| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is purR [H]
Identifier: 158318756
GI number: 158318756
Start: 8570625
End: 8571686
Strand: Direct
Name: purR [H]
Synonym: Franean1_7027
Alternate gene names: 158318756
Gene position: 8570625-8571686 (Clockwise)
Preceding gene: 158318747
Following gene: 158318757
Centisome position: 95.42
GC content: 66.76
Gene sequence:
>1062_bases ATGGTCAAGATGGCGGACGTGGCGAAGATCGCGGGCGTCTCCGTGTCCACGGTCTCGCACGTCCTCAACGACACGCGGGC GGTGCGGGCCGAGACCCGCGCGGCCGTGCTCGCAGCCATCGAACAGACCGGTTACACACAGAACACGATCGCGCGGGCGC TCGTCACGGCCAGCAGTGGCCTGATCGGCCTATCGATCCCGGTGATCACCAACCCCTACTTCACCGACGTGATCCACGCG ATCGAGACGAACGTGTCGGCCACCAGCTACACCCTGATACTCGCCGACTCGCGCGAGGACCCCGAGCATGAGCTCCGGGC CCTCCGGGCGCTCCTTCAACGTCGGATCGACGGGTTGATCATCGTACCGGCCGGCGGTGACAATCAGCTGGCCTTGGAGC ACCTCGCCGCGAGCTCCGTGCCGACGGTACTCATCGACCGGCTGGCGTCAGCCGACTTCGATCAGGTCGGACCAGACAAC GAGGAGCCGACCGCTCAGCTCGTCGAGCACCTCGCAGACCTGGGACACCACCGAATTGGCATGGTCGCCGGCCTGAGCGG TCTCACCACCACCCGCGAGCGACTGGCCGGCTACCGGCGGGGGCTAGACCGACACGGACTGCCTTATGACGAGAAACTAG TTGCCGGCGGCGGCTCCCAGATCGAGGGTGCCAGGGCAGCCGCCCACACCTTGCTAGCGCTGCCGAATCCGCCGACCGCG CTGGTCGTCGCCAACAACCTCATGACGATCGGGACCATGCACGCACTACGGGAGACAGGCCGGCGGGTGCCCGACGACAT CGCGCTTACCTGCTTCGACGACTTCGAATGGGCCGACCTCTTCTCGCCCCGGCTGACCACCATGGCCCAGCCACGCGTTG AGTTGGGCAACGTCGCGGTGGAGTTGCTGATGCGACGGCTCGCCGACCCCACGGTGCCTCCGCGTACGGTACGACTTGCC CCCCAGTTCATGCACCGCGACTCCTGTGGCTGCACTCCCGAACAACGAATGGCGACGGGCCAGGACAAGGAGGTCGGCAG CCCTTCCAGCCCGCCAGTATGA
Upstream 100 bases:
>100_bases CGGGGTTGCGCCGGAATGTAGCTCGGGTCACAGTAGGAGCGCAAGCGCTTGCGCGAACGTTTGCCCAACTTCTCGTCGGG ACGTCCGGTAGGGAGATCGC
Downstream 100 bases:
>100_bases CTCAGGAGGGATCACCTGATACACCGTTGACCCGTCCCTGATTCGCCTATGGATGGTCGTGGCGTGAGTACGCCGGCTTC CGGCGCTGCCCGCTCTTTGC
Product: LacI family transcription regulator
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MVKMADVAKIAGVSVSTVSHVLNDTRAVRAETRAAVLAAIEQTGYTQNTIARALVTASSGLIGLSIPVITNPYFTDVIHA IETNVSATSYTLILADSREDPEHELRALRALLQRRIDGLIIVPAGGDNQLALEHLAASSVPTVLIDRLASADFDQVGPDN EEPTAQLVEHLADLGHHRIGMVAGLSGLTTTRERLAGYRRGLDRHGLPYDEKLVAGGGSQIEGARAAAHTLLALPNPPTA LVVANNLMTIGTMHALRETGRRVPDDIALTCFDDFEWADLFSPRLTTMAQPRVELGNVAVELLMRRLADPTVPPRTVRLA PQFMHRDSCGCTPEQRMATGQDKEVGSPSSPPV
Sequences:
>Translated_353_residues MVKMADVAKIAGVSVSTVSHVLNDTRAVRAETRAAVLAAIEQTGYTQNTIARALVTASSGLIGLSIPVITNPYFTDVIHA IETNVSATSYTLILADSREDPEHELRALRALLQRRIDGLIIVPAGGDNQLALEHLAASSVPTVLIDRLASADFDQVGPDN EEPTAQLVEHLADLGHHRIGMVAGLSGLTTTRERLAGYRRGLDRHGLPYDEKLVAGGGSQIEGARAAAHTLLALPNPPTA LVVANNLMTIGTMHALRETGRRVPDDIALTCFDDFEWADLFSPRLTTMAQPRVELGNVAVELLMRRLADPTVPPRTVRLA PQFMHRDSCGCTPEQRMATGQDKEVGSPSSPPV >Mature_353_residues MVKMADVAKIAGVSVSTVSHVLNDTRAVRAETRAAVLAAIEQTGYTQNTIARALVTASSGLIGLSIPVITNPYFTDVIHA IETNVSATSYTLILADSREDPEHELRALRALLQRRIDGLIIVPAGGDNQLALEHLAASSVPTVLIDRLASADFDQVGPDN EEPTAQLVEHLADLGHHRIGMVAGLSGLTTTRERLAGYRRGLDRHGLPYDEKLVAGGGSQIEGARAAAHTLLALPNPPTA LVVANNLMTIGTMHALRETGRRVPDDIALTCFDDFEWADLFSPRLTTMAQPRVELGNVAVELLMRRLADPTVPPRTVRLA PQFMHRDSCGCTPEQRMATGQDKEVGSPSSPPV
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790194, Length=333, Percent_Identity=35.1351351351351, Blast_Score=188, Evalue=5e-49, Organism=Escherichia coli, GI1787948, Length=335, Percent_Identity=32.5373134328358, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI1790369, Length=317, Percent_Identity=30.5993690851735, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1789068, Length=335, Percent_Identity=31.9402985074627, Blast_Score=142, Evalue=4e-35, Organism=Escherichia coli, GI1786540, Length=307, Percent_Identity=32.5732899022801, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1788474, Length=331, Percent_Identity=29.3051359516616, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789202, Length=334, Percent_Identity=29.6407185628743, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1787580, Length=321, Percent_Identity=28.3489096573209, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1787906, Length=327, Percent_Identity=29.3577981651376, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI48994940, Length=322, Percent_Identity=28.5714285714286, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1786268, Length=317, Percent_Identity=25.2365930599369, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790715, Length=327, Percent_Identity=25.3822629969419, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790689, Length=316, Percent_Identity=25, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 37855; Mature: 37855
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKMADVAKIAGVSVSTVSHVLNDTRAVRAETRAAVLAAIEQTGYTQNTIARALVTASSG CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC LIGLSIPVITNPYFTDVIHAIETNVSATSYTLILADSREDPEHELRALRALLQRRIDGLI EEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEE IVPAGGDNQLALEHLAASSVPTVLIDRLASADFDQVGPDNEEPTAQLVEHLADLGHHRIG EEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCHHHH MVAGLSGLTTTRERLAGYRRGLDRHGLPYDEKLVAGGGSQIEGARAAAHTLLALPNPPTA HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHEEECCCCCEE LVVANNLMTIGTMHALRETGRRVPDDIALTCFDDFEWADLFSPRLTTMAQPRVELGNVAV EEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHCCCHHHHHCCCCHHHHHHHH ELLMRRLADPTVPPRTVRLAPQFMHRDSCGCTPEQRMATGQDKEVGSPSSPPV HHHHHHHCCCCCCCCEEECCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MVKMADVAKIAGVSVSTVSHVLNDTRAVRAETRAAVLAAIEQTGYTQNTIARALVTASSG CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC LIGLSIPVITNPYFTDVIHAIETNVSATSYTLILADSREDPEHELRALRALLQRRIDGLI EEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEE IVPAGGDNQLALEHLAASSVPTVLIDRLASADFDQVGPDNEEPTAQLVEHLADLGHHRIG EEECCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCHHHH MVAGLSGLTTTRERLAGYRRGLDRHGLPYDEKLVAGGGSQIEGARAAAHTLLALPNPPTA HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHEEECCCCCEE LVVANNLMTIGTMHALRETGRRVPDDIALTCFDDFEWADLFSPRLTTMAQPRVELGNVAV EEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHCCCHHHHHCCCCHHHHHHHH ELLMRRLADPTVPPRTVRLAPQFMHRDSCGCTPEQRMATGQDKEVGSPSSPPV HHHHHHHCCCCCCCCEEECCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA