| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318652
Identifier: 158318652
GI number: 158318652
Start: 8428543
End: 8429589
Strand: Direct
Name: 158318652
Synonym: Franean1_6920
Alternate gene names: NA
Gene position: 8428543-8429589 (Clockwise)
Preceding gene: 158318649
Following gene: 158318654
Centisome position: 93.84
GC content: 75.26
Gene sequence:
>1047_bases ATGGATGCCCTCCCGACGGCACCCGAGCCCCTCGGTATCGAGGCCGGGGCGCTTGACCGCTGGTTCGGTGAACATGCGGC GGGCGCGGTGCCGCCGCTGCGCTACGACCGGGTCACCGGCGGCCACTCGTGCCTCACCTACCTCGTCAGCGACGCCGGTC ACCAGCGGTATGTGCTGCGCCGGCCGCCGGTCGGCGCGCTGCTCGCGACCGCCCACGACGTCACCCGCGAGGCGCGGATC CTGGCCGCGCTCGCCGGCTCCGGCGTGCCGGTGCCGCGCGTACTCGGCGTCTGCGACGACCCGGAGGTGACCGGCGCGCC CTTCTACGTGATGGCCTACGTGGACGGGCTCGTGCTGCGCACCGCGGCCGACTCCGAGGCCCTCCTCCCCTCCCCGCAGG CCCGCCGCCGCGCCGGGTACGCGCTCGTCGACACCCTCGCCGCACTGCACGCCGTCGACGTCGACACGGTCGGCCTCGGC GCCCTGTCCCGGCGGGACGGCTTTCTCGACCGGCAGCTCAGGCGCTGGTCGGCGCAGTGGGCGGCCTGCGAGCTCGGGGA CATGGGCGGCATGGCCGCGCTGCACGACTGGCTCGTCGCCCACCGGCCCGCCGAGTCCACGGCGCGCCTCGTGCACGGCG ACTTCCGGCTCGGCAACGCGCTCCTCGGCCCCGACGGGGACGTCCTGGCCCTGCTGGACTGGGAGCTGTGCACTCTGGGC GACCCGCTCGCCGACGTCGCCTACCTGCTGCGCACCTGGTCGACGCCGGACGCGCGGGCGAGCCAGGAGCGGCTGCCGTC CGCGCTGCCAGGGTTCCCCACGACGGACGAGCTGGCCGCCCGCTACGCGCGGCAGTCCGGCCGCTCGATCGCGGAGCTCG ACTACTGGATGGCGTTCACCGCCTGGCGGGCCGCCGCCATCCTGGCCGGCGTGTACCGGCGCTACCTCGACGGGAAGATG GGCACACCGCCCGACGATCTACCCACGTTCGCGACCGAGGTCGAGGCACGCGTCCGGCAGGGCCTGTCCTTCACTCGGAG GGCCTAG
Upstream 100 bases:
>100_bases CGGGAGCGCCACCGTGCAAGGTGACGGTAGGGTCAGATGCTGGGAAATCGTGGCACTCTCGCCACGTCGATCTCCGCACC GAGCCGAAGGCAGGTCGCAG
Downstream 100 bases:
>100_bases CCTGCCGAGCGGCGTGGCCCACCAGGTGCCGTCGCCGCTCGGTCAGGCGCGTCGTCACAGCTCGGCGGCCTCGTGTTCGA GGCGGTCGGCGAAGGCGGCG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase Domain-Containing Protein; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MDALPTAPEPLGIEAGALDRWFGEHAAGAVPPLRYDRVTGGHSCLTYLVSDAGHQRYVLRRPPVGALLATAHDVTREARI LAALAGSGVPVPRVLGVCDDPEVTGAPFYVMAYVDGLVLRTAADSEALLPSPQARRRAGYALVDTLAALHAVDVDTVGLG ALSRRDGFLDRQLRRWSAQWAACELGDMGGMAALHDWLVAHRPAESTARLVHGDFRLGNALLGPDGDVLALLDWELCTLG DPLADVAYLLRTWSTPDARASQERLPSALPGFPTTDELAARYARQSGRSIAELDYWMAFTAWRAAAILAGVYRRYLDGKM GTPPDDLPTFATEVEARVRQGLSFTRRA
Sequences:
>Translated_348_residues MDALPTAPEPLGIEAGALDRWFGEHAAGAVPPLRYDRVTGGHSCLTYLVSDAGHQRYVLRRPPVGALLATAHDVTREARI LAALAGSGVPVPRVLGVCDDPEVTGAPFYVMAYVDGLVLRTAADSEALLPSPQARRRAGYALVDTLAALHAVDVDTVGLG ALSRRDGFLDRQLRRWSAQWAACELGDMGGMAALHDWLVAHRPAESTARLVHGDFRLGNALLGPDGDVLALLDWELCTLG DPLADVAYLLRTWSTPDARASQERLPSALPGFPTTDELAARYARQSGRSIAELDYWMAFTAWRAAAILAGVYRRYLDGKM GTPPDDLPTFATEVEARVRQGLSFTRRA >Mature_348_residues MDALPTAPEPLGIEAGALDRWFGEHAAGAVPPLRYDRVTGGHSCLTYLVSDAGHQRYVLRRPPVGALLATAHDVTREARI LAALAGSGVPVPRVLGVCDDPEVTGAPFYVMAYVDGLVLRTAADSEALLPSPQARRRAGYALVDTLAALHAVDVDTVGLG ALSRRDGFLDRQLRRWSAQWAACELGDMGGMAALHDWLVAHRPAESTARLVHGDFRLGNALLGPDGDVLALLDWELCTLG DPLADVAYLLRTWSTPDARASQERLPSALPGFPTTDELAARYARQSGRSIAELDYWMAFTAWRAAAILAGVYRRYLDGKM GTPPDDLPTFATEVEARVRQGLSFTRRA
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI211971008, Length=319, Percent_Identity=39.1849529780564, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI48976061, Length=319, Percent_Identity=39.1849529780564, Blast_Score=198, Evalue=7e-51, Organism=Homo sapiens, GI38505218, Length=347, Percent_Identity=32.2766570605187, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17562446, Length=289, Percent_Identity=33.9100346020761, Blast_Score=166, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37546; Mature: 37546
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALPTAPEPLGIEAGALDRWFGEHAAGAVPPLRYDRVTGGHSCLTYLVSDAGHQRYVLR CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE RPPVGALLATAHDVTREARILAALAGSGVPVPRVLGVCDDPEVTGAPFYVMAYVDGLVLR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHEE TAADSEALLPSPQARRRAGYALVDTLAALHAVDVDTVGLGALSRRDGFLDRQLRRWSAQW ECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHCCCCHHHHCCHHHHHHHHHHHHH AACELGDMGGMAALHDWLVAHRPAESTARLVHGDFRLGNALLGPDGDVLALLDWELCTLG HHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHCCCEEECCCCCEEEEECCHHHHCC DPLADVAYLLRTWSTPDARASQERLPSALPGFPTTDELAARYARQSGRSIAELDYWMAFT CHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH AWRAAAILAGVYRRYLDGKMGTPPDDLPTFATEVEARVRQGLSFTRRA HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MDALPTAPEPLGIEAGALDRWFGEHAAGAVPPLRYDRVTGGHSCLTYLVSDAGHQRYVLR CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE RPPVGALLATAHDVTREARILAALAGSGVPVPRVLGVCDDPEVTGAPFYVMAYVDGLVLR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHEE TAADSEALLPSPQARRRAGYALVDTLAALHAVDVDTVGLGALSRRDGFLDRQLRRWSAQW ECCCCCCCCCCCHHHHHCCHHHHHHHHHHHHCCCCHHCCCCHHHHCCHHHHHHHHHHHHH AACELGDMGGMAALHDWLVAHRPAESTARLVHGDFRLGNALLGPDGDVLALLDWELCTLG HHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHCCCEEECCCCCEEEEECCHHHHCC DPLADVAYLLRTWSTPDARASQERLPSALPGFPTTDELAARYARQSGRSIAELDYWMAFT CHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH AWRAAAILAGVYRRYLDGKMGTPPDDLPTFATEVEARVRQGLSFTRRA HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA