| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318689
Identifier: 158318689
GI number: 158318689
Start: 8479090
End: 8481048
Strand: Reverse
Name: 158318689
Synonym: Franean1_6957
Alternate gene names: NA
Gene position: 8481048-8479090 (Counterclockwise)
Preceding gene: 158318690
Following gene: 158318684
Centisome position: 94.42
GC content: 68.04
Gene sequence:
>1959_bases ATGCGCCAGGAACGAGAACCGGAAAGTCCGGTGGGAGTTCATGATCTGATACGTCATCACTGGATTTCGAGTAGGGATTT CGACGCGCTCGCGTCCGGAACCGATCAACACGGGCTGATCTGCCAGCTTCGGGTTGCCGAACGTAGTTACCGATATCTCT CGCTCCGTAGTATCCTTGATTTCGCCCGCGGGCATGAGCCGACAACCGGGCTGCTGTCGTCTCCTGACACGGCATGGGAC CTTCTCGTGGAGGCCGAGCGCGTCGCTCCGGCCATGGTCACAGCCATCCTGGACCTACCGAGCGTCGGGGCCTGGGTGGC CCGGGCGCTGCGGCGGACCCGTGGGCTTCTGTACGACGAGATTCCGCTGTGGGTCGACCTCGGCTATCTCCATCTGCTCT CGGCGGCCGCCGGTATCCGATGCGGCATCCCTTTTAGGCTGGATGTTCCGCTACGCCACGGTCAGCTTCACCTTCCGACG CTCGGCTCCATCGTGCTGCCGGGCAAGGAGATCTGGGGTTCGACGACCGTCATCTCCGACGGGCGATCGGCGCATGCCCT CCTGCCTGTGGGCAAGATCCGTCTCGCGGGGCGCGACCCGGTGGACGATCCACCCGGCTGGAGGAGAACGACGAGCCTGG ATGCGCGGCACCGCGGGGCGGCGGCCACCGTCTACCTTGACAGCAGCGACCCCTATCGCATGGTCGAAACGCCCGCGCTG CCCGAGAACATCGGCATACCCGTCCAACGGCACTGGGAGTCCCTGTTCCAGGAAGCCTGGGCGGAACTGGTGGAACAGGA CAGCGAGGTTGCCCGATGCGTGGCCGAGTGCACCCTCACGCTGGTCCCGCTGCCCCGGGCAGAGCGGTTCAGGGAAAGAA GCGCATCGTTCGGCGACTCGTTCGGCGGGGTTATTCTATCGCTGCCGGATAGCCCGGAGCGGTTCGCTGTGACCCTGGTA CACGAAATGCAGCACGCAAAACTCGGCATCCTACTCCATCTATTCTCGTTCTTGCGCGGGGAAGGAAGCATGCTTGCCTA TGCGCCGTGGCGTGACGATCCCCGACCCCTGCAGGGCCTGCTGCAGGGGATCTACGCCTTTTTCGGCGTCGCCGGATTCT GGCGTCGTCGCTTCGCCATGGCGAAGGGAGAGGAAGCGGCTCTCGCCGGCTTCGAGTTCGCCCTGTGGCGCGGCAAGGTG AGCGAGGCCACCGCACACGCCAGGAGTCGTCAGGAGTTCACGGCCCTCGGCCATCGCTTTCTGACCGGGATAGCCACCAC AGTCACGGCGTGGTCGGCCGAACCGGTGTCGCCGTACTACGCAGGGCTGGCGAATCTCGCCGCGGCGGACCATCGTGCGG GCTGGCGCGTCCACCACCTCATCCCTCCGGCCGCCGACGTCGCGAGCCTGTCCCGGGCCTGGATCGCCGGGACGGATCCG CGTGAGCTTCGTGTCCCCGGCCCGTCCGCGCTCGTCCCGGATGGGAAGGTGCCCGACCTGGACACCCTGGTCGTCCTGGT CCGGTACTGGTTGGCCGACCGGGAGCTCTTCCGCCAGATCGAACGGAATGGCCAGGTCGGCAGCGTGGTCACCGGCGCGA CGGCGGCGGATCTCCACCTGGTCGCCGGACGCCACGACGAGGCCGCCCGTGCCTATCTCGACGAACTCGGGGAGCCCTCG CCCGGACTGACTGCCTGGACGAGGCTCGGATCAGCGCTCGCCACGAGCCCCGACCACCGGATGGCGGCGGCCGGCCGTGC CCTGCTCACCCGGCCCGAGCTCGTCCGGGCGGTGGCCCGTGCCGTCGAGGCGGACACCGGCCGCAGACCAGCGCCGGTCG ACCTCGCCGGATGGCTGGGTGAGCTTCCCCCGAACGAGGACCGGGTCCGCGGCACGGGGGCGGACGACGTGTCCGCCCCC GCCCCGAGGCCCGGCGACTCGCAGGAAGCAGTGCACTGA
Upstream 100 bases:
>100_bases GCCCGGACGGCGTCGTGCGGCAAAGCCTGGACTGGCTCGTCGCCCGGATCGCTCTTCAGGACGAGCGAAGCGGAGGCGGA ATGAAAAATAGAACTGACTG
Downstream 100 bases:
>100_bases TCGGCCCGCTATCGTGGGCGCAACGAGCCGCCCGCACGCGTCGGCGTCTCGGCCGACGCCCGCCTCACACGAACGGATCA ATGTCGCAGTCGGCCCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain Protein; PE-PGRS Family Protein
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MRQEREPESPVGVHDLIRHHWISSRDFDALASGTDQHGLICQLRVAERSYRYLSLRSILDFARGHEPTTGLLSSPDTAWD LLVEAERVAPAMVTAILDLPSVGAWVARALRRTRGLLYDEIPLWVDLGYLHLLSAAAGIRCGIPFRLDVPLRHGQLHLPT LGSIVLPGKEIWGSTTVISDGRSAHALLPVGKIRLAGRDPVDDPPGWRRTTSLDARHRGAAATVYLDSSDPYRMVETPAL PENIGIPVQRHWESLFQEAWAELVEQDSEVARCVAECTLTLVPLPRAERFRERSASFGDSFGGVILSLPDSPERFAVTLV HEMQHAKLGILLHLFSFLRGEGSMLAYAPWRDDPRPLQGLLQGIYAFFGVAGFWRRRFAMAKGEEAALAGFEFALWRGKV SEATAHARSRQEFTALGHRFLTGIATTVTAWSAEPVSPYYAGLANLAAADHRAGWRVHHLIPPAADVASLSRAWIAGTDP RELRVPGPSALVPDGKVPDLDTLVVLVRYWLADRELFRQIERNGQVGSVVTGATAADLHLVAGRHDEAARAYLDELGEPS PGLTAWTRLGSALATSPDHRMAAAGRALLTRPELVRAVARAVEADTGRRPAPVDLAGWLGELPPNEDRVRGTGADDVSAP APRPGDSQEAVH
Sequences:
>Translated_652_residues MRQEREPESPVGVHDLIRHHWISSRDFDALASGTDQHGLICQLRVAERSYRYLSLRSILDFARGHEPTTGLLSSPDTAWD LLVEAERVAPAMVTAILDLPSVGAWVARALRRTRGLLYDEIPLWVDLGYLHLLSAAAGIRCGIPFRLDVPLRHGQLHLPT LGSIVLPGKEIWGSTTVISDGRSAHALLPVGKIRLAGRDPVDDPPGWRRTTSLDARHRGAAATVYLDSSDPYRMVETPAL PENIGIPVQRHWESLFQEAWAELVEQDSEVARCVAECTLTLVPLPRAERFRERSASFGDSFGGVILSLPDSPERFAVTLV HEMQHAKLGILLHLFSFLRGEGSMLAYAPWRDDPRPLQGLLQGIYAFFGVAGFWRRRFAMAKGEEAALAGFEFALWRGKV SEATAHARSRQEFTALGHRFLTGIATTVTAWSAEPVSPYYAGLANLAAADHRAGWRVHHLIPPAADVASLSRAWIAGTDP RELRVPGPSALVPDGKVPDLDTLVVLVRYWLADRELFRQIERNGQVGSVVTGATAADLHLVAGRHDEAARAYLDELGEPS PGLTAWTRLGSALATSPDHRMAAAGRALLTRPELVRAVARAVEADTGRRPAPVDLAGWLGELPPNEDRVRGTGADDVSAP APRPGDSQEAVH >Mature_652_residues MRQEREPESPVGVHDLIRHHWISSRDFDALASGTDQHGLICQLRVAERSYRYLSLRSILDFARGHEPTTGLLSSPDTAWD LLVEAERVAPAMVTAILDLPSVGAWVARALRRTRGLLYDEIPLWVDLGYLHLLSAAAGIRCGIPFRLDVPLRHGQLHLPT LGSIVLPGKEIWGSTTVISDGRSAHALLPVGKIRLAGRDPVDDPPGWRRTTSLDARHRGAAATVYLDSSDPYRMVETPAL PENIGIPVQRHWESLFQEAWAELVEQDSEVARCVAECTLTLVPLPRAERFRERSASFGDSFGGVILSLPDSPERFAVTLV HEMQHAKLGILLHLFSFLRGEGSMLAYAPWRDDPRPLQGLLQGIYAFFGVAGFWRRRFAMAKGEEAALAGFEFALWRGKV SEATAHARSRQEFTALGHRFLTGIATTVTAWSAEPVSPYYAGLANLAAADHRAGWRVHHLIPPAADVASLSRAWIAGTDP RELRVPGPSALVPDGKVPDLDTLVVLVRYWLADRELFRQIERNGQVGSVVTGATAADLHLVAGRHDEAARAYLDELGEPS PGLTAWTRLGSALATSPDHRMAAAGRALLTRPELVRAVARAVEADTGRRPAPVDLAGWLGELPPNEDRVRGTGADDVSAP APRPGDSQEAVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71249; Mature: 71249
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQEREPESPVGVHDLIRHHWISSRDFDALASGTDQHGLICQLRVAERSYRYLSLRSILD CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHH FARGHEPTTGLLSSPDTAWDLLVEAERVAPAMVTAILDLPSVGAWVARALRRTRGLLYDE HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECC IPLWVDLGYLHLLSAAAGIRCGIPFRLDVPLRHGQLHLPTLGSIVLPGKEIWGSTTVISD CCHHHHHHHHHHHHHHCCCEECCCEEECCCCCCCEEECCCCCCEEECCHHHCCCCEEEEC GRSAHALLPVGKIRLAGRDPVDDPPGWRRTTSLDARHRGAAATVYLDSSDPYRMVETPAL CCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCEEEECCCC PENIGIPVQRHWESLFQEAWAELVEQDSEVARCVAECTLTLVPLPRAERFRERSASFGDS CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCC FGGVILSLPDSPERFAVTLVHEMQHAKLGILLHLFSFLRGEGSMLAYAPWRDDPRPLQGL CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH LQGIYAFFGVAGFWRRRFAMAKGEEAALAGFEFALWRGKVSEATAHARSRQEFTALGHRF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LTGIATTVTAWSAEPVSPYYAGLANLAAADHRAGWRVHHLIPPAADVASLSRAWIAGTDP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCC RELRVPGPSALVPDGKVPDLDTLVVLVRYWLADRELFRQIERNGQVGSVVTGATAADLHL CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHCEEE VAGRHDEAARAYLDELGEPSPGLTAWTRLGSALATSPDHRMAAAGRALLTRPELVRAVAR EECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCHHHHCCHHHHHHHHH AVEADTGRRPAPVDLAGWLGELPPNEDRVRGTGADDVSAPAPRPGDSQEAVH HHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRQEREPESPVGVHDLIRHHWISSRDFDALASGTDQHGLICQLRVAERSYRYLSLRSILD CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHH FARGHEPTTGLLSSPDTAWDLLVEAERVAPAMVTAILDLPSVGAWVARALRRTRGLLYDE HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECC IPLWVDLGYLHLLSAAAGIRCGIPFRLDVPLRHGQLHLPTLGSIVLPGKEIWGSTTVISD CCHHHHHHHHHHHHHHCCCEECCCEEECCCCCCCEEECCCCCCEEECCHHHCCCCEEEEC GRSAHALLPVGKIRLAGRDPVDDPPGWRRTTSLDARHRGAAATVYLDSSDPYRMVETPAL CCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCEEEECCCC PENIGIPVQRHWESLFQEAWAELVEQDSEVARCVAECTLTLVPLPRAERFRERSASFGDS CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEECCCHHHHHHHHHCCCCCC FGGVILSLPDSPERFAVTLVHEMQHAKLGILLHLFSFLRGEGSMLAYAPWRDDPRPLQGL CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH LQGIYAFFGVAGFWRRRFAMAKGEEAALAGFEFALWRGKVSEATAHARSRQEFTALGHRF HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LTGIATTVTAWSAEPVSPYYAGLANLAAADHRAGWRVHHLIPPAADVASLSRAWIAGTDP HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCC RELRVPGPSALVPDGKVPDLDTLVVLVRYWLADRELFRQIERNGQVGSVVTGATAADLHL CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHCEEE VAGRHDEAARAYLDELGEPSPGLTAWTRLGSALATSPDHRMAAAGRALLTRPELVRAVAR EECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCHHHHCCHHHHHHHHH AVEADTGRRPAPVDLAGWLGELPPNEDRVRGTGADDVSAPAPRPGDSQEAVH HHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA