| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318655
Identifier: 158318655
GI number: 158318655
Start: 8432516
End: 8433373
Strand: Reverse
Name: 158318655
Synonym: Franean1_6923
Alternate gene names: NA
Gene position: 8433373-8432516 (Counterclockwise)
Preceding gene: 158318656
Following gene: 158318653
Centisome position: 93.89
GC content: 72.84
Gene sequence:
>858_bases ATGGACGCCGCCGAACGCGAACTCCTCACCGAGACCTTCCGCAAGGCCATGACCGGCACCACCGGCGCCGCCCTCGACAC CGCCCTCACCGACCTCGGCTGGCCCGAACTCCTCACCGAGGAACCCGACACCGCCATCCCCGTCGTGTTCACCCTCCTCG GCGAAACCGGCGCACACGCCCCCATCCTCAACGACGTCCTCCTGCACGCCACCGGACAACCCCTCGGCGGCACCCTCCCC CTGCCCTACACCGGCGGCACCTGGCTCACCTGGGAACGCACCGGCCTCAGTCAGCCCGGCAGCGTGATCGACCCCGCGCT CCCGCTACACACCACCAGCACCGGCGACCCGAACCTGCCCCTCGCCGCCGGACAACGAGCCCTGGGCTGGTGGCTCCTGG GCACCGGCCGCACCATGCTCGCCCTCACCCGCGAACACGCCCTCGCCCGCACCCAGTTCGGCCGGCCCATCGCCTCCTTC CAGGCCGTCCGCCACCGCCTCGCCGAAACCCTCGTCGCCCTCGACGGCGCCGAAGCCACCCTCCACACCGCCACCACCAC CGCGGCAACCACGGGCACCGACGCGGGCGCAACCACGGGAACGGGCACCACCACCGGCGACATCACGCTCACCGCCCTGC TCGCCAAGGCCGCCGCCGGCAAAGCCGCCCTCGACGCCGCCCGCCACTGCCAACAGGTCCTCGCCGGCATCGGCTTCACC GCCGAACACGACTTCCACCACCACCTCCGCCGCACCCTCACCCTCGACGGCCTCCTCGGCAGCACCCGCGACCTCACCCG CCAGGCCGGCGCCCACATCCGCCAGAACAACCACGCCCCACGCCTGGTCAACCTCTGA
Upstream 100 bases:
>100_bases AGTACCTCTACTCCCGCGCCGCCACCATCTACGGCGGAACCGCCGAGATCCAGCGGAACATCATCGCCCGCCGACTCCTC GACCTCGGCAAGGAATAACC
Downstream 100 bases:
>100_bases CGCTGACCTGAGAACCGAAGTCGGAGCCCGAGACCCGAGACCCGAGACCGGAATCCGGAAGGAGCGAGGAGCGAGGAGCC AGGAGCGGCCAGGACCCGGT
Product: acyl-CoA dehydrogenase domain-containing protein
Products: NA
Alternate protein names: Acyl-CoA Dehydrogenase
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MDAAERELLTETFRKAMTGTTGAALDTALTDLGWPELLTEEPDTAIPVVFTLLGETGAHAPILNDVLLHATGQPLGGTLP LPYTGGTWLTWERTGLSQPGSVIDPALPLHTTSTGDPNLPLAAGQRALGWWLLGTGRTMLALTREHALARTQFGRPIASF QAVRHRLAETLVALDGAEATLHTATTTAATTGTDAGATTGTGTTTGDITLTALLAKAAAGKAALDAARHCQQVLAGIGFT AEHDFHHHLRRTLTLDGLLGSTRDLTRQAGAHIRQNNHAPRLVNL
Sequences:
>Translated_285_residues MDAAERELLTETFRKAMTGTTGAALDTALTDLGWPELLTEEPDTAIPVVFTLLGETGAHAPILNDVLLHATGQPLGGTLP LPYTGGTWLTWERTGLSQPGSVIDPALPLHTTSTGDPNLPLAAGQRALGWWLLGTGRTMLALTREHALARTQFGRPIASF QAVRHRLAETLVALDGAEATLHTATTTAATTGTDAGATTGTGTTTGDITLTALLAKAAAGKAALDAARHCQQVLAGIGFT AEHDFHHHLRRTLTLDGLLGSTRDLTRQAGAHIRQNNHAPRLVNL >Mature_285_residues MDAAERELLTETFRKAMTGTTGAALDTALTDLGWPELLTEEPDTAIPVVFTLLGETGAHAPILNDVLLHATGQPLGGTLP LPYTGGTWLTWERTGLSQPGSVIDPALPLHTTSTGDPNLPLAAGQRALGWWLLGTGRTMLALTREHALARTQFGRPIASF QAVRHRLAETLVALDGAEATLHTATTTAATTGTDAGATTGTGTTTGDITLTALLAKAAAGKAALDAARHCQQVLAGIGFT AEHDFHHHLRRTLTLDGLLGSTRDLTRQAGAHIRQNNHAPRLVNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29906; Mature: 29906
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAERELLTETFRKAMTGTTGAALDTALTDLGWPELLTEEPDTAIPVVFTLLGETGAHA CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCC PILNDVLLHATGQPLGGTLPLPYTGGTWLTWERTGLSQPGSVIDPALPLHTTSTGDPNLP HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCC LAAGQRALGWWLLGTGRTMLALTREHALARTQFGRPIASFQAVRHRLAETLVALDGAEAT HHCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCE LHTATTTAATTGTDAGATTGTGTTTGDITLTALLAKAAAGKAALDAARHCQQVLAGIGFT EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC AEHDFHHHLRRTLTLDGLLGSTRDLTRQAGAHIRQNNHAPRLVNL CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDAAERELLTETFRKAMTGTTGAALDTALTDLGWPELLTEEPDTAIPVVFTLLGETGAHA CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCC PILNDVLLHATGQPLGGTLPLPYTGGTWLTWERTGLSQPGSVIDPALPLHTTSTGDPNLP HHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCC LAAGQRALGWWLLGTGRTMLALTREHALARTQFGRPIASFQAVRHRLAETLVALDGAEAT HHCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCE LHTATTTAATTGTDAGATTGTGTTTGDITLTALLAKAAAGKAALDAARHCQQVLAGIGFT EEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC AEHDFHHHLRRTLTLDGLLGSTRDLTRQAGAHIRQNNHAPRLVNL CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA