| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318487
Identifier: 158318487
GI number: 158318487
Start: 8215996
End: 8218743
Strand: Reverse
Name: 158318487
Synonym: Franean1_6755
Alternate gene names: NA
Gene position: 8218743-8215996 (Counterclockwise)
Preceding gene: 158318488
Following gene: 158318486
Centisome position: 91.5
GC content: 72.31
Gene sequence:
>2748_bases ATGTATCAAGCTGCCCACGCGGCGTTGATCAGGGCTGCTTCCTACCCCCGAGATCTGACGCTGCCCACGTGGCCCGATCT GACCGCGAACCAGGCCGACGAGTGGCTGGAGTGGCTGCGGGAGGTATGGGCGTTGCCGGAGTTCGCGGCGGCTGTCGGGC AGGCAGCCCCTGACCTGGCCGATCAGATCACCCACGTGCTTGCCCAGGAGTCGATGCCAGCGCGCAGGGTGCGGCGTCTG GTGGAGACGACCGTGCGGTATCTGCTGCGGTGGACGACCCGGCCCACGCCGTTCGGCAGGTTCGCCGGGGTGGCTCCCCT CGCGTTCGGCCCCCGCGCGGCGGTCTGGTGGGGCGACCAGCATCACGAGGTGGTCCGACTGGACGACCGCTCCGTCGCCG AATACACGGCGGTGACGGAGCGGGACCTGGCGGTGCTGCGCGGGGTCACGGTCATGACGAACACGCTGGGGTATCGGCGT GGCGGGGTGTGGGTGCTGCCCTGCGCCCGCGTCGAAGGTGACCGGGTGTGGGATGTCGAGATCAACCTGACTGCCCCGGT GCTGGTGGCGGTGGAGAAGGCCCGTGCCCCGATCCCGTTCCGGGAGCTGGCCGCGACGGTCGCCGAGGACCAGGCCATCG GAACCGCGAAGGCGGAGCGACTACTCGGCGCCCTGGTGGGCGCGGGGGTGTTGCTGTCGGCGGTCCGGCCGCCGATGACC GTGACCGACCCGGCCGCGCACCTGGCCCGCCACATCGCTCTCCCCAACCCAGGCGAACGGAGCGCGGTCGATCTGCGGGT TGACTGCTCGGTGACGCTGCCGCCCGCGGTGGTCCGCGAGGCGCAGGAAGCCGCCGCGGCGCTCGTCGCAGTTGCGCCAC GCCTGCCTGGCTGGGCCGCCTATCATTCCGCGTTCAGTGAGCGGTGGGGGCCGGGCGCGGCTGTGCCGCTGCGGGAGGTC GTGGGCATTCTCGGGTTCCCGGCCGGTTACCGGGGCTCGCTGCGCCGTGATGCGGCGACGTTCACTGCCCGGGATGCTCT GCTCGCGACGCTCGCCCAGCGCTCTGCCCTGGACGGATGCGCCGAAGTCCTCCTGGACGACGATCTAATCGGGCAGCTTC GCAGCGAGGACGACCGGCCGCCGATCCCGCACACCGAACTGCGGTTCACTCTCGCCGCAGGAACGCTTCAGGACCTCGAC CGCGGCGCGTTCACCCTGACGGTCGTCAGTGGAGCCCGCCACGCCGGCGTGGCAGGTGGCCGCTTCCTGCACCTGCTCAC CCCCACCGAGCTGGACCAGTTCCGCAGCATCTACACCAGCCTGCCGACTGCCTTACCCGGCGCGGACGCCGTACAGCTGT CCGGGCCTCCGCTCGACCCCAGGCTGGCCACCGTCGCCCGCACGCCCGAGCTCCTACCGGTGCTGCCCGTCGGCGACCTC CATGCCGACCCGGTGTGCACGGTGGACGACCTGGCGGTGGCCGCCGATGGGCAGCGGCTCTGGTTGGTGTCGCGCCTAAC TGGTCGACCGGTCGAGCCGCTGCTGTTCAACTGCGTGCTCCTGGCTACCCACCAGCAGCCACTCGTTCGGTTCCTCACCG AGATCTGGACGGCCTGGACGGCGCCGTGCGCCCGGTTCGACTGGGGACACGCCCGCACATTGCCGTTCCTCCCGCGGGTC CGCCGGGGCCGTTCGATCCTGCACCCGGCCCGCTGGACCATCCCCGCCGAGGCGTTACCCGCCCGCACCGCGACGTGGCC