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The map label for this gene is yhdJ [C]

Identifier: 158318454

GI number: 158318454

Start: 8175418

End: 8176296

Strand: Reverse

Name: yhdJ [C]

Synonym: Franean1_6722

Alternate gene names: 158318454

Gene position: 8176296-8175418 (Counterclockwise)

Preceding gene: 158318455

Following gene: 158318453

Centisome position: 91.03

GC content: 71.67

Gene sequence:

>879_bases
GTGGCTGACCGGCACACCCCTATTCCGCTCACCGTCTGGGCGGTGTCGCAGACCCACCCCCGTTTCCAGCGGCTAAACCG
CTACACCCCCGAATCCCTCGCGCACCCCGCCCGCATGCTGCCCGCCCTCGCCCGCCACATCATCACCACCTTCACCGAGC
CGGGTGATCTCGTCGTGGACCCCATGTGCGGCATCGGAACCACCCTCGTCGAAGCCGCGCACCTCGGCCGCCGGGCCCTT
GGGGTCGAATACGAACCCCGCTGGGCCGGCATCGGCCGCGCCAACGCCGCCCTCGCGCATACCCAGGGCGCCACCGGGAC
CATCCAGCTCATCACCGGCGACTCCCGCCACCTCCCCGCACTTGCCCCCGAGAGTGCGCGCGGAAAAGCCTCGCTGGTTC
TCACCTCACCGCCCTACGGGAAAGCCACCCACGGCACCGTCGATGCCGACCGGGTGAACGGGGTCCGCAAACGCGACTAC
ACCTACAGCACCGGCCGGCCTGGCCGGGTCGGGAACCTCGCCGCCGCCGACCTCACCGACCTTCTCACCGGATTCACTGA
GATTCTCACCGGTGCCGCCGCGCTGTTGCGCCCCGGTGGAATCATCGCGATCGCCGTGCGCCCCTACCGCCAGGATGGTG
AGCTCATCGACCTGCCCGGCGCGATCCTGCACAGCGCGCAGAGGGTCGGGCTCGTCCGCGCCGGGCGCGCCGCAGCCCTC
CTCGCGGGCCTGCGCGAGGGCCGCCTGGTCCCGCGCACGACGTTCTTCGCCCTCCACAACGCCCGCACCGCCCACGCCGC
CGGCACCCCCCTCCACATCACAGCCCACGAGGACATCCTTCTCCTGACACCCCCGCCCGTAGCCCGTCCGCAGGCCTGA

Upstream 100 bases:

>100_bases
GACGACGAACTCCACCCTCCGGCAGAGATCTCGTCCGACCACGGGATGCTGGAGCCCGTCCACACCGACCTGGCCGTGTT
CACCCGGCCCGGTGGTGCGC

Downstream 100 bases:

>100_bases
CACTGGCGCTGGCCTGCGCAAACACGACCTGACGGTGATCTGACGGTGATCTGACACAAGTTGCGCACGCAACAACAGTC
AGATCACCGTCAGATCCCAC

Product: putative RNA methylase

Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]

Alternate protein names: DNA Methylase N-4/N-6 Domain-Containing Protein; DNA Methylase N-4/N-6 Domain Protein; DNA Methylase-Like Protein

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MADRHTPIPLTVWAVSQTHPRFQRLNRYTPESLAHPARMLPALARHIITTFTEPGDLVVDPMCGIGTTLVEAAHLGRRAL
GVEYEPRWAGIGRANAALAHTQGATGTIQLITGDSRHLPALAPESARGKASLVLTSPPYGKATHGTVDADRVNGVRKRDY
TYSTGRPGRVGNLAAADLTDLLTGFTEILTGAAALLRPGGIIAIAVRPYRQDGELIDLPGAILHSAQRVGLVRAGRAAAL
LAGLREGRLVPRTTFFALHNARTAHAAGTPLHITAHEDILLLTPPPVARPQA

Sequences:

>Translated_292_residues
MADRHTPIPLTVWAVSQTHPRFQRLNRYTPESLAHPARMLPALARHIITTFTEPGDLVVDPMCGIGTTLVEAAHLGRRAL
GVEYEPRWAGIGRANAALAHTQGATGTIQLITGDSRHLPALAPESARGKASLVLTSPPYGKATHGTVDADRVNGVRKRDY
TYSTGRPGRVGNLAAADLTDLLTGFTEILTGAAALLRPGGIIAIAVRPYRQDGELIDLPGAILHSAQRVGLVRAGRAAAL
LAGLREGRLVPRTTFFALHNARTAHAAGTPLHITAHEDILLLTPPPVARPQA
>Mature_291_residues
ADRHTPIPLTVWAVSQTHPRFQRLNRYTPESLAHPARMLPALARHIITTFTEPGDLVVDPMCGIGTTLVEAAHLGRRALG
VEYEPRWAGIGRANAALAHTQGATGTIQLITGDSRHLPALAPESARGKASLVLTSPPYGKATHGTVDADRVNGVRKRDYT
YSTGRPGRVGNLAAADLTDLLTGFTEILTGAAALLRPGGIIAIAVRPYRQDGELIDLPGAILHSAQRVGLVRAGRAAALL
AGLREGRLVPRTTFFALHNARTAHAAGTPLHITAHEDILLLTPPPVARPQA

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 31013; Mature: 30882

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS00093 N4_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRHTPIPLTVWAVSQTHPRFQRLNRYTPESLAHPARMLPALARHIITTFTEPGDLVVD
CCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEC
PMCGIGTTLVEAAHLGRRALGVEYEPRWAGIGRANAALAHTQGATGTIQLITGDSRHLPA
CCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCC
LAPESARGKASLVLTSPPYGKATHGTVDADRVNGVRKRDYTYSTGRPGRVGNLAAADLTD
CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCHHCCCEECCCCCCCCCCCHHHHHHH
LLTGFTEILTGAAALLRPGGIIAIAVRPYRQDGELIDLPGAILHSAQRVGLVRAGRAAAL
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHH
LAGLREGRLVPRTTFFALHNARTAHAAGTPLHITAHEDILLLTPPPVARPQA
HHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCCCC
>Mature Secondary Structure 
ADRHTPIPLTVWAVSQTHPRFQRLNRYTPESLAHPARMLPALARHIITTFTEPGDLVVD
CCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCEEEC
PMCGIGTTLVEAAHLGRRALGVEYEPRWAGIGRANAALAHTQGATGTIQLITGDSRHLPA
CCCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCC
LAPESARGKASLVLTSPPYGKATHGTVDADRVNGVRKRDYTYSTGRPGRVGNLAAADLTD
CCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCHHCCCEECCCCCCCCCCCHHHHHHH
LLTGFTEILTGAAALLRPGGIIAIAVRPYRQDGELIDLPGAILHSAQRVGLVRAGRAAAL
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHH
LAGLREGRLVPRTTFFALHNARTAHAAGTPLHITAHEDILLLTPPPVARPQA
HHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]

Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA