BacMap

Definition	Frankia sp. EAN1pec chromosome, complete genome.
Accession	NC_009921
Length	8,982,042

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The map label for this gene is fabG [H]

Identifier: 158318714

GI number: 158318714

Start: 8505625

End: 8506410

Strand: Direct

Name: fabG [H]

Synonym: Franean1_6983

Alternate gene names: 158318714

Gene position: 8505625-8506410 (Clockwise)

Preceding gene: 158318710

Following gene: 158318716

Centisome position: 94.7

GC content: 73.16

Gene sequence:

>786_bases
ATGACCATCAGTGACCGGCTCGACGGCCGCCCCGCGCTGGTCACCGGAGCCAGCAAGGGCACCGGCGCCGCCATCGCCGA
CCGGCTCCGCGAGGCCGGCGCGATCGTGCTGGCCACCGCCCGCACCCGCCCGTCCGGCCAGGCCGGGCCGGACCTGTTCA
TCCCCGCCGACCTCACCACCACCGAGGGCGTCGCCGCCGTCGTCGACCAGGTGCGGAACCGGTTCGGCACGCTGGACATC
GTCGTGCACACCCTCGGCGGATCGCAGGCCCCACCCGGGGGTTTCGCCGCCCTCACCGATCAGCACTGGGACCACGAGCT
GCGTCTCAACCTGCTCGCCGCCGTCCGGCTGGACCGTGCCCTGCTGCCGGCGATGATCGACGCCGGCGGCGGGGCGGTGG
TGCACGTGTCGTCCATCCAACGGCGAATGCCGCTGTACGAGGCGACCCTCGGCTACGCGGCGGCCAAGGCCGCGCTCACC
ACCTACAGCAAGGGCCTGGCCAACGAGGTCGGTCCGCGTGGCGTTCGGGTGAACGTCGTGTCCCCCGGCTTCATCCAGAC
CGCCGGCGCCGACGGTCTGATCGATCGCATCGCAGCGAGCCAGGCCATCTCCCGCGGGCAGGCGCTGGAGCAGGTCATGG
ATTCCCTCGGCGGCATCCCACTCGGCCGCCCCGCGCAGCCCACCGAGGTCGCCGAACTCGTTGCCTTCCTCGTGTCCGAC
CGTGCGGCCGCCATCACCGGCGCCGAGCACACCGTCGACGGCGGCACGGTGCCGACCATCGGCTGA

Upstream 100 bases:

>100_bases
GGACGGCCGCCGCTCGTGGTTTGACCCTCTCCCGGCGGGAGGCTCGACGGTGGCCGCATGACGAATCAGATCGGAGCAGA
TCGGATCAGGGTGGGCCGCC

Downstream 100 bases:

>100_bases
TCATCCGCCCGGCCTGGCCCGCGGCACCCGGCGCCGCGGGCCAGGCCGGGGTTCAGGTGATCTGGACGCTGGGTGGATGT
CCGTTCCAGGTGACGAAGCA

Product: short chain dehydrogenase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MTISDRLDGRPALVTGASKGTGAAIADRLREAGAIVLATARTRPSGQAGPDLFIPADLTTTEGVAAVVDQVRNRFGTLDI
VVHTLGGSQAPPGGFAALTDQHWDHELRLNLLAAVRLDRALLPAMIDAGGGAVVHVSSIQRRMPLYEATLGYAAAKAALT
TYSKGLANEVGPRGVRVNVVSPGFIQTAGADGLIDRIAASQAISRGQALEQVMDSLGGIPLGRPAQPTEVAELVAFLVSD
RAAAITGAEHTVDGGTVPTIG

Sequences:

>Translated_261_residues
MTISDRLDGRPALVTGASKGTGAAIADRLREAGAIVLATARTRPSGQAGPDLFIPADLTTTEGVAAVVDQVRNRFGTLDI
VVHTLGGSQAPPGGFAALTDQHWDHELRLNLLAAVRLDRALLPAMIDAGGGAVVHVSSIQRRMPLYEATLGYAAAKAALT
TYSKGLANEVGPRGVRVNVVSPGFIQTAGADGLIDRIAASQAISRGQALEQVMDSLGGIPLGRPAQPTEVAELVAFLVSD
RAAAITGAEHTVDGGTVPTIG
>Mature_260_residues
TISDRLDGRPALVTGASKGTGAAIADRLREAGAIVLATARTRPSGQAGPDLFIPADLTTTEGVAAVVDQVRNRFGTLDIV
VHTLGGSQAPPGGFAALTDQHWDHELRLNLLAAVRLDRALLPAMIDAGGGAVVHVSSIQRRMPLYEATLGYAAAKAALTT
YSKGLANEVGPRGVRVNVVSPGFIQTAGADGLIDRIAASQAISRGQALEQVMDSLGGIPLGRPAQPTEVAELVAFLVSDR
AAAITGAEHTVDGGTVPTIG

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=266, Percent_Identity=31.203007518797, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI59889578, Length=204, Percent_Identity=35.2941176470588, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI19923817, Length=264, Percent_Identity=27.6515151515151, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI126723750, Length=267, Percent_Identity=28.4644194756554, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI7705925, Length=263, Percent_Identity=30.0380228136882, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI15277342, Length=272, Percent_Identity=29.0441176470588, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI66933014, Length=188, Percent_Identity=29.2553191489362, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=28.2258064516129, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI10190704, Length=266, Percent_Identity=27.4436090225564, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI109715829, Length=252, Percent_Identity=27.3809523809524, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI31542939, Length=228, Percent_Identity=26.7543859649123, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=29.0697674418605, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=32.4607329842932, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4503301, Length=248, Percent_Identity=30.6451612903226, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI126723191, Length=202, Percent_Identity=30.1980198019802, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787335, Length=255, Percent_Identity=34.9019607843137, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87082100, Length=260, Percent_Identity=30.7692307692308, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1789378, Length=264, Percent_Identity=31.0606060606061, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=32.4110671936759, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI2367175, Length=262, Percent_Identity=29.7709923664122, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786812, Length=250, Percent_Identity=31.6, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789208, Length=264, Percent_Identity=24.6212121212121, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790717, Length=260, Percent_Identity=22.3076923076923, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787905, Length=261, Percent_Identity=29.8850574712644, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI87082160, Length=259, Percent_Identity=25.0965250965251, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788459, Length=192, Percent_Identity=28.125, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1787545, Length=270, Percent_Identity=26.2962962962963, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=33.7209302325581, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17562910, Length=275, Percent_Identity=31.6363636363636, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71994600, Length=262, Percent_Identity=31.6793893129771, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=29.277566539924, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17538480, Length=272, Percent_Identity=29.7794117647059, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=32.8125, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17562904, Length=276, Percent_Identity=30.7971014492754, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17563726, Length=270, Percent_Identity=32.962962962963, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=263, Percent_Identity=28.5171102661597, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17565030, Length=276, Percent_Identity=29.7101449275362, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17562906, Length=273, Percent_Identity=32.2344322344322, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17544670, Length=273, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI193204405, Length=276, Percent_Identity=31.1594202898551, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI72000259, Length=268, Percent_Identity=29.1044776119403, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17551412, Length=277, Percent_Identity=27.4368231046931, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=280, Percent_Identity=31.4285714285714, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17560220, Length=277, Percent_Identity=29.9638989169675, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=275, Percent_Identity=28.7272727272727, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=274, Percent_Identity=28.1021897810219, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17560332, Length=281, Percent_Identity=29.1814946619217, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=279, Percent_Identity=28.3154121863799, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=277, Percent_Identity=29.9638989169675, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=287, Percent_Identity=28.9198606271777, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=258, Percent_Identity=27.906976744186, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17555706, Length=262, Percent_Identity=24.4274809160305, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI23397609, Length=258, Percent_Identity=35.6589147286822, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI21355319, Length=259, Percent_Identity=30.1158301158301, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=31.6205533596838, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI28571526, Length=255, Percent_Identity=29.8039215686275, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=29.296875, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24639444, Length=259, Percent_Identity=28.957528957529, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24644339, Length=261, Percent_Identity=27.5862068965517, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21358495, Length=199, Percent_Identity=28.643216080402, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24644337, Length=242, Percent_Identity=29.7520661157025, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24584744, Length=205, Percent_Identity=28.780487804878, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28574402, Length=205, Percent_Identity=28.780487804878, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26721; Mature: 26590

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISDRLDGRPALVTGASKGTGAAIADRLREAGAIVLATARTRPSGQAGPDLFIPADLTT
CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEECCCCC
TEGVAAVVDQVRNRFGTLDIVVHTLGGSQAPPGGFAALTDQHWDHELRLNLLAAVRLDRA
CHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
LLPAMIDAGGGAVVHVSSIQRRMPLYEATLGYAAAKAALTTYSKGLANEVGPRGVRVNVV
HHHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
SPGFIQTAGADGLIDRIAASQAISRGQALEQVMDSLGGIPLGRPAQPTEVAELVAFLVSD
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
RAAAITGAEHTVDGGTVPTIG
CHHEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
TISDRLDGRPALVTGASKGTGAAIADRLREAGAIVLATARTRPSGQAGPDLFIPADLTT
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEECCCCC
TEGVAAVVDQVRNRFGTLDIVVHTLGGSQAPPGGFAALTDQHWDHELRLNLLAAVRLDRA
CHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHH
LLPAMIDAGGGAVVHVSSIQRRMPLYEATLGYAAAKAALTTYSKGLANEVGPRGVRVNVV
HHHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
SPGFIQTAGADGLIDRIAASQAISRGQALEQVMDSLGGIPLGRPAQPTEVAELVAFLVSD
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
RAAAITGAEHTVDGGTVPTIG
CHHEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]