GCAGTGGCGGGCCGCCTGGCACCAGCACCACGAACGCCGCCAGCTGCCACAGGAGGTGCTGATCGGCGGCGACGACGTAC GGCTACGCCTCGACCTGGACGAGAACGCCCATCTCGCGGTCCTGCGTAGCCACCTCGACCGGCACGGACGCGCTGTCCTC ACCGAGACGGACGGGCCCTCAGGGTGGATCGATGGCAGACCCGCCGAACTCCTGCTCACCCTCACCCGCACCCCACCAGC CCACCGCCTGGCCGCCCGCCGGGCCCGTCCTGTCAGCGTTCCTGCCCACCGGCCCGGCCGGTCGCGCTGGTTGGACGCCC GCCTGGTCGGACAAGCCGATCACGTCCTCGCCCGCCTGTCCGAGTTTCCTGGTCTGCCCGCAGGTTGGTGGTTCCTGCGC TACCCGCACCCCGAACCCCACCTGCGGCTGCGCATCCCGCTGCGGGGCATTGCCCAGTTCGCCGACGTCGCCCGCGGCCT CGCCGGCTGGGCGGAGCAGCTGCACGACGACGGACTGCTGGCCGACTACACCCTGGCCACCTACCGGCCAGAGACCCGCT GGGGCTGCGGGCAGACCCTCGCCGCGGCCGAGGCAGTGTTCGCCGCCGACTCCCGCGCCGCCCTCACCTGGACGTCCGGC GACCGCCAGGCTGGCACCGCAGCAGGGATGATCGCTATCGCCGGCGGGTTCACCGATGACGGAGCGCGTTGGCTCGTCGA GCACGCACCCCACGGCGGCGGGTCACGCCTGGAGCCCGCCCAGATCGCCGGGGCCCGCCTGACCTACGGAGACGAGGCTC TGACCGCGACGCTGGCCACCTACCGGACCCTCGCCGCCCGAGACGGTCTCGACCTGGACCAGGTGCTGGCCGACCTGCTG CACCTGCACCACGCCCGCATGATCGGCCCCGATCTGGCGTCCGAACGGCACTGTCTGCGCCTGGCCCGCGCCCTCGCCCA GACCACCCTGGCCAGGAGGCCATCGTGA
Upstream 100 bases:
>100_bases CCTGCACGACCAAGGCCGACGGCAGCTAAACCCGCTGCCCCAGGAGCGCCCGGCCTACTCCGGCCGGGCGCTCCGCCCCT TCAGTGACGCGGAGCCAGAC
Downstream 100 bases:
>100_bases CGGCAGGACAGTCCCTCGGCGACGGCGCGGCCGGCGTCGCTCTCCTCCATCTGGAGACCGGCAACTGGCCGGCGGCGTAC GCGGCGCTAGAGCAGGCCGT
Product: lantibiotic dehydratase domain-containing protein
Products: NA
Alternate protein names: Lantibiotic Dehydratase Domain Protein; C Terminus Superfamily Lantibiotic Dehydratase; Lantibiotic Dehydratase-Like Protein; Lantibiotic Dehydratase; Lantibiotic Biosynthesis Protein SpaB; Lantibiotic Biosynthesis Protein
Number of amino acids: Translated: 915; Mature: 915
Protein sequence:
>915_residues MYQAAHAALIRAASYPRDLTLPTWPDLTANQADEWLEWLREVWALPEFAAAVGQAAPDLADQITHVLAQESMPARRVRRL VETTVRYLLRWTTRPTPFGRFAGVAPLAFGPRAAVWWGDQHHEVVRLDDRSVAEYTAVTERDLAVLRGVTVMTNTLGYRR GGVWVLPCARVEGDRVWDVEINLTAPVLVAVEKARAPIPFRELAATVAEDQAIGTAKAERLLGALVGAGVLLSAVRPPMT VTDPAAHLARHIALPNPGERSAVDLRVDCSVTLPPAVVREAQEAAAALVAVAPRLPGWAAYHSAFSERWGPGAAVPLREV VGILGFPAGYRGSLRRDAATFTARDALLATLAQRSALDGCAEVLLDDDLIGQLRSEDDRPPIPHTELRFTLAAGTLQDLD