| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fabG [H]
Identifier: 158318690
GI number: 158318690
Start: 8481563
End: 8482366
Strand: Reverse
Name: fabG [H]
Synonym: Franean1_6958
Alternate gene names: 158318690
Gene position: 8482366-8481563 (Counterclockwise)
Preceding gene: 158318691
Following gene: 158318689
Centisome position: 94.44
GC content: 70.27
Gene sequence:
>804_bases ATGACCGGGTTATTCGAAGGCAAGACCGCTCTCATCACCGGCGCCGGCTCCGGAATGGGCCGAGCCATCACCCTGCGACT CGTCGGGCAGGGCGCCTCGGTGCTCGCCCTGGACATCGACGCCGACCGGCTCGTCGAGACGAAAGCCCTCGCGGCAAAGG CCCTCGAGACGGAGGCCCTCGCGACGGAGGCCCTCGAGACGGCCCGAGTGGCGGGCACGGTGTCCGTCCGCCAGGCCGAC GTCAGCGACCCCGGCGCATGCGCCGAGGCGGTGGCCGCCTGCGTGGCGGAGTTCGGGAAACTGGACGTGCTGGGCAACGT CGCCGGCATCTACCTCGCCGAGCACACCACCAAGGTCACCGTCGAGCAGTACCGCCGCGTGATGGGCGTCAACCTCGACG CCTGTTTCTTCCTGGCTCAGGCCGCCATCCCGCACCTGCTGGAGACGGGTGGCAACATTGTCAACATCGCGTCCAACGCC GGGCTCCAGGGCGTGCCTTACTCCGCGGCCTATTCCATGAGCAAGGGCGGCGTGGTCGCGCTGACCCGGTCGCTGGCCGT CGAGTTCCTGAAGACGCCGCTGCGGGTCAACGCCATCGCCCCGGCGGGCACCAACACCAACATCGCGACCTCGGGATCGT TCCCGTCCGGCATGGACCCCGACCTCGCCCGGCGGATGGCGGGCCTGCGCGGCCTGGCCGAGCCGGAGGAGATCGCCGCC CTGTTCTCGTTCCTCGCCTCCGCCGACGCCCGCTCGGTGACCGGCGCCGTCTACACCGTCGACAACGGCCTCACCATCAG CTGA
Upstream 100 bases:
>100_bases CGGGATCTCTGACGGGCCTGCCCGCCACCGCGGAGGCGTTCGCGGTCCGCTGGGCGCCCGCGCCGCTCCGGAGCCACCGA CCAAGCGAAGGACGTCGATT
Downstream 100 bases:
>100_bases CCACCCAGCCGCCACCGTCACCCTTCGCCGGCGGCCGGTTCGCTGCCGGCGAAGGGGCGTCGAATCCCGGCCGGATACCG GATGGGGTCCGTCGGGCCCG
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTGLFEGKTALITGAGSGMGRAITLRLVGQGASVLALDIDADRLVETKALAAKALETEALATEALETARVAGTVSVRQAD VSDPGACAEAVAACVAEFGKLDVLGNVAGIYLAEHTTKVTVEQYRRVMGVNLDACFFLAQAAIPHLLETGGNIVNIASNA GLQGVPYSAAYSMSKGGVVALTRSLAVEFLKTPLRVNAIAPAGTNTNIATSGSFPSGMDPDLARRMAGLRGLAEPEEIAA LFSFLASADARSVTGAVYTVDNGLTIS
Sequences:
>Translated_267_residues MTGLFEGKTALITGAGSGMGRAITLRLVGQGASVLALDIDADRLVETKALAAKALETEALATEALETARVAGTVSVRQAD VSDPGACAEAVAACVAEFGKLDVLGNVAGIYLAEHTTKVTVEQYRRVMGVNLDACFFLAQAAIPHLLETGGNIVNIASNA GLQGVPYSAAYSMSKGGVVALTRSLAVEFLKTPLRVNAIAPAGTNTNIATSGSFPSGMDPDLARRMAGLRGLAEPEEIAA LFSFLASADARSVTGAVYTVDNGLTIS >Mature_266_residues TGLFEGKTALITGAGSGMGRAITLRLVGQGASVLALDIDADRLVETKALAAKALETEALATEALETARVAGTVSVRQADV SDPGACAEAVAACVAEFGKLDVLGNVAGIYLAEHTTKVTVEQYRRVMGVNLDACFFLAQAAIPHLLETGGNIVNIASNAG LQGVPYSAAYSMSKGGVVALTRSLAVEFLKTPLRVNAIAPAGTNTNIATSGSFPSGMDPDLARRMAGLRGLAEPEEIAAL FSFLASADARSVTGAVYTVDNGLTIS
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=33.8461538461538, Blast_Score=104, Evalue=7e-23, Organism=Homo sapiens, GI19923817, Length=269, Percent_Identity=27.5092936802974, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI66933014, Length=273, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI32483357, Length=262, Percent_Identity=30.9160305343511, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI31542939, Length=265, Percent_Identity=28.6792452830189, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI4504505, Length=198, Percent_Identity=31.3131313131313, Blast_Score=81, Evalue=8e-16, Organism=Homo sapiens, GI4758504, Length=249, Percent_Identity=32.5301204819277, Blast_Score=81, Evalue=9e-16, Organism=Homo sapiens, GI83715985, Length=234, Percent_Identity=32.9059829059829, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI7705925, Length=269, Percent_Identity=28.6245353159851, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI5031737, Length=255, Percent_Identity=27.4509803921569, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI7706318, Length=200, Percent_Identity=27, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI10190704, Length=274, Percent_Identity=29.5620437956204, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI126723750, Length=266, Percent_Identity=28.1954887218045, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI210032110, Length=211, Percent_Identity=25.5924170616114, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI40254992, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI59889578, Length=192, Percent_Identity=29.6875, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI40254986, Length=203, Percent_Identity=29.5566502463054, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI224922801, Length=184, Percent_Identity=29.3478260869565, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI25282469, Length=236, Percent_Identity=27.9661016949153, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI87082100, Length=271, Percent_Identity=31.7343173431734, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1789208, Length=264, Percent_Identity=31.0606060606061, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1790717, Length=270, Percent_Identity=29.6296296296296, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787335, Length=263, Percent_Identity=31.1787072243346, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789378, Length=265, Percent_Identity=27.9245283018868, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1786812, Length=273, Percent_Identity=28.9377289377289, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788459, Length=266, Percent_Identity=27.8195488721804, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI87082160, Length=265, Percent_Identity=27.5471698113208, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787905, Length=263, Percent_Identity=27.7566539923954, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI2367365, Length=261, Percent_Identity=28.735632183908, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787820, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI2367175, Length=253, Percent_Identity=30.8300395256917, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1787526, Length=266, Percent_Identity=27.8195488721804, Blast_Score=69, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562906, Length=274, Percent_Identity=29.9270072992701, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17562908, Length=278, Percent_Identity=29.4964028776978, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17559104, Length=273, Percent_Identity=30.4029304029304, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17562910, Length=282, Percent_Identity=29.0780141843972, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI193204405, Length=253, Percent_Identity=29.2490118577075, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17560150, Length=275, Percent_Identity=29.8181818181818, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17562990, Length=272, Percent_Identity=29.7794117647059, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17560220, Length=253, Percent_Identity=30.4347826086957, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17563726, Length=251, Percent_Identity=28.2868525896414, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17531453, Length=255, Percent_Identity=30.9803921568627, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17560332, Length=275, Percent_Identity=29.8181818181818, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI71994604, Length=258, Percent_Identity=31.7829457364341, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17562904, Length=253, Percent_Identity=27.2727272727273, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI72000259, Length=279, Percent_Identity=29.0322580645161, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17536651, Length=271, Percent_Identity=30.2583025830258, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994600, Length=260, Percent_Identity=30.3846153846154, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=27.6119402985075, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17561402, Length=267, Percent_Identity=30.7116104868914, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538486, Length=256, Percent_Identity=27.734375, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=27.9245283018868, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17544670, Length=231, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17536025, Length=268, Percent_Identity=28.7313432835821, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI25147288, Length=269, Percent_Identity=27.8810408921933, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17565030, Length=287, Percent_Identity=27.5261324041812, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17560676, Length=272, Percent_Identity=27.5735294117647, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17555706, Length=268, Percent_Identity=31.7164179104478, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193203115, Length=236, Percent_Identity=31.3559322033898, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI193203117, Length=236, Percent_Identity=31.3559322033898, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17568967, Length=202, Percent_Identity=28.2178217821782, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17564282, Length=214, Percent_Identity=30.8411214953271, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17508895, Length=205, Percent_Identity=28.2926829268293, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115534694, Length=266, Percent_Identity=27.4436090225564, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17538182, Length=253, Percent_Identity=27.6679841897233, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71982365, Length=204, Percent_Identity=26.9607843137255, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17561272, Length=273, Percent_Identity=28.9377289377289, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=262, Percent_Identity=29.0076335877863, Blast_Score=89, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6324126, Length=274, Percent_Identity=26.6423357664234, Blast_Score=73, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6323882, Length=196, Percent_Identity=30.1020408163265, Blast_Score=73, Evalue=5e-14, Organism=Drosophila melanogaster, GI24644339, Length=266, Percent_Identity=35.7142857142857, Blast_Score=121, Evalue=5e-28, Organism=Drosophila melanogaster, GI28571526, Length=262, Percent_Identity=31.2977099236641, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI21357041, Length=266, Percent_Identity=31.203007518797, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24639444, Length=266, Percent_Identity=33.0827067669173, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI23397609, Length=263, Percent_Identity=30.0380228136882, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24644337, Length=175, Percent_Identity=37.1428571428571, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI24643142, Length=262, Percent_Identity=28.2442748091603, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI281364892, Length=240, Percent_Identity=28.3333333333333, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24649181, Length=205, Percent_Identity=28.2926829268293, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI18859837, Length=198, Percent_Identity=27.7777777777778, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355319, Length=266, Percent_Identity=28.1954887218045, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI17737361, Length=251, Percent_Identity=29.0836653386454, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357673, Length=208, Percent_Identity=26.4423076923077, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24580925, Length=207, Percent_Identity=29.4685990338164, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21355631, Length=228, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221331218, Length=225, Percent_Identity=25.7777777777778, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24665243, Length=225, Percent_Identity=25.7777777777778, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27260; Mature: 27129
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLFEGKTALITGAGSGMGRAITLRLVGQGASVLALDIDADRLVETKALAAKALETEAL CCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH ATEALETARVAGTVSVRQADVSDPGACAEAVAACVAEFGKLDVLGNVAGIYLAEHTTKVT HHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCHHEEEEECCCCEEH VEQYRRVMGVNLDACFFLAQAAIPHLLETGGNIVNIASNAGLQGVPYSAAYSMSKGGVVA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCCEE LTRSLAVEFLKTPLRVNAIAPAGTNTNIATSGSFPSGMDPDLARRMAGLRGLAEPEEIAA HHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHH LFSFLASADARSVTGAVYTVDNGLTIS HHHHHHCCCCCCCCEEEEEECCCEEEC >Mature Secondary Structure TGLFEGKTALITGAGSGMGRAITLRLVGQGASVLALDIDADRLVETKALAAKALETEAL CCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH ATEALETARVAGTVSVRQADVSDPGACAEAVAACVAEFGKLDVLGNVAGIYLAEHTTKVT HHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCHHEEEEECCCCEEH VEQYRRVMGVNLDACFFLAQAAIPHLLETGGNIVNIASNAGLQGVPYSAAYSMSKGGVVA HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCCEE LTRSLAVEFLKTPLRVNAIAPAGTNTNIATSGSFPSGMDPDLARRMAGLRGLAEPEEIAA HHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHH LFSFLASADARSVTGAVYTVDNGLTIS HHHHHHCCCCCCCCEEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]