Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is spaC [H]

Identifier: 158318486

GI number: 158318486

Start: 8214923

End: 8215999

Strand: Reverse

Name: spaC [H]

Synonym: Franean1_6754

Alternate gene names: 158318486

Gene position: 8215999-8214923 (Counterclockwise)

Preceding gene: 158318487

Following gene: 158318485

Centisome position: 91.47

GC content: 73.54

Gene sequence:

>1077_bases
GTGACGGCAGGACAGTCCCTCGGCGACGGCGCGGCCGGCGTCGCTCTCCTCCATCTGGAGACCGGCAACTGGCCGGCGGC
GTACGCGGCGCTAGAGCAGGCCGTCGCCGGCGGCGTCAGCGTCGCCGAGTCCGCCAGCCTCTACTACGGCGCTCCCACCC
TCGCCTTCATTCTCACCGGCACCGACCGGCCCAGCCTCGCGCGAGCGACCGCGACCGCCGCAGCGGGGACCACCACGCTG
ACCCGTCGCCGTCTCGATGCGGCCCATCGGCGCATCGACACGCACCAGCGCCCGCCCTACGCCGAGTACGACCTGATCCG
CGGCCTGACCGGACTCGGTGTCGCGCTGCGCCGCATCGGAGATCTCGACCTGCTCCGCGACGTGCTGACCTACCTGGTGC
GTCTCACCGAACCGATCGACGGTCTGCCTGGCTGGTGGTGCGCCCACGGCCCTCACCGGGGCCAGCCGGCTCCGGGCGGG
CACGGCAATCACGGTATGGCCCACGGCATCACCGGTCCCCTCGCGCTCCTGGCCCTCGCCCATCTCGACGGCGTCCACGT
CGACGGCCACACGGAAGCGATCACACAGATCGTCCGATGGCTCGACGACTGGCAGCAGCGCACCGGTGACGGCGCCGCGT
GGTGGCCGCAAACCGTCACCCTCACCGAACTCGAGGACGGTGAGCCCGCCCAGGCCGGCCCGCTGCGCCCCTCGTGGTGT
TACGGAACCCCCGGCATCGCCCGCGCCCAGCAGCTCGCCGCCCACGCCCTCGACGACGTCGCCCGCCAGCGCAACGCCGA
AGAAGCGTTCACCGGGTGCGTCAGCGACCCCGCGCAGGTCGGCCGTCTCCACGACCGCGGCCTGTGCCACGGAACCGCCG
GACTCCTCGCCACCGGGCGCCGCATCGCCGCGGACGCCCTCACCCCGATCCCCCTCTCACCCCTGCTGCAGATGCACCAG
CACACCGCCGCCACGGCCGGCGAACCCGCCGGGTTCCTCGACGGCACGACCGGCGCCGACCTGGTCACCGCTGGGACGAC
CGCGACCTCGTGGGACGCCTGCCTCCTGCTCTGCTGA

Upstream 100 bases:

>100_bases
TGCACCACGCCCGCATGATCGGCCCCGATCTGGCGTCCGAACGGCACTGTCTGCGCCTGGCCCGCGCCCTCGCCCAGACC
ACCCTGGCCAGGAGGCCATC

Downstream 100 bases:

>100_bases
CCGAAAGGCACGATCATGGACGAGACCCCGTGGAGGCAAATAAACATCACCTGGCCCGGCCCGGACCGTCATCAGCGTGA
ACGTCAGGCCATCGATCATC

Product: lanthionine synthetase C family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTAGQSLGDGAAGVALLHLETGNWPAAYAALEQAVAGGVSVAESASLYYGAPTLAFILTGTDRPSLARATATAAAGTTTL
TRRRLDAAHRRIDTHQRPPYAEYDLIRGLTGLGVALRRIGDLDLLRDVLTYLVRLTEPIDGLPGWWCAHGPHRGQPAPGG
HGNHGMAHGITGPLALLALAHLDGVHVDGHTEAITQIVRWLDDWQQRTGDGAAWWPQTVTLTELEDGEPAQAGPLRPSWC
YGTPGIARAQQLAAHALDDVARQRNAEEAFTGCVSDPAQVGRLHDRGLCHGTAGLLATGRRIAADALTPIPLSPLLQMHQ
HTAATAGEPAGFLDGTTGADLVTAGTTATSWDACLLLC

Sequences:

>Translated_358_residues
MTAGQSLGDGAAGVALLHLETGNWPAAYAALEQAVAGGVSVAESASLYYGAPTLAFILTGTDRPSLARATATAAAGTTTL
TRRRLDAAHRRIDTHQRPPYAEYDLIRGLTGLGVALRRIGDLDLLRDVLTYLVRLTEPIDGLPGWWCAHGPHRGQPAPGG
HGNHGMAHGITGPLALLALAHLDGVHVDGHTEAITQIVRWLDDWQQRTGDGAAWWPQTVTLTELEDGEPAQAGPLRPSWC
YGTPGIARAQQLAAHALDDVARQRNAEEAFTGCVSDPAQVGRLHDRGLCHGTAGLLATGRRIAADALTPIPLSPLLQMHQ
HTAATAGEPAGFLDGTTGADLVTAGTTATSWDACLLLC
>Mature_357_residues
TAGQSLGDGAAGVALLHLETGNWPAAYAALEQAVAGGVSVAESASLYYGAPTLAFILTGTDRPSLARATATAAAGTTTLT
RRRLDAAHRRIDTHQRPPYAEYDLIRGLTGLGVALRRIGDLDLLRDVLTYLVRLTEPIDGLPGWWCAHGPHRGQPAPGGH
GNHGMAHGITGPLALLALAHLDGVHVDGHTEAITQIVRWLDDWQQRTGDGAAWWPQTVTLTELEDGEPAQAGPLRPSWCY
GTPGIARAQQLAAHALDDVARQRNAEEAFTGCVSDPAQVGRLHDRGLCHGTAGLLATGRRIAADALTPIPLSPLLQMHQH
TAATAGEPAGFLDGTTGADLVTAGTTATSWDACLLLC

Specific function: Could be implicated in the processing or the export process of the subtilin lantibiotic [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.epidermidis epiC and L.lactis nisC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007822
- InterPro:   IPR020452 [H]

Pfam domain/function: PF05147 LANC_like [H]

EC number: NA

Molecular weight: Translated: 37498; Mature: 37366

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGQSLGDGAAGVALLHLETGNWPAAYAALEQAVAGGVSVAESASLYYGAPTLAFILTG
CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHCCCEEECCCEEEEEEEC
TDRPSLARATATAAAGTTTLTRRRLDAAHRRIDTHQRPPYAEYDLIRGLTGLGVALRRIG
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
DLDLLRDVLTYLVRLTEPIDGLPGWWCAHGPHRGQPAPGGHGNHGMAHGITGPLALLALA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
HLDGVHVDGHTEAITQIVRWLDDWQQRTGDGAAWWPQTVTLTELEDGEPAQAGPLRPSWC
HHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
YGTPGIARAQQLAAHALDDVARQRNAEEAFTGCVSDPAQVGRLHDRGLCHGTAGLLATGR
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCHHHCCCCCCCHHHHHCCC
RIAADALTPIPLSPLLQMHQHTAATAGEPAGFLDGTTGADLVTAGTTATSWDACLLLC
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEC
>Mature Secondary Structure 
TAGQSLGDGAAGVALLHLETGNWPAAYAALEQAVAGGVSVAESASLYYGAPTLAFILTG
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHCCCEEECCCEEEEEEEC
TDRPSLARATATAAAGTTTLTRRRLDAAHRRIDTHQRPPYAEYDLIRGLTGLGVALRRIG
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
DLDLLRDVLTYLVRLTEPIDGLPGWWCAHGPHRGQPAPGGHGNHGMAHGITGPLALLALA
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
HLDGVHVDGHTEAITQIVRWLDDWQQRTGDGAAWWPQTVTLTELEDGEPAQAGPLRPSWC
HHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
YGTPGIARAQQLAAHALDDVARQRNAEEAFTGCVSDPAQVGRLHDRGLCHGTAGLLATGR
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCHHHCCCCCCCHHHHHCCC
RIAADALTPIPLSPLLQMHQHTAATAGEPAGFLDGTTGADLVTAGTTATSWDACLLLC
HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1539969; 1735728 [H]