RGAFTLTVVSGARHAGVAGGRFLHLLTPTELDQFRSIYTSLPTALPGADAVQLSGPPLDPRLATVARTPELLPVLPVGDL HADPVCTVDDLAVAADGQRLWLVSRLTGRPVEPLLFNCVLLATHQQPLVRFLTEIWTAWTAPCARFDWGHARTLPFLPRV RRGRSILHPARWTIPAEALPARTATWPQWRAAWHQHHERRQLPQEVLIGGDDVRLRLDLDENAHLAVLRSHLDRHGRAVL TETDGPSGWIDGRPAELLLTLTRTPPAHRLAARRARPVSVPAHRPGRSRWLDARLVGQADHVLARLSEFPGLPAGWWFLR YPHPEPHLRLRIPLRGIAQFADVARGLAGWAEQLHDDGLLADYTLATYRPETRWGCGQTLAAAEAVFAADSRAALTWTSG DRQAGTAAGMIAIAGGFTDDGARWLVEHAPHGGGSRLEPAQIAGARLTYGDEALTATLATYRTLAARDGLDLDQVLADLL HLHHARMIGPDLASERHCLRLARALAQTTLARRPS
Sequences:
>Translated_915_residues MYQAAHAALIRAASYPRDLTLPTWPDLTANQADEWLEWLREVWALPEFAAAVGQAAPDLADQITHVLAQESMPARRVRRL VETTVRYLLRWTTRPTPFGRFAGVAPLAFGPRAAVWWGDQHHEVVRLDDRSVAEYTAVTERDLAVLRGVTVMTNTLGYRR GGVWVLPCARVEGDRVWDVEINLTAPVLVAVEKARAPIPFRELAATVAEDQAIGTAKAERLLGALVGAGVLLSAVRPPMT VTDPAAHLARHIALPNPGERSAVDLRVDCSVTLPPAVVREAQEAAAALVAVAPRLPGWAAYHSAFSERWGPGAAVPLREV VGILGFPAGYRGSLRRDAATFTARDALLATLAQRSALDGCAEVLLDDDLIGQLRSEDDRPPIPHTELRFTLAAGTLQDLD RGAFTLTVVSGARHAGVAGGRFLHLLTPTELDQFRSIYTSLPTALPGADAVQLSGPPLDPRLATVARTPELLPVLPVGDL HADPVCTVDDLAVAADGQRLWLVSRLTGRPVEPLLFNCVLLATHQQPLVRFLTEIWTAWTAPCARFDWGHARTLPFLPRV RRGRSILHPARWTIPAEALPARTATWPQWRAAWHQHHERRQLPQEVLIGGDDVRLRLDLDENAHLAVLRSHLDRHGRAVL TETDGPSGWIDGRPAELLLTLTRTPPAHRLAARRARPVSVPAHRPGRSRWLDARLVGQADHVLARLSEFPGLPAGWWFLR YPHPEPHLRLRIPLRGIAQFADVARGLAGWAEQLHDDGLLADYTLATYRPETRWGCGQTLAAAEAVFAADSRAALTWTSG DRQAGTAAGMIAIAGGFTDDGARWLVEHAPHGGGSRLEPAQIAGARLTYGDEALTATLATYRTLAARDGLDLDQVLADLL HLHHARMIGPDLASERHCLRLARALAQTTLARRPS >Mature_915_residues MYQAAHAALIRAASYPRDLTLPTWPDLTANQADEWLEWLREVWALPEFAAAVGQAAPDLADQITHVLAQESMPARRVRRL VETTVRYLLRWTTRPTPFGRFAGVAPLAFGPRAAVWWGDQHHEVVRLDDRSVAEYTAVTERDLAVLRGVTVMTNTLGYRR GGVWVLPCARVEGDRVWDVEINLTAPVLVAVEKARAPIPFRELAATVAEDQAIGTAKAERLLGALVGAGVLLSAVRPPMT VTDPAAHLARHIALPNPGERSAVDLRVDCSVTLPPAVVREAQEAAAALVAVAPRLPGWAAYHSAFSERWGPGAAVPLREV VGILGFPAGYRGSLRRDAATFTARDALLATLAQRSALDGCAEVLLDDDLIGQLRSEDDRPPIPHTELRFTLAAGTLQDLD RGAFTLTVVSGARHAGVAGGRFLHLLTPTELDQFRSIYTSLPTALPGADAVQLSGPPLDPRLATVARTPELLPVLPVGDL HADPVCTVDDLAVAADGQRLWLVSRLTGRPVEPLLFNCVLLATHQQPLVRFLTEIWTAWTAPCARFDWGHARTLPFLPRV RRGRSILHPARWTIPAEALPARTATWPQWRAAWHQHHERRQLPQEVLIGGDDVRLRLDLDENAHLAVLRSHLDRHGRAVL TETDGPSGWIDGRPAELLLTLTRTPPAHRLAARRARPVSVPAHRPGRSRWLDARLVGQADHVLARLSEFPGLPAGWWFLR YPHPEPHLRLRIPLRGIAQFADVARGLAGWAEQLHDDGLLADYTLATYRPETRWGCGQTLAAAEAVFAADSRAALTWTSG DRQAGTAAGMIAIAGGFTDDGARWLVEHAPHGGGSRLEPAQIAGARLTYGDEALTATLATYRTLAARDGLDLDQVLADLL HLHHARMIGPDLASERHCLRLARALAQTTLARRPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99845; Mature: 99845
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQAAHAALIRAASYPRDLTLPTWPDLTANQADEWLEWLREVWALPEFAAAVGQAAPDLA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHH DQITHVLAQESMPARRVRRLVETTVRYLLRWTTRPTPFGRFAGVAPLAFGPRAAVWWGDQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEECCC HHEVVRLDDRSVAEYTAVTERDLAVLRGVTVMTNTLGYRRGGVWVLPCARVEGDRVWDVE CCCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEE INLTAPVLVAVEKARAPIPFRELAATVAEDQAIGTAKAERLLGALVGAGVLLSAVRPPMT EECCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC VTDPAAHLARHIALPNPGERSAVDLRVDCSVTLPPAVVREAQEAAAALVAVAPRLPGWAA CCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHH YHSAFSERWGPGAAVPLREVVGILGFPAGYRGSLRRDAATFTARDALLATLAQRSALDGC HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AEVLLDDDLIGQLRSEDDRPPIPHTELRFTLAAGTLQDLDRGAFTLTVVSGARHAGVAGG HHHHHCHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCEEEEEECCCCCCCCCCC RFLHLLTPTELDQFRSIYTSLPTALPGADAVQLSGPPLDPRLATVARTPELLPVLPVGDL CEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCEEECCCCCC HADPVCTVDDLAVAADGQRLWLVSRLTGRPVEPLLFNCVLLATHQQPLVRFLTEIWTAWT CCCCCCCHHHEEEECCCCEEEEEECCCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHC APCARFDWGHARTLPFLPRVRRGRSILHPARWTIPAEALPARTATWPQWRAAWHQHHERR CCHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH QLPQEVLIGGDDVRLRLDLDENAHLAVLRSHLDRHGRAVLTETDGPSGWIDGRPAELLLT CCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEE LTRTPPAHRLAARRARPVSVPAHRPGRSRWLDARLVGQADHVLARLSEFPGLPAGWWFLR EECCCCHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHCHHHHHHHHHHHCCCCCCCEEEEE YPHPEPHLRLRIPLRGIAQFADVARGLAGWAEQLHDDGLLADYTLATYRPETRWGCGQTL CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHH AAAEAVFAADSRAALTWTSGDRQAGTAAGMIAIAGGFTDDGARWLVEHAPHGGGSRLEPA HHHHHHHCCCCCEEEEECCCCCCCCCHHCEEEEECCCCCCCHHHHHHCCCCCCCCCCCHH QIAGARLTYGDEALTATLATYRTLAARDGLDLDQVLADLLHLHHARMIGPDLASERHCLR HHCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LARALAQTTLARRPS HHHHHHHHHHHCCCC >Mature Secondary Structure MYQAAHAALIRAASYPRDLTLPTWPDLTANQADEWLEWLREVWALPEFAAAVGQAAPDLA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHH DQITHVLAQESMPARRVRRLVETTVRYLLRWTTRPTPFGRFAGVAPLAFGPRAAVWWGDQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEEEECCC HHEVVRLDDRSVAEYTAVTERDLAVLRGVTVMTNTLGYRRGGVWVLPCARVEGDRVWDVE CCCEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEE INLTAPVLVAVEKARAPIPFRELAATVAEDQAIGTAKAERLLGALVGAGVLLSAVRPPMT EECCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC VTDPAAHLARHIALPNPGERSAVDLRVDCSVTLPPAVVREAQEAAAALVAVAPRLPGWAA CCCHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHH YHSAFSERWGPGAAVPLREVVGILGFPAGYRGSLRRDAATFTARDALLATLAQRSALDGC HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AEVLLDDDLIGQLRSEDDRPPIPHTELRFTLAAGTLQDLDRGAFTLTVVSGARHAGVAGG HHHHHCHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCEEEEEECCCCCCCCCCC RFLHLLTPTELDQFRSIYTSLPTALPGADAVQLSGPPLDPRLATVARTPELLPVLPVGDL CEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCEEECCCCCC HADPVCTVDDLAVAADGQRLWLVSRLTGRPVEPLLFNCVLLATHQQPLVRFLTEIWTAWT CCCCCCCHHHEEEECCCCEEEEEECCCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHC APCARFDWGHARTLPFLPRVRRGRSILHPARWTIPAEALPARTATWPQWRAAWHQHHERR CCHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH QLPQEVLIGGDDVRLRLDLDENAHLAVLRSHLDRHGRAVLTETDGPSGWIDGRPAELLLT CCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEE LTRTPPAHRLAARRARPVSVPAHRPGRSRWLDARLVGQADHVLARLSEFPGLPAGWWFLR EECCCCHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHCHHHHHHHHHHHCCCCCCCEEEEE YPHPEPHLRLRIPLRGIAQFADVARGLAGWAEQLHDDGLLADYTLATYRPETRWGCGQTL CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCHHH AAAEAVFAADSRAALTWTSGDRQAGTAAGMIAIAGGFTDDGARWLVEHAPHGGGSRLEPA HHHHHHHCCCCCEEEEECCCCCCCCCHHCEEEEECCCCCCCHHHHHHCCCCCCCCCCCHH QIAGARLTYGDEALTATLATYRTLAARDGLDLDQVLADLLHLHHARMIGPDLASERHCLR HHCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH LARALAQTTLARRPS HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA