| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is fabG [H]
Identifier: 158318658
GI number: 158318658
Start: 8436946
End: 8437731
Strand: Reverse
Name: fabG [H]
Synonym: Franean1_6926
Alternate gene names: 158318658
Gene position: 8437731-8436946 (Counterclockwise)
Preceding gene: 158318659
Following gene: 158318657
Centisome position: 93.94
GC content: 70.74
Gene sequence:
>786_bases GTGGCAGACGACGCGATAAAGACACCTGACCAGCTCTTCGACCTCACCGGACGGGTCGCCGTCGTGACCGGCGGCAGCCG GGGGATCGGCCGCGCGGTGGCCGGGGGGCTCGCCGCGGCCGGCGCCGACATCGTCATCGCCAGCCGCAAGATCGAGGCCT GCCAGGCCGCGGCCGCCGAGATTGAGGCCGAGACCGGTCGGCGGGCGCTTCCCGTCGCCTGCCACGTCGGCCGGTGGGAC GACTGCGACCGCCTCGCCGACGCGGTCTACGACAAGTTCGGCCGCTGCGACGTCCTGGTGAACAACGCCGGGATGTCCCC CGTCTACGACACCCTCACCTCGGTGACCCAGGAGCTCTACGACAAGGTCCACGCGGTGAACGCGGGCGGCCCGTTCCGGC TGAGCGCCCTCGTGGGATCGAGGATGGCGGCCGGCGACGGCGGGTCGATCATCAACGTGACGACGGCGGGTTCGTTGCGC CCCAACGCGAGCGATCTCCCCTACGCCATGGCGAAGGCGGCCCTCAACGCCCTGACTCTCGGGCTGGCCGGCGCGTGGTC GCCCAAGGTGCGCGCGAACCTGGTGCTTCCCGGCGCGTTCGACACCGACATAACCAAGGCCTGGGGCCCGGACGCGAAGC GCCTGGCCGGCGAGATGAATCCGATGAAGCGGATTGGGGCACCCGGAGACATGGTCGGCGTCTGCGTCTTCCTGGCGAGC GCTGCGGCCAGCTATGTGAACGGCGCACAGATCCTCGTCGACGGCGGCCTCTTCCGGACTCTCTGA
Upstream 100 bases:
>100_bases ACCGGCGTGCGCGGCGGCACGGTCCGCGCTGGCTCACCGTCGACCTCGTCCACGGGGGTGACCCGCTCCATGTGAGCGGC CGATCGGCGAGACTCGCACG
Downstream 100 bases:
>100_bases CCGTGCGTTCCGGCCCGGCACCCGTCGGGCCGGAACGCTGGAGCGGTAGCAGGGCGTCCTCTATCGCGTGGGTCTTCACG GCGATCACGGTGGACGGAAA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MADDAIKTPDQLFDLTGRVAVVTGGSRGIGRAVAGGLAAAGADIVIASRKIEACQAAAAEIEAETGRRALPVACHVGRWD DCDRLADAVYDKFGRCDVLVNNAGMSPVYDTLTSVTQELYDKVHAVNAGGPFRLSALVGSRMAAGDGGSIINVTTAGSLR PNASDLPYAMAKAALNALTLGLAGAWSPKVRANLVLPGAFDTDITKAWGPDAKRLAGEMNPMKRIGAPGDMVGVCVFLAS AAASYVNGAQILVDGGLFRTL
Sequences:
>Translated_261_residues MADDAIKTPDQLFDLTGRVAVVTGGSRGIGRAVAGGLAAAGADIVIASRKIEACQAAAAEIEAETGRRALPVACHVGRWD DCDRLADAVYDKFGRCDVLVNNAGMSPVYDTLTSVTQELYDKVHAVNAGGPFRLSALVGSRMAAGDGGSIINVTTAGSLR PNASDLPYAMAKAALNALTLGLAGAWSPKVRANLVLPGAFDTDITKAWGPDAKRLAGEMNPMKRIGAPGDMVGVCVFLAS AAASYVNGAQILVDGGLFRTL >Mature_260_residues ADDAIKTPDQLFDLTGRVAVVTGGSRGIGRAVAGGLAAAGADIVIASRKIEACQAAAAEIEAETGRRALPVACHVGRWDD CDRLADAVYDKFGRCDVLVNNAGMSPVYDTLTSVTQELYDKVHAVNAGGPFRLSALVGSRMAAGDGGSIINVTTAGSLRP NASDLPYAMAKAALNALTLGLAGAWSPKVRANLVLPGAFDTDITKAWGPDAKRLAGEMNPMKRIGAPGDMVGVCVFLASA AASYVNGAQILVDGGLFRTL
Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=33.469387755102, Blast_Score=135, Evalue=3e-32, Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=32.9457364341085, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=35.2459016393443, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=30.6451612903226, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI10190704, Length=261, Percent_Identity=31.4176245210728, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=35.2331606217617, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI126723191, Length=180, Percent_Identity=34.4444444444444, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=31.404958677686, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=30.1960784313725, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=30.8300395256917, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI59889578, Length=224, Percent_Identity=29.0178571428571, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI31542939, Length=197, Percent_Identity=30.4568527918782, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4503301, Length=252, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI209862901, Length=200, Percent_Identity=30.5, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI19923983, Length=200, Percent_Identity=30.5, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI4557649, Length=203, Percent_Identity=27.5862068965517, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI40254986, Length=195, Percent_Identity=31.2820512820513, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI224922801, Length=166, Percent_Identity=30.7228915662651, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI4504505, Length=195, Percent_Identity=29.2307692307692, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=31.7460317460317, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=36, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI1787905, Length=256, Percent_Identity=31.25, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=30.3643724696356, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87082160, Length=261, Percent_Identity=31.8007662835249, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789378, Length=237, Percent_Identity=31.2236286919831, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=32.0987654320988, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI2367365, Length=248, Percent_Identity=32.258064516129, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=30.2040816326531, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=30.9803921568627, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI87082100, Length=265, Percent_Identity=29.0566037735849, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787526, Length=226, Percent_Identity=24.7787610619469, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=30.5882352941176, Blast_Score=127, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=32.1138211382114, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17536651, Length=277, Percent_Identity=31.0469314079422, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17536025, Length=277, Percent_Identity=30.6859205776173, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17555706, Length=245, Percent_Identity=31.8367346938775, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI115534694, Length=249, Percent_Identity=30.5220883534137, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=34.9593495934959, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=32.9501915708812, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=31.2, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=31.5589353612167, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=30.2788844621514, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17559104, Length=256, Percent_Identity=31.25, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=30.2681992337165, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17565030, Length=261, Percent_Identity=32.183908045977, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=29.3436293436293, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=30.2681992337165, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=31.1787072243346, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=30.7984790874525, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561272, Length=255, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71982365, Length=183, Percent_Identity=30.0546448087432, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=31.0344827586207, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17560220, Length=260, Percent_Identity=31.1538461538462, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=29.8449612403101, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=29.9610894941634, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=30.5343511450382, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=31.2977099236641, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17508651, Length=247, Percent_Identity=28.7449392712551, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=27.9693486590038, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17544670, Length=263, Percent_Identity=28.8973384030418, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17538182, Length=255, Percent_Identity=28.2352941176471, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=29.8850574712644, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17558628, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17555612, Length=212, Percent_Identity=27.3584905660377, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=27.0916334661355, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355319, Length=248, Percent_Identity=32.258064516129, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI28571526, Length=246, Percent_Identity=33.739837398374, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI21357041, Length=246, Percent_Identity=32.520325203252, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=33.0677290836653, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=30.2788844621514, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=30.3643724696356, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=32.258064516129, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24644337, Length=252, Percent_Identity=31.3492063492063, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI17737361, Length=252, Percent_Identity=29.7619047619048, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI21357673, Length=181, Percent_Identity=29.8342541436464, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24580925, Length=202, Percent_Identity=29.7029702970297, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24641232, Length=212, Percent_Identity=31.1320754716981, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26789; Mature: 26658
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDAIKTPDQLFDLTGRVAVVTGGSRGIGRAVAGGLAAAGADIVIASRKIEACQAAAAE CCCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHH IEAETGRRALPVACHVGRWDDCDRLADAVYDKFGRCDVLVNNAGMSPVYDTLTSVTQELY HHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH DKVHAVNAGGPFRLSALVGSRMAAGDGGSIINVTTAGSLRPNASDLPYAMAKAALNALTL HHHHCCCCCCCEEHHHHHCCHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH GLAGAWSPKVRANLVLPGAFDTDITKAWGPDAKRLAGEMNPMKRIGAPGDMVGVCVFLAS HHCCCCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHHHH AAASYVNGAQILVDGGLFRTL HHHHHCCCCEEEEECCHHHCC >Mature Secondary Structure ADDAIKTPDQLFDLTGRVAVVTGGSRGIGRAVAGGLAAAGADIVIASRKIEACQAAAAE CCCCCCCHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHH IEAETGRRALPVACHVGRWDDCDRLADAVYDKFGRCDVLVNNAGMSPVYDTLTSVTQELY HHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHH DKVHAVNAGGPFRLSALVGSRMAAGDGGSIINVTTAGSLRPNASDLPYAMAKAALNALTL HHHHCCCCCCCEEHHHHHCCHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH GLAGAWSPKVRANLVLPGAFDTDITKAWGPDAKRLAGEMNPMKRIGAPGDMVGVCVFLAS HHCCCCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHHHH AAASYVNGAQILVDGGLFRTL HHHHHCCCCEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]