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The map label for this gene is yfhF [C]

Identifier: 158318602

GI number: 158318602

Start: 8375311

End: 8375931

Strand: Reverse

Name: yfhF [C]

Synonym: Franean1_6870

Alternate gene names: 158318602

Gene position: 8375931-8375311 (Counterclockwise)

Preceding gene: 158318603

Following gene: 158318601

Centisome position: 93.25

GC content: 69.89

Gene sequence:

>621_bases
ATGACCCTCGTCCAGAGCACCATCGAACTGACCGAGCGCGCCCGCGCCCAGGTGCGGACCCTGCTCAGCGGCAGCGTGGA
GACGGCCGGCTTCGGCCTGCGCGTGGGCGTGAACCCGGGTGGCTGTTCCGGCCTCACCTACAACCTGGCGCTCGCCCCCG
GAGCCGAGAGCGACGACATCGTCATCCACTCCGACGGGTTCGACGTCTTCGTCAACTCGTCGATGATGGGGCATCTGAGG
GGGCTGCGGATCGACTATGTCGAGTCGCTGACCTCCTCCGGGTTCACCTTCACCAACCCGAACGCGACCAGCTCGTGCGG
CTGCGGCAACTCGTTCGGCACCCCGGAGGAGCCCGAGCGCGCCGAGGCCGACGACCGGCTGCGCGGCCAGGTCGAGGACG
TCATCGCCGAGATCCGGCCGTTCCTGCAGGGTGACGGCGGCGACGTGCAACTCGTCACCGTGCTCGCGGGCAACGGGGAG
CCGGGCACCGCCGAGGTCCACATCCGGCTTGTCGGCGCCTGCAACGGCTGCTCCAGCGCCTCGGCCACCGTCACCGCGGT
GATCGAGAAGCGCATCAAGGAGAGCCTGCCCGAGATCGGCCGCGTCGCCCTCGTCTCCTGA

Upstream 100 bases:

>100_bases
AGGCGCGCGCCGACGGTGCCCGCCCCGCCCACACCCGTTCCGTCGGCACCGGCTCCCACAGCGCCGGCACCGACGTCACA
GACCTGGAGGTAGCGCGGTC

Downstream 100 bases:

>100_bases
CGGCGAACCCCGGCCCACCACACCGACCCCCCGACGGAACACACGGACCAGTCATGGAGCGCAGCATGATAGTGACCCGG
CGTAGCTCTCCGCCGGCGTC

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MTLVQSTIELTERARAQVRTLLSGSVETAGFGLRVGVNPGGCSGLTYNLALAPGAESDDIVIHSDGFDVFVNSSMMGHLR
GLRIDYVESLTSSGFTFTNPNATSSCGCGNSFGTPEEPERAEADDRLRGQVEDVIAEIRPFLQGDGGDVQLVTVLAGNGE
PGTAEVHIRLVGACNGCSSASATVTAVIEKRIKESLPEIGRVALVS

Sequences:

>Translated_206_residues
MTLVQSTIELTERARAQVRTLLSGSVETAGFGLRVGVNPGGCSGLTYNLALAPGAESDDIVIHSDGFDVFVNSSMMGHLR
GLRIDYVESLTSSGFTFTNPNATSSCGCGNSFGTPEEPERAEADDRLRGQVEDVIAEIRPFLQGDGGDVQLVTVLAGNGE
PGTAEVHIRLVGACNGCSSASATVTAVIEKRIKESLPEIGRVALVS
>Mature_205_residues
TLVQSTIELTERARAQVRTLLSGSVETAGFGLRVGVNPGGCSGLTYNLALAPGAESDDIVIHSDGFDVFVNSSMMGHLRG
LRIDYVESLTSSGFTFTNPNATSSCGCGNSFGTPEEPERAEADDRLRGQVEDVIAEIRPFLQGDGGDVQLVTVLAGNGEP
GTAEVHIRLVGACNGCSSASATVTAVIEKRIKESLPEIGRVALVS

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=109, Percent_Identity=39.4495412844037, Blast_Score=74, Evalue=8e-14,
Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=40.5660377358491, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1786351, Length=105, Percent_Identity=36.1904761904762, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787974, Length=107, Percent_Identity=33.6448598130841, Blast_Score=68, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193209025, Length=111, Percent_Identity=36.036036036036, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI25146411, Length=108, Percent_Identity=36.1111111111111, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71998452, Length=114, Percent_Identity=32.4561403508772, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=38.8888888888889, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 21486; Mature: 21355

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLVQSTIELTERARAQVRTLLSGSVETAGFGLRVGVNPGGCSGLTYNLALAPGAESDDI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCE
VIHSDGFDVFVNSSMMGHLRGLRIDYVESLTSSGFTFTNPNATSSCGCGNSFGTPEEPER
EEECCCCEEEECCHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCC
AEADDRLRGQVEDVIAEIRPFLQGDGGDVQLVTVLAGNGEPGTAEVHIRLVGACNGCSSA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCC
SATVTAVIEKRIKESLPEIGRVALVS
CHHHHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure 
TLVQSTIELTERARAQVRTLLSGSVETAGFGLRVGVNPGGCSGLTYNLALAPGAESDDI
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCE
VIHSDGFDVFVNSSMMGHLRGLRIDYVESLTSSGFTFTNPNATSSCGCGNSFGTPEEPER
EEECCCCEEEECCHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCC
AEADDRLRGQVEDVIAEIRPFLQGDGGDVQLVTVLAGNGEPGTAEVHIRLVGACNGCSSA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCC
SATVTAVIEKRIKESLPEIGRVALVS
CHHHHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7642138 [H]