQTYAAEGWIAADMFLRGLAMAGGCPTRAEFISS CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH LRSVQAYDAEGLLPASLNISTSVGEIIRCLHFVQVAPDGTHFTQVTPTPLCGRRLATND HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MMKTLKRRRPFFMVSAVLCGALILAGCSPVGEQPSVSTASQACNTPGITAGEVRLGFLMS CCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCEECCEEEEEEEE ESGAGASMAQPFRAGVDARLGVANAAGGVHGRKVTYVWRDDESASAVNLASARQLLATDD CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHCCC VFGMIEASAEAFGSSALLHSSGIPVVGIALDPTWASNDNMFSFTNMMANNSSISTWGDFV HHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEHHHHCCCCCCCHHHHHH AAQGGRRALIFKPIFSAASDILAMKMSDSLQAAGVAVVGNNEISPMTLVPAVIGEQIRAT HCCCCCEEEEEHHHHHHHHHHEEEHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH AADTLIFATDAENSYRIVAAARAAGAAIRVALVPPDGYDPRALHEWGSAIAGTYSYLPIT HCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEECCCC PFEVSTPVYRGFFNAMAAYSAQLQPPNQTYAAEGWIAADMFLRGLAMAGGCPTRAEFISS CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH LRSVQAYDAEGLLPASLNISTSVGEIIRCLHFVQVAPDGTHFTQVTPTPLCGRRLATND HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA