Click here to switch to the map view.

The map label for this gene is ywbN [H]

Identifier: 158318736

GI number: 158318736

Start: 8544478

End: 8545932

Strand: Reverse

Name: ywbN [H]

Synonym: Franean1_7007

Alternate gene names: 158318736

Gene position: 8545932-8544478 (Counterclockwise)

Preceding gene: 158318737

Following gene: 158318724

Centisome position: 95.14

GC content: 72.23

Gene sequence:

>1455_bases
GTGAGCCGACTGCCCGATCCCAGCGGCCCGGACGCCGTCGCCGCCGAGGACCCCACCACCGCCGTCACCTCCAGCGGCGC
CGGCGTGAACGACGCCGGCCCCACCACCGCCGTCACCTCCAGCGACGCCGGCGCGGGCGACGCCGACGGCGACGGCCCGC
GCAGCGGCCGCGGGAGCCAGCCGGCGCCCGCGGCACGCGGTTTCAGCCGTCGCCGCATGGTCGCGTTCCTCGGCGGCGCC
GCGGCTGTCGGCGCGGGCGGCACCGCCGCCGGCTTCGTCGCCTCCAACTCGGAGGAGGAGTCGCCGGGGTCGGGCCAGAG
GGTTCCGTTCTTCGGTTCGAACCAGGCCGGAATCGTCACCCCGGTACAGGACAGGCTGCACTTCGCCGCCTTCGACCTCA
GCCCGGCGGCCACCCGCGACGACCTGATCGCGCTGCTCACCGCTTGGACCAACGCGGCGTCCAGGATGACCGCCGGGCTG
GACGTCGGCACCGGCGCTGTCACCGGTGCGCCCGGCTCCCCGCCGGACGACACCGGTGAGGCGCTGGGGCTGTCGCCCGC
CCGGCTGACCCTCACACTCGGCTTCGGCACCAGCCTGTTCACCGACGCCAGCGGCAAGGACCGTTTCGGGATCGCCGCTT
CGCGACCGGCGCAGCTCGCCGACCTGCCCGCCTTCCCCGGCGACGCCCTCGACCCAGCGTCCAGCGACGGCGACCTGTGC
GTGCAGGCCTGTGCCGACGACCCGCAGGTGGCCGTGCACGCCATCCGCAACCTGGCCCGCCTCGCCCGGGGCGCCGCCTC
GGTGCGCTACTCCCAGCTCGGGTTCGGCCGCACCAGCTCCACCTCGACCGGCCAGGCCACCCCACGCAACATGATGGGTT
TCAAGGACGGCACCGCCAACATCAAGGCCGAGGACGCGGCCACGATGAACACCCACGTCTGGGCCCAGCCCGGTGACGGG
CCGGACTGGATGACCGGCGGCAGCTATCTCGTCAGCCGCCGCATCCGCATGCTCATCGAGCCCTGGGACAGCACCCCGCT
CACCGAACAGGAACGGGTCATCGGCCGCGCCAAGGGAAGCGGAGCTCCGCTCGGCCAACGGGACGAGTTCGACCCGTTGG
ACTTCGCGGCGAAGGACTCCGCCGGAGAGCTGGTCGTCGACACCAAGGCCCACGTACGGCTCGCCCACCCGACCCAGAAC
AACGGCGCCGTGATCCTGCGCCGTGGCTACTCCTTCACCAACGGCACCGACAACCTCGGCCGCCTCGACGCCGGGCTGTT
CTTCATCGCCTATCAGCGGGACCCGCGGACCCAGTTCGTCACAATTCAGAAATCACTGGCCGGCAGGTCCAACGACGCGC
TCAACGAATACATTCAGCACGTCGGCAGCGGCCTGTACGCCTGCCCGCCGGGCGTCCAGCCAGGACAGTACTGGGGCCAG
AAGCTCTTCGCCTGA

Upstream 100 bases:

>100_bases
CCTACGACAGCCTCACCCAGGACGAGGTCAAGGCCCTCGCCGTCGAGGTCGACGCCATCTCCGAGCCCATCGGACAGATC
GCCGGAGTCGTGACCAGCAA

Downstream 100 bases:

>100_bases
GGCGATCCCAGTCGCGACCTCAGGTACCACAGCAAATCCGATTACCGTGGGTCCACCCGCTGGCTGGTTTTCCGGCGCAG
CGGGTGGACGTCACGTGGGT

Product: Dyp-type peroxidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MSRLPDPSGPDAVAAEDPTTAVTSSGAGVNDAGPTTAVTSSDAGAGDADGDGPRSGRGSQPAPAARGFSRRRMVAFLGGA
AAVGAGGTAAGFVASNSEEESPGSGQRVPFFGSNQAGIVTPVQDRLHFAAFDLSPAATRDDLIALLTAWTNAASRMTAGL
DVGTGAVTGAPGSPPDDTGEALGLSPARLTLTLGFGTSLFTDASGKDRFGIAASRPAQLADLPAFPGDALDPASSDGDLC
VQACADDPQVAVHAIRNLARLARGAASVRYSQLGFGRTSSTSTGQATPRNMMGFKDGTANIKAEDAATMNTHVWAQPGDG
PDWMTGGSYLVSRRIRMLIEPWDSTPLTEQERVIGRAKGSGAPLGQRDEFDPLDFAAKDSAGELVVDTKAHVRLAHPTQN
NGAVILRRGYSFTNGTDNLGRLDAGLFFIAYQRDPRTQFVTIQKSLAGRSNDALNEYIQHVGSGLYACPPGVQPGQYWGQ
KLFA

Sequences:

>Translated_484_residues
MSRLPDPSGPDAVAAEDPTTAVTSSGAGVNDAGPTTAVTSSDAGAGDADGDGPRSGRGSQPAPAARGFSRRRMVAFLGGA
AAVGAGGTAAGFVASNSEEESPGSGQRVPFFGSNQAGIVTPVQDRLHFAAFDLSPAATRDDLIALLTAWTNAASRMTAGL
DVGTGAVTGAPGSPPDDTGEALGLSPARLTLTLGFGTSLFTDASGKDRFGIAASRPAQLADLPAFPGDALDPASSDGDLC
VQACADDPQVAVHAIRNLARLARGAASVRYSQLGFGRTSSTSTGQATPRNMMGFKDGTANIKAEDAATMNTHVWAQPGDG
PDWMTGGSYLVSRRIRMLIEPWDSTPLTEQERVIGRAKGSGAPLGQRDEFDPLDFAAKDSAGELVVDTKAHVRLAHPTQN
NGAVILRRGYSFTNGTDNLGRLDAGLFFIAYQRDPRTQFVTIQKSLAGRSNDALNEYIQHVGSGLYACPPGVQPGQYWGQ
KLFA
>Mature_483_residues
SRLPDPSGPDAVAAEDPTTAVTSSGAGVNDAGPTTAVTSSDAGAGDADGDGPRSGRGSQPAPAARGFSRRRMVAFLGGAA
AVGAGGTAAGFVASNSEEESPGSGQRVPFFGSNQAGIVTPVQDRLHFAAFDLSPAATRDDLIALLTAWTNAASRMTAGLD
VGTGAVTGAPGSPPDDTGEALGLSPARLTLTLGFGTSLFTDASGKDRFGIAASRPAQLADLPAFPGDALDPASSDGDLCV
QACADDPQVAVHAIRNLARLARGAASVRYSQLGFGRTSSTSTGQATPRNMMGFKDGTANIKAEDAATMNTHVWAQPGDGP
DWMTGGSYLVSRRIRMLIEPWDSTPLTEQERVIGRAKGSGAPLGQRDEFDPLDFAAKDSAGELVVDTKAHVRLAHPTQNN
GAVILRRGYSFTNGTDNLGRLDAGLFFIAYQRDPRTQFVTIQKSLAGRSNDALNEYIQHVGSGLYACPPGVQPGQYWGQK
LFA

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI1787255, Length=427, Percent_Identity=37.2365339578454, Blast_Score=258, Evalue=5e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314
- InterPro:   IPR006313
- InterPro:   IPR006311
- InterPro:   IPR019546 [H]

Pfam domain/function: PF04261 Dyp_perox; PF10518 TAT_signal [H]

EC number: NA

Molecular weight: Translated: 49924; Mature: 49792

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLPDPSGPDAVAAEDPTTAVTSSGAGVNDAGPTTAVTSSDAGAGDADGDGPRSGRGSQ
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
PAPAARGFSRRRMVAFLGGAAAVGAGGTAAGFVASNSEEESPGSGQRVPFFGSNQAGIVT
CCHHHCCHHHHEEEEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCEEC
PVQDRLHFAAFDLSPAATRDDLIALLTAWTNAASRMTAGLDVGTGAVTGAPGSPPDDTGE
CHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCC
ALGLSPARLTLTLGFGTSLFTDASGKDRFGIAASRPAQLADLPAFPGDALDPASSDGDLC
CCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEE
VQACADDPQVAVHAIRNLARLARGAASVRYSQLGFGRTSSTSTGQATPRNMMGFKDGTAN
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCC
IKAEDAATMNTHVWAQPGDGPDWMTGGSYLVSRRIRMLIEPWDSTPLTEQERVIGRAKGS
EEECCCCEECEEEEECCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCCC
GAPLGQRDEFDPLDFAAKDSAGELVVDTKAHVRLAHPTQNNGAVILRRGYSFTNGTDNLG
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCCCC
RLDAGLFFIAYQRDPRTQFVTIQKSLAGRSNDALNEYIQHVGSGLYACPPGVQPGQYWGQ
CCCCCEEEEEEECCCCCEEEEEEHHHCCCCCHHHHHHHHHHCCCCEECCCCCCCHHHHHH
KLFA
HHCC
>Mature Secondary Structure 
SRLPDPSGPDAVAAEDPTTAVTSSGAGVNDAGPTTAVTSSDAGAGDADGDGPRSGRGSQ
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
PAPAARGFSRRRMVAFLGGAAAVGAGGTAAGFVASNSEEESPGSGQRVPFFGSNQAGIVT
CCHHHCCHHHHEEEEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCEEC
PVQDRLHFAAFDLSPAATRDDLIALLTAWTNAASRMTAGLDVGTGAVTGAPGSPPDDTGE
CHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCC
ALGLSPARLTLTLGFGTSLFTDASGKDRFGIAASRPAQLADLPAFPGDALDPASSDGDLC
CCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEE
VQACADDPQVAVHAIRNLARLARGAASVRYSQLGFGRTSSTSTGQATPRNMMGFKDGTAN
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCC
IKAEDAATMNTHVWAQPGDGPDWMTGGSYLVSRRIRMLIEPWDSTPLTEQERVIGRAKGS
EEECCCCEECEEEEECCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCCC
GAPLGQRDEFDPLDFAAKDSAGELVVDTKAHVRLAHPTQNNGAVILRRGYSFTNGTDNLG
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCCCC
RLDAGLFFIAYQRDPRTQFVTIQKSLAGRSNDALNEYIQHVGSGLYACPPGVQPGQYWGQ
CCCCCEEEEEEECCCCCEEEEEEHHHCCCCCHHHHHHHHHHCCCCEECCCCCCCHHHHHH
KLFA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]