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The map label for this gene is 158318453

Identifier: 158318453

GI number: 158318453

Start: 8173310

End: 8174794

Strand: Reverse

Name: 158318453

Synonym: Franean1_6721

Alternate gene names: NA

Gene position: 8174794-8173310 (Counterclockwise)

Preceding gene: 158318454

Following gene: 158318452

Centisome position: 91.01

GC content: 64.04

Gene sequence:

>1485_bases
TTGAAAGGGTCCATCTTCAAGAAATGCGGCTGCCGCGACCCTATGACGAAACGGCAGCTAGGAAGAGCGTGTCCGAAACT
TCGCCGTTCGAACGGCGGCTGGCGAACCGACCATGGAACCTGGGCCTACCGCATCGACCTGCCGCCCCACCCTGACGGTA
GGCGCCGCCTCGTCAGCCGCAGCGGATTCCCCACCCAGGCCGAAACGCGCGCAGAATGCGAACGTATCGAAGCCCTCATC
GCCATCCCCGACGCAGGAGACAACACCGGCCGCCAAAGCATCGCCGACATCATCGGCAACGCCATCAGCACCAACAAGCC
CCTCCCTGACATCGACGACGTCAAGAACCGATACCGGCGCAACGCGGACCTCAACCCCGACATCACCATCAGCGCCTGGA
TGGAACGCTGGCTCGCCAGTAGAAAGAACATCCGACCGAAAACCCGCCTGGGCTACGAAAGTTACATCAGAGTCCACATC
ACGCCAGCCATCGGCTCCGTACAGCTCACCAAACTCACCGTCTCCCACCTCGACGACATGTTCACCGCCATCGACAACAC
CAACATCAGGATCATCCAGGACCTTCAATCCGACGATCCCCGAATCCGACGCGCAGCCCGCGGCAAAAGACCCACAGGAC
CCGCCACCCAGCAGCGCATCCGAGAAGTACTCCGCGCCGCAATCAACGACGCCAACCGCCGAGGACTCATGACCCACAAC
CCAGCCAAGTACGTCGAACTCCGCTCCGGAAAACGACCCAAAGCACTCCTGTGGACAGATGAACGCGTCGCGCGTTGGCG
AGAAACAGGCACCAAACCCTCACCCGTCATGGTCTGGACCCCGACCCAGACCGGGATGTTCCTCGACCATGCCCACAGCG
ACCCGCTCTACCCCGTCTACCACCTCATCGCTTACCGAGGCCTCCGTCGCGGCGAATCCGTCGCTGTGCACCTGGACGAC
ATCGACATCACCGAGGCAACCCTCACCATCCGCTGGCAGTTCGTCCAGATCGGCTACGCCACCCAACTCGCAAAGCCGAA
ATCCGACGCCGGGGACCGTGTCATCTCCCTCGACCCCGACACCCTCGCCGTCCTGAAAGCCTGCAGAACCCGCCAACACA
CGGCCCGACTCGCCGCCGGTACGGCCTGGCCGAACAACGGCCTCGCGTTCACCCACCCCGACGGCAGCCCCATCCACCCC
GAACATCTCACCAACCGCTTCCAGACCCTGGTCCAGGAAGCCGACCTACCACCCATCACCATCCATGGCCTGCGCCACGG
CGCCGCCACCCTCGCCCTCGCCGCCGGAGCCGACCTCAAAGCAGTCCAAGAGCTCCTCGGCCACTCCACCATCATGCTCA
CCGCCGACACCTACACCCAGATCCTCCCCGATCTCGCCGCCGAGATCGCCCGCAACACCGCCCGCCTCATCCCCCGCACC
CGCAGCCCCCACGACTACCCCCGACACCACACCACGACCGACTAA

Upstream 100 bases:

>100_bases
TTTGACACACCGGTTTTATCGAGCATCAATGGGACCGCCACCGAAACATTTATTCGGGCTCGGTAGATAACGGCTGATCA
ACGATACTGGAGTGTGAGCG

Downstream 100 bases:

>100_bases
CCCACGCCGACCCGTCCGACCCGTCCGACCCGTCCGGGTCGGACGGGTCGGACGGGTCGCAGCGAACCACCACAACCCAC
CCCATCGCACCGGCCGCCGT

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MKGSIFKKCGCRDPMTKRQLGRACPKLRRSNGGWRTDHGTWAYRIDLPPHPDGRRRLVSRSGFPTQAETRAECERIEALI
AIPDAGDNTGRQSIADIIGNAISTNKPLPDIDDVKNRYRRNADLNPDITISAWMERWLASRKNIRPKTRLGYESYIRVHI
TPAIGSVQLTKLTVSHLDDMFTAIDNTNIRIIQDLQSDDPRIRRAARGKRPTGPATQQRIREVLRAAINDANRRGLMTHN
PAKYVELRSGKRPKALLWTDERVARWRETGTKPSPVMVWTPTQTGMFLDHAHSDPLYPVYHLIAYRGLRRGESVAVHLDD
IDITEATLTIRWQFVQIGYATQLAKPKSDAGDRVISLDPDTLAVLKACRTRQHTARLAAGTAWPNNGLAFTHPDGSPIHP
EHLTNRFQTLVQEADLPPITIHGLRHGAATLALAAGADLKAVQELLGHSTIMLTADTYTQILPDLAAEIARNTARLIPRT
RSPHDYPRHHTTTD

Sequences:

>Translated_494_residues
MKGSIFKKCGCRDPMTKRQLGRACPKLRRSNGGWRTDHGTWAYRIDLPPHPDGRRRLVSRSGFPTQAETRAECERIEALI
AIPDAGDNTGRQSIADIIGNAISTNKPLPDIDDVKNRYRRNADLNPDITISAWMERWLASRKNIRPKTRLGYESYIRVHI
TPAIGSVQLTKLTVSHLDDMFTAIDNTNIRIIQDLQSDDPRIRRAARGKRPTGPATQQRIREVLRAAINDANRRGLMTHN
PAKYVELRSGKRPKALLWTDERVARWRETGTKPSPVMVWTPTQTGMFLDHAHSDPLYPVYHLIAYRGLRRGESVAVHLDD
IDITEATLTIRWQFVQIGYATQLAKPKSDAGDRVISLDPDTLAVLKACRTRQHTARLAAGTAWPNNGLAFTHPDGSPIHP
EHLTNRFQTLVQEADLPPITIHGLRHGAATLALAAGADLKAVQELLGHSTIMLTADTYTQILPDLAAEIARNTARLIPRT
RSPHDYPRHHTTTD
>Mature_494_residues
MKGSIFKKCGCRDPMTKRQLGRACPKLRRSNGGWRTDHGTWAYRIDLPPHPDGRRRLVSRSGFPTQAETRAECERIEALI
AIPDAGDNTGRQSIADIIGNAISTNKPLPDIDDVKNRYRRNADLNPDITISAWMERWLASRKNIRPKTRLGYESYIRVHI
TPAIGSVQLTKLTVSHLDDMFTAIDNTNIRIIQDLQSDDPRIRRAARGKRPTGPATQQRIREVLRAAINDANRRGLMTHN
PAKYVELRSGKRPKALLWTDERVARWRETGTKPSPVMVWTPTQTGMFLDHAHSDPLYPVYHLIAYRGLRRGESVAVHLDD
IDITEATLTIRWQFVQIGYATQLAKPKSDAGDRVISLDPDTLAVLKACRTRQHTARLAAGTAWPNNGLAFTHPDGSPIHP
EHLTNRFQTLVQEADLPPITIHGLRHGAATLALAAGADLKAVQELLGHSTIMLTADTYTQILPDLAAEIARNTARLIPRT
RSPHDYPRHHTTTD

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 55401; Mature: 55401

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSIFKKCGCRDPMTKRQLGRACPKLRRSNGGWRTDHGTWAYRIDLPPHPDGRRRLVSR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCHHHHHHHC
SGFPTQAETRAECERIEALIAIPDAGDNTGRQSIADIIGNAISTNKPLPDIDDVKNRYRR
CCCCCCHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHC
NADLNPDITISAWMERWLASRKNIRPKTRLGYESYIRVHITPAIGSVQLTKLTVSHLDDM
CCCCCCCEEHHHHHHHHHHHHCCCCCHHHCCCEEEEEEEEEECCCCEEEEHHHHHHHHHH
FTAIDNTNIRIIQDLQSDDPRIRRAARGKRPTGPATQQRIREVLRAAINDANRRGLMTHN
HHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PAKYVELRSGKRPKALLWTDERVARWRETGTKPSPVMVWTPTQTGMFLDHAHSDPLYPVY
CHHHHEECCCCCCCEEEECHHHHHHHHHCCCCCCCEEEECCCCCCCEEECCCCCCCHHHH
HLIAYRGLRRGESVAVHLDDIDITEATLTIRWQFVQIGYATQLAKPKSDAGDRVISLDPD
HHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEEEEEECHHHHHCCCCCCCCCEEEEECCH
TLAVLKACRTRQHTARLAAGTAWPNNGLAFTHPDGSPIHPEHLTNRFQTLVQEADLPPIT
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
IHGLRHGAATLALAAGADLKAVQELLGHSTIMLTