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The map label for this gene is rbsC [H]

Identifier: 158318754

GI number: 158318754

Start: 8568149

End: 8569156

Strand: Reverse

Name: rbsC [H]

Synonym: Franean1_7025

Alternate gene names: 158318754

Gene position: 8569156-8568149 (Counterclockwise)

Preceding gene: 158318755

Following gene: 158318753

Centisome position: 95.4

GC content: 60.52

Gene sequence:

>1008_bases
ATGGCATCAACGAAGGCTGCCGGGGCTGAGATAAAGCTCCGTGGCAGCGTCGGCTCATTCGCCAAACATGCACCGGACCT
GACCACCCTCGGCCCGGTGATCGCCCTGGTGCTGGCCGGATTATTCTTCAGTATCAAGTCCGACCGGTTCCTGACCGGCG
GGAACTTTTCCCTTATTCTCCAGCAGGTCATGGTGGTCGGCACCCTCGCGATCGGCCAAACCCTGATCATCCTGACCGCC
GGCATCGACCTGTCCAACGGCGCCATCATGGCTCTGGGTAACGTCCTCATAACGACGCTCGCGGTCGATGCTGGGCTCAA
CCCATTCCTGGCGATCGGTCTCGGTCTACTGGCCTGTACCGCCTTTGGGCTCCTCAACGGCGGTTTGGTTACCACGATTC
GGCTGCCACCATTTATCGTCACACTCGGTACGTTAAATATCGCTTTCGCGTTGACTCATATCTACTCCAATGAGGAGACT
ATTTCCGACCTACCCGCAACGCTCACCTATCTTGGGAAGACGTTCACCGTCGGCCAGACAGAAATCACCTATGGTTCCTT
GCTAATGCTCGCCCTGTTCGGAATCACTTGGTGCATTCTGACCCAGACTTCCGCCGGTCGGCACATCTACGCCGTCGGTG
ACAACCCTGAGGCTGCCCGCCTAACGGGCATCCGGACCCGGCGGGTCGTTCTCACCGTCTACGCTGTCGCCGGCCTTATC
TACGGCATCGCATCCCTGCTGCTCGTGTCCCGTACCGGCGTCGGCGATCCCAACGCAGGGCAGACCGACAACCTGGACAG
CATCACGGCTGTCGTGCTCGGCGGAACCAGCCTGTTTGGCGGCCGCGGCAGCGTGGTCGGCACGCTCCTGGGCGCGCTCA
TCGTCGGCGTTGTCCGCAACGGCCTGCAGCTCATCGGCACCAAATCCATCTACCAGGTGCTCATCACTGGCATTCTGGTC
ATCCTCGCCGTGGCCATTGACCAACTCGCTCGCAGGAGGAAAGCATGA

Upstream 100 bases:

>100_bases
CACGCTAACTGGACGGTTCGGCCGGGCGGTGGGACGTCTCACCCGCCGTCCGGCCGGACTCAGAGTAGCTGTAGTCCCGT
CTGGAGAACGAGGATCCGTC

Downstream 100 bases:

>100_bases
GAGGCACTATGGATTACCTTGCGCCGCAAACCGTCGAGAGCGGGCGGAAAGACATTGTACTCGAAGCCCGTGGCCTGGTG
AAGCGATACGGACAGGTCAC

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MASTKAAGAEIKLRGSVGSFAKHAPDLTTLGPVIALVLAGLFFSIKSDRFLTGGNFSLILQQVMVVGTLAIGQTLIILTA
GIDLSNGAIMALGNVLITTLAVDAGLNPFLAIGLGLLACTAFGLLNGGLVTTIRLPPFIVTLGTLNIAFALTHIYSNEET
ISDLPATLTYLGKTFTVGQTEITYGSLLMLALFGITWCILTQTSAGRHIYAVGDNPEAARLTGIRTRRVVLTVYAVAGLI
YGIASLLLVSRTGVGDPNAGQTDNLDSITAVVLGGTSLFGGRGSVVGTLLGALIVGVVRNGLQLIGTKSIYQVLITGILV
ILAVAIDQLARRRKA

Sequences:

>Translated_335_residues
MASTKAAGAEIKLRGSVGSFAKHAPDLTTLGPVIALVLAGLFFSIKSDRFLTGGNFSLILQQVMVVGTLAIGQTLIILTA
GIDLSNGAIMALGNVLITTLAVDAGLNPFLAIGLGLLACTAFGLLNGGLVTTIRLPPFIVTLGTLNIAFALTHIYSNEET
ISDLPATLTYLGKTFTVGQTEITYGSLLMLALFGITWCILTQTSAGRHIYAVGDNPEAARLTGIRTRRVVLTVYAVAGLI
YGIASLLLVSRTGVGDPNAGQTDNLDSITAVVLGGTSLFGGRGSVVGTLLGALIVGVVRNGLQLIGTKSIYQVLITGILV
ILAVAIDQLARRRKA
>Mature_334_residues
ASTKAAGAEIKLRGSVGSFAKHAPDLTTLGPVIALVLAGLFFSIKSDRFLTGGNFSLILQQVMVVGTLAIGQTLIILTAG
IDLSNGAIMALGNVLITTLAVDAGLNPFLAIGLGLLACTAFGLLNGGLVTTIRLPPFIVTLGTLNIAFALTHIYSNEETI
SDLPATLTYLGKTFTVGQTEITYGSLLMLALFGITWCILTQTSAGRHIYAVGDNPEAARLTGIRTRRVVLTVYAVAGLIY
GIASLLLVSRTGVGDPNAGQTDNLDSITAVVLGGTSLFGGRGSVVGTLLGALIVGVVRNGLQLIGTKSIYQVLITGILVI
LAVAIDQLARRRKA

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=298, Percent_Identity=37.248322147651, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1790524, Length=301, Percent_Identity=33.8870431893688, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1788896, Length=316, Percent_Identity=31.6455696202532, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1789992, Length=134, Percent_Identity=46.2686567164179, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI87082395, Length=272, Percent_Identity=33.0882352941176, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1788471, Length=281, Percent_Identity=32.3843416370107, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1787794, Length=278, Percent_Identity=31.294964028777, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI145693152, Length=270, Percent_Identity=30.7407407407407, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI145693214, Length=252, Percent_Identity=34.1269841269841, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787793, Length=304, Percent_Identity=30.2631578947368, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34618; Mature: 34487

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTKAAGAEIKLRGSVGSFAKHAPDLTTLGPVIALVLAGLFFSIKSDRFLTGGNFSLIL
CCCCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHH
QQVMVVGTLAIGQTLIILTAGIDLSNGAIMALGNVLITTLAVDAGLNPFLAIGLGLLACT
HHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AFGLLNGGLVTTIRLPPFIVTLGTLNIAFALTHIYSNEETISDLPATLTYLGKTFTVGQT
HHHHHCCCEEEEEECCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCC
EITYGSLLMLALFGITWCILTQTSAGRHIYAVGDNPEAARLTGIRTRRVVLTVYAVAGLI
HHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHH
YGIASLLLVSRTGVGDPNAGQTDNLDSITAVVLGGTSLFGGRGSVVGTLLGALIVGVVRN
HHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEECCCEECCCCCHHHHHHHHHHHHHHHHC
GLQLIGTKSIYQVLITGILVILAVAIDQLARRRKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASTKAAGAEIKLRGSVGSFAKHAPDLTTLGPVIALVLAGLFFSIKSDRFLTGGNFSLIL
CCCCCCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHH
QQVMVVGTLAIGQTLIILTAGIDLSNGAIMALGNVLITTLAVDAGLNPFLAIGLGLLACT
HHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AFGLLNGGLVTTIRLPPFIVTLGTLNIAFALTHIYSNEETISDLPATLTYLGKTFTVGQT
HHHHHCCCEEEEEECCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEECCCC
EITYGSLLMLALFGITWCILTQTSAGRHIYAVGDNPEAARLTGIRTRRVVLTVYAVAGLI
HHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHH
YGIASLLLVSRTGVGDPNAGQTDNLDSITAVVLGGTSLFGGRGSVVGTLLGALIVGVVRN
HHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEECCCEECCCCCHHHHHHHHHHHHHHHHC
GLQLIGTKSIYQVLITGILVILAVAIDQLARRRKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]