| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318724
Identifier: 158318724
GI number: 158318724
Start: 8521318
End: 8523081
Strand: Reverse
Name: 158318724
Synonym: Franean1_6995
Alternate gene names: NA
Gene position: 8523081-8521318 (Counterclockwise)
Preceding gene: 158318736
Following gene: 158318722
Centisome position: 94.89
GC content: 72.9
Gene sequence:
>1764_bases ATGGTCCGCGGCGGACAGTGGCGAATTCGACAATGCCGTGCTGCGGCTGGATCTCGCGGTGCGCAAGCGCGCCAGCCGGC TCGGCGAGGAGCCGGTTGTTCCCATGACGCCACCGGTCCGGGAACGGGTGAACAGAATGATTCATGTTCTCACCGAGGTG TCGGGCCGCGACACGTCGGCAGTGGGAGGCCGCGACGCCGTCGGCCCCGGGAACCGTCGGCGCCCCGGGTCGTCGGAGAC CCCGGCCCCGGCCGACACCGGCCACTGAGGGTGGCGGGCCGCTCGGGGTCGGTCCCACCGGCCGGCCGGACCGCGGGTGC CGGGCCTGAACCAGCGGCGCACGAGCTCTGGGGGGCCGAACTCGTCGTCCACCTGTTTGCTCCGGTGGATGGGCCCGAAG CGGCGGACGCGTACGGGTTTCTCCGGGACATCTGGTCGGCGTGCCGCCGCACTCTGAAGATGGGATCGGCTCTCGACCGG TTGGGAGTGCCCGCCGACCTGCCGGGTTCGGTCGGCGACCTGCCTTCCCGAGGTCTGCTCGCCGCCCAGCTCAACCTGGG CGACGGGACGCACCAGGCGCTGTTCCGGCGGGACCATGACCTGCTCTGTCTGTCCGTGATGCTCGCCCCGGCGGTGGACG ACGGTGCCCTCGACTGGTCCGCGCCGGAGGACCAGTGGAGCGGCGTGGCGGATGAGCTGCCCGCCTCGCTGGTCGGCGCC GTACGTCTTTACCAGGGGCATCTCGGCCGCTCGGAGGCGGGTCCGCGGGCGGTGGTGGCCGCGGCTCCCGAGCTCGCCCG CACCTGCGCCAACGCCTGGTCCGGGTGGCACCAGGCGCCCGGATGGGAGGAACGCGGTGCCACCACCGGCCTGGGGTTCG CGGTGTGGGAGCCGGCCGCTCCGGCGGACGACCAGATCGAGCGGAGGCTGCTTATCCTGGTTCCGGGCTCACGGGACGGA GAACTGGTCGCCTGGACGTGGAACCGCCGGGACGCCGCCGCGCCCGCTTTCCAACGCTATCTGGCCGGGGCGGCGAAGGT CCGCTACCAGTGGCGCGTTCGGGACGGCGGGGACGCGGTCCACGGCCTGCGCGACCGGCTCGACGAACGGGGAGCGCGGC TGCGGGAGTTCCTGCGCGACCCGGTCCCGTTCCCGGACCGCGTCGCCGCCTGTGTGCACCAGCTCCACGCCGACCAGGTG GACCTGACGACCGTCACCACGAGGATGACGGAGATGCGGCGCAGCGTGGAGATCTCCGGGGTCAACATGGCGGCGATCCT GGCGGCCGATGGGACCGTGCCTCGCGACGGCGACCCGTTCGCCACTGACCGGCGGCTGGTGGAGCACGTGGTCGGCCAGC TCGACGACGACCTGGTCTTCCTCGGCGCGGCGGACACGCGCGTCGAGGCGGTCCTGGCCCTCGCGGCCCGGTCGACCCAG CACGTCCGGTCTGCCGAGCACGTCCGGTCGGCACCGGACATCCGGCTCGATCCGGAGGAGATGACCCAACTGCGCGCGGA GCTCGCGGCGGCCTTCGGCGCCGGGGTACGGGCGTCTCAACTGCTCGAGGAGATCGGCCTGCCCCGCGCGCGCCAGTTCG TCCAGGGCGGTGCGACTCCGCTGGAATGGTGGACCGAGATGCTCCGGGAGCTCGGCAACGGCGCGGTCGACCGGCCGTAC CGTAAAACGCTCGAGGCCGCGCTGCGGGAGTACGGCTACAACGACGTTTTCGTCCGGCTGGCCCGTCGGCACGGGCTGCG CTGA
Upstream 100 bases:
>100_bases CTGACGCGGGGTTGGTGCCGCTACGCAGGGCTCTCGCGGCCCGACTCGTGCCGCGAGCCTGGGAACGGTTCGGTGTTCTC GTCGATAATCTGGAAACCGC
Downstream 100 bases:
>100_bases CCTCGGCACCTGTTCAGGACTGTCGGATGACGATGAGGCAGGTGTCGTCGTCGGTGTCCGGGGTGGTGTGCGCGAGCAGG TGATCGGCCCGGTGCGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MVRGGQWRIRQCRAAAGSRGAQARQPARRGAGCSHDATGPGTGEQNDSCSHRGVGPRHVGSGRPRRRRPREPSAPRVVGD PGPGRHRPLRVAGRSGSVPPAGRTAGAGPEPAAHELWGAELVVHLFAPVDGPEAADAYGFLRDIWSACRRTLKMGSALDR LGVPADLPGSVGDLPSRGLLAAQLNLGDGTHQALFRRDHDLLCLSVMLAPAVDDGALDWSAPEDQWSGVADELPASLVGA VRLYQGHLGRSEAGPRAVVAAAPELARTCANAWSGWHQAPGWEERGATTGLGFAVWEPAAPADDQIERRLLILVPGSRDG ELVAWTWNRRDAAAPAFQRYLAGAAKVRYQWRVRDGGDAVHGLRDRLDERGARLREFLRDPVPFPDRVAACVHQLHADQV DLTTVTTRMTEMRRSVEISGVNMAAILAADGTVPRDGDPFATDRRLVEHVVGQLDDDLVFLGAADTRVEAVLALAARSTQ HVRSAEHVRSAPDIRLDPEEMTQLRAELAAAFGAGVRASQLLEEIGLPRARQFVQGGATPLEWWTEMLRELGNGAVDRPY RKTLEAALREYGYNDVFVRLARRHGLR
Sequences:
>Translated_587_residues MVRGGQWRIRQCRAAAGSRGAQARQPARRGAGCSHDATGPGTGEQNDSCSHRGVGPRHVGSGRPRRRRPREPSAPRVVGD PGPGRHRPLRVAGRSGSVPPAGRTAGAGPEPAAHELWGAELVVHLFAPVDGPEAADAYGFLRDIWSACRRTLKMGSALDR LGVPADLPGSVGDLPSRGLLAAQLNLGDGTHQALFRRDHDLLCLSVMLAPAVDDGALDWSAPEDQWSGVADELPASLVGA VRLYQGHLGRSEAGPRAVVAAAPELARTCANAWSGWHQAPGWEERGATTGLGFAVWEPAAPADDQIERRLLILVPGSRDG ELVAWTWNRRDAAAPAFQRYLAGAAKVRYQWRVRDGGDAVHGLRDRLDERGARLREFLRDPVPFPDRVAACVHQLHADQV DLTTVTTRMTEMRRSVEISGVNMAAILAADGTVPRDGDPFATDRRLVEHVVGQLDDDLVFLGAADTRVEAVLALAARSTQ HVRSAEHVRSAPDIRLDPEEMTQLRAELAAAFGAGVRASQLLEEIGLPRARQFVQGGATPLEWWTEMLRELGNGAVDRPY RKTLEAALREYGYNDVFVRLARRHGLR >Mature_587_residues MVRGGQWRIRQCRAAAGSRGAQARQPARRGAGCSHDATGPGTGEQNDSCSHRGVGPRHVGSGRPRRRRPREPSAPRVVGD PGPGRHRPLRVAGRSGSVPPAGRTAGAGPEPAAHELWGAELVVHLFAPVDGPEAADAYGFLRDIWSACRRTLKMGSALDR LGVPADLPGSVGDLPSRGLLAAQLNLGDGTHQALFRRDHDLLCLSVMLAPAVDDGALDWSAPEDQWSGVADELPASLVGA VRLYQGHLGRSEAGPRAVVAAAPELARTCANAWSGWHQAPGWEERGATTGLGFAVWEPAAPADDQIERRLLILVPGSRDG ELVAWTWNRRDAAAPAFQRYLAGAAKVRYQWRVRDGGDAVHGLRDRLDERGARLREFLRDPVPFPDRVAACVHQLHADQV DLTTVTTRMTEMRRSVEISGVNMAAILAADGTVPRDGDPFATDRRLVEHVVGQLDDDLVFLGAADTRVEAVLALAARSTQ HVRSAEHVRSAPDIRLDPEEMTQLRAELAAAFGAGVRASQLLEEIGLPRARQFVQGGATPLEWWTEMLRELGNGAVDRPY RKTLEAALREYGYNDVFVRLARRHGLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63503; Mature: 63503
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRGGQWRIRQCRAAAGSRGAQARQPARRGAGCSHDATGPGTGEQNDSCSHRGVGPRHVG CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGRPRRRRPREPSAPRVVGDPGPGRHRPLRVAGRSGSVPPAGRTAGAGPEPAAHELWGAE CCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH LVVHLFAPVDGPEAADAYGFLRDIWSACRRTLKMGSALDRLGVPADLPGSVGDLPSRGLL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE AAQLNLGDGTHQALFRRDHDLLCLSVMLAPAVDDGALDWSAPEDQWSGVADELPASLVGA EEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH VRLYQGHLGRSEAGPRAVVAAAPELARTCANAWSGWHQAPGWEERGATTGLGFAVWEPAA HHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEEECCCC PADDQIERRLLILVPGSRDGELVAWTWNRRDAAAPAFQRYLAGAAKVRYQWRVRDGGDAV CCCHHHCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEEEEECCCCHHH HGLRDRLDERGARLREFLRDPVPFPDRVAACVHQLHADQVDLTTVTTRMTEMRRSVEISG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECC VNMAAILAADGTVPRDGDPFATDRRLVEHVVGQLDDDLVFLGAADTRVEAVLALAARSTQ CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH HVRSAEHVRSAPDIRLDPEEMTQLRAELAAAFGAGVRASQLLEEIGLPRARQFVQGGATP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCH LEWWTEMLRELGNGAVDRPYRKTLEAALREYGYNDVFVRLARRHGLR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MVRGGQWRIRQCRAAAGSRGAQARQPARRGAGCSHDATGPGTGEQNDSCSHRGVGPRHVG CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SGRPRRRRPREPSAPRVVGDPGPGRHRPLRVAGRSGSVPPAGRTAGAGPEPAAHELWGAE CCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH LVVHLFAPVDGPEAADAYGFLRDIWSACRRTLKMGSALDRLGVPADLPGSVGDLPSRGLL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE AAQLNLGDGTHQALFRRDHDLLCLSVMLAPAVDDGALDWSAPEDQWSGVADELPASLVGA EEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH VRLYQGHLGRSEAGPRAVVAAAPELARTCANAWSGWHQAPGWEERGATTGLGFAVWEPAA HHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEEECCCC PADDQIERRLLILVPGSRDGELVAWTWNRRDAAAPAFQRYLAGAAKVRYQWRVRDGGDAV CCCHHHCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEEEEECCCCHHH HGLRDRLDERGARLREFLRDPVPFPDRVAACVHQLHADQVDLTTVTTRMTEMRRSVEISG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECC VNMAAILAADGTVPRDGDPFATDRRLVEHVVGQLDDDLVFLGAADTRVEAVLALAARSTQ CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH HVRSAEHVRSAPDIRLDPEEMTQLRAELAAAFGAGVRASQLLEEIGLPRARQFVQGGATP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCH LEWWTEMLRELGNGAVDRPYRKTLEAALREYGYNDVFVRLARRHGLR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA