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The map label for this gene is bbsG [H]

Identifier: 158318653

GI number: 158318653

Start: 8429644

End: 8430960

Strand: Reverse

Name: bbsG [H]

Synonym: Franean1_6921

Alternate gene names: 158318653

Gene position: 8430960-8429644 (Counterclockwise)

Preceding gene: 158318655

Following gene: 158318651

Centisome position: 93.86

GC content: 69.7

Gene sequence:

>1317_bases
GTGTGGGAGTTCGAGACCGACCCGGCCTACCAGGAGCAGCTCGACTGGGTCGACACCTTCGTCCGGGACGTCGTCGAGCC
GCTGGACTTCGTCCTCGACAACCCGTTCGACAAGCGGGACTCCCGGGCGCAGGCGATCGTCCGGCCGCTCAAGGAGGAGG
TGAAGGCACGCGGCCTGTGGGCCTGCCATCTCGGGCCCGAACTGGGCGGTCAGGGCTACGGCCAGGTGCGGCTCGCCCTT
CTCAACGAGATCCTGGGCCGCTCCCGGTGGGCGCCGTCGATCTTCGGCTGCCAGGCCCCCGACTCCGGGAACGCCGAGAT
CCTGGCCCACTTCGGTACGCCGGAGCAGAAGGCCAGGTATCTGGAGCCGCTGCTCGAGGGCGACATCGCGTCCTGCTACT
CGATGACCGAGCCGCGCGGCGGTGCCGACCCGACCCTGTTCACCGTCCGCGCCGTGCGCGACGGCGGCGACTGGGTGATC
AACGGTGAGAAATGGTTCTCGACGAACGCCCGGCACGCCAGCTTCTTCATCGTCATGGCCGTCTCGAACCCCGACGTGGA
CGCCTACAAGGGCATGTCGATGTTCATCGTGCCGGCCGAGACGCCCGGGATCACGATCGTGCGCAACCCCGGCGTCGCCA
CCGAGCCCCCGGAACAGGGCTCGTTGGGGGGCGTCCGGCATGACCACGGCTATGTCCGCTACACCGACGTCCGGGTGCCG
GCCGATCACCTGCTCGGCGGGGAGGGCGACGCGTTCGCGATCGCGCAGACCCGCCTGGGCGGCGGGCGGGTGCACCACGC
GATGCGGACGGTGGCCCTGGCCCGCCACGCCTTCGACCTGCTCTGCGAGCGGGCCGTCTCCCGCCAGACCCGGACGGGGC
CGCTCGCGTCGCTGCAGATGACTCAGGAGAAGGTCGCTGACAGCTGGATTGACATCGAGTGCTTCCGGCTGCTGGTGCTG
CGCACCGCCTGGCTCATCGACAAGCACAAGGACTACCGGAAGGTCCGCAAGGACATCTCCGCGGTCAAGGTGATGCTGCC
CCGCGTCCTGCACGACGTCGCCCAGCGGGCCCTGCGCATCCACGGGTCGCTCGGGGTGTCCAACGAGATGCCGTTCGTGA
GCATGATGGTGACCGCGGAGGCGCTCGGCATCGCCGACGGCCCCACTGAGGTCCACAAGGTCACGCTGGCGCGTCAGGTG
CTCCGGCAGTACACCCCGGTCGAGACGCTCTTCCCGTCCGGTCACCTGCCCACCCTGCGGGAACAGGCCTTCGCCGCCTT
CGCCGACCGCCTCGAACACGAGGCCGCCGAGCTGTGA

Upstream 100 bases:

>100_bases
GATCGTCGCTTCACGGAGTCCGGCCGTCACGGAGTCCGGCCGTCATCGATGCCGACCCGCGCCGCGCGGGTGCGGCCCTG
GAACGAGAGCGAGACCGACT

Downstream 100 bases:

>100_bases
CGACGCGCCTGACCGAGCGGCGACGGCACCTGGTGGGCCACGCCGCTCGGCAGGCTAGGCCCTCCGAGTGAAGGACAGGC
CCTGCCGGACGCGTGCCTCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MWEFETDPAYQEQLDWVDTFVRDVVEPLDFVLDNPFDKRDSRAQAIVRPLKEEVKARGLWACHLGPELGGQGYGQVRLAL
LNEILGRSRWAPSIFGCQAPDSGNAEILAHFGTPEQKARYLEPLLEGDIASCYSMTEPRGGADPTLFTVRAVRDGGDWVI
NGEKWFSTNARHASFFIVMAVSNPDVDAYKGMSMFIVPAETPGITIVRNPGVATEPPEQGSLGGVRHDHGYVRYTDVRVP
ADHLLGGEGDAFAIAQTRLGGGRVHHAMRTVALARHAFDLLCERAVSRQTRTGPLASLQMTQEKVADSWIDIECFRLLVL
RTAWLIDKHKDYRKVRKDISAVKVMLPRVLHDVAQRALRIHGSLGVSNEMPFVSMMVTAEALGIADGPTEVHKVTLARQV
LRQYTPVETLFPSGHLPTLREQAFAAFADRLEHEAAEL

Sequences:

>Translated_438_residues
MWEFETDPAYQEQLDWVDTFVRDVVEPLDFVLDNPFDKRDSRAQAIVRPLKEEVKARGLWACHLGPELGGQGYGQVRLAL
LNEILGRSRWAPSIFGCQAPDSGNAEILAHFGTPEQKARYLEPLLEGDIASCYSMTEPRGGADPTLFTVRAVRDGGDWVI
NGEKWFSTNARHASFFIVMAVSNPDVDAYKGMSMFIVPAETPGITIVRNPGVATEPPEQGSLGGVRHDHGYVRYTDVRVP
ADHLLGGEGDAFAIAQTRLGGGRVHHAMRTVALARHAFDLLCERAVSRQTRTGPLASLQMTQEKVADSWIDIECFRLLVL
RTAWLIDKHKDYRKVRKDISAVKVMLPRVLHDVAQRALRIHGSLGVSNEMPFVSMMVTAEALGIADGPTEVHKVTLARQV
LRQYTPVETLFPSGHLPTLREQAFAAFADRLEHEAAEL
>Mature_438_residues
MWEFETDPAYQEQLDWVDTFVRDVVEPLDFVLDNPFDKRDSRAQAIVRPLKEEVKARGLWACHLGPELGGQGYGQVRLAL
LNEILGRSRWAPSIFGCQAPDSGNAEILAHFGTPEQKARYLEPLLEGDIASCYSMTEPRGGADPTLFTVRAVRDGGDWVI
NGEKWFSTNARHASFFIVMAVSNPDVDAYKGMSMFIVPAETPGITIVRNPGVATEPPEQGSLGGVRHDHGYVRYTDVRVP
ADHLLGGEGDAFAIAQTRLGGGRVHHAMRTVALARHAFDLLCERAVSRQTRTGPLASLQMTQEKVADSWIDIECFRLLVL
RTAWLIDKHKDYRKVRKDISAVKVMLPRVLHDVAQRALRIHGSLGVSNEMPFVSMMVTAEALGIADGPTEVHKVTLARQV
LRQYTPVETLFPSGHLPTLREQAFAAFADRLEHEAAEL

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI38505218, Length=401, Percent_Identity=36.4089775561097, Blast_Score=239, Evalue=5e-63,
Organism=Homo sapiens, GI48976061, Length=366, Percent_Identity=36.8852459016393, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI211971008, Length=366, Percent_Identity=36.8852459016393, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI4557233, Length=384, Percent_Identity=29.1666666666667, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI4557231, Length=354, Percent_Identity=28.5310734463277, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI187960098, Length=354, Percent_Identity=28.5310734463277, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI4501859, Length=388, Percent_Identity=25.7731958762887, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI21361497, Length=416, Percent_Identity=24.7596153846154, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI7656849, Length=350, Percent_Identity=23.7142857142857, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI4501857, Length=368, Percent_Identity=24.1847826086957, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI226958412, Length=334, Percent_Identity=23.9520958083832, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI226958414, Length=334, Percent_Identity=23.9520958083832, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI76496475, Length=389, Percent_Identity=24.6786632390745, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI4557235, Length=389, Percent_Identity=24.6786632390745, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI4503943, Length=417, Percent_Identity=24.9400479616307, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI7669494, Length=399, Percent_Identity=25.062656641604, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=298, Percent_Identity=28.5234899328859, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1786223, Length=341, Percent_Identity=24.0469208211144, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562446, Length=361, Percent_Identity=37.9501385041551, Blast_Score=234, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17534899, Length=406, Percent_Identity=28.5714285714286, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17569725, Length=406, Percent_Identity=27.3399014778325, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17570075, Length=287, Percent_Identity=26.4808362369338, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17506239, Length=391, Percent_Identity=26.0869565217391, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17508101, Length=389, Percent_Identity=25.4498714652956, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=360, Percent_Identity=23.3333333333333, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=380, Percent_Identity=23.9473684210526, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=219, Percent_Identity=27.8538812785388, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=290, Percent_Identity=26.2068965517241, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=267, Percent_Identity=27.3408239700375, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17533517, Length=271, Percent_Identity=24.7232472324723, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17534353, Length=300, Percent_Identity=26.6666666666667, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=300, Percent_Identity=25.3333333333333, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=298, Percent_Identity=25.1677852348993, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=218, Percent_Identity=28.4403669724771, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21356377, Length=369, Percent_Identity=27.9132791327913, Blast_Score=141, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24660351, Length=291, Percent_Identity=31.9587628865979, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24646207, Length=347, Percent_Identity=27.9538904899135, Blast_Score=129, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24666513, Length=395, Percent_Identity=26.8354430379747, Blast_Score=126, Evalue=4e-29,
Organism=Drosophila melanogaster, GI21355753, Length=403, Percent_Identity=25.5583126550869, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281363737, Length=260, Percent_Identity=28.0769230769231, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI19920834, Length=394, Percent_Identity=24.6192893401015, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 48638; Mature: 48638

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWEFETDPAYQEQLDWVDTFVRDVVEPLDFVLDNPFDKRDSRAQAIVRPLKEEVKARGLW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEE
ACHLGPELGGQGYGQVRLALLNEILGRSRWAPSIFGCQAPDSGNAEILAHFGTPEQKARY
EEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHH
LEPLLEGDIASCYSMTEPRGGADPTLFTVRAVRDGGDWVINGEKWFSTNARHASFFIVMA
HHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEECCCCEECCCCCCEEEEEEEE
VSNPDVDAYKGMSMFIVPAETPGITIVRNPGVATEPPEQGSLGGVRHDHGYVRYTDVRVP
ECCCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEEECC
ADHLLGGEGDAFAIAQTRLGGGRVHHAMRTVALARHAFDLLCERAVSRQTRTGPLASLQM
HHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
TQEKVADSWIDIECFRLLVLRTAWLIDKHKDYRKVRKDISAVKVMLPRVLHDVAQRALRI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGSLGVSNEMPFVSMMVTAEALGIADGPTEVHKVTLARQVLRQYTPVETLFPSGHLPTLR
HCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHH
EQAFAAFADRLEHEAAEL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWEFETDPAYQEQLDWVDTFVRDVVEPLDFVLDNPFDKRDSRAQAIVRPLKEEVKARGLW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEE
ACHLGPELGGQGYGQVRLALLNEILGRSRWAPSIFGCQAPDSGNAEILAHFGTPEQKARY
EEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHH
LEPLLEGDIASCYSMTEPRGGADPTLFTVRAVRDGGDWVINGEKWFSTNARHASFFIVMA
HHHHHCCCHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEECCCCEECCCCCCEEEEEEEE
VSNPDVDAYKGMSMFIVPAETPGITIVRNPGVATEPPEQGSLGGVRHDHGYVRYTDVRVP
ECCCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEEECC
ADHLLGGEGDAFAIAQTRLGGGRVHHAMRTVALARHAFDLLCERAVSRQTRTGPLASLQM
HHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
TQEKVADSWIDIECFRLLVLRTAWLIDKHKDYRKVRKDISAVKVMLPRVLHDVAQRALRI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HGSLGVSNEMPFVSMMVTAEALGIADGPTEVHKVTLARQVLRQYTPVETLFPSGHLPTLR
HCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHH
EQAFAAFADRLEHEAAEL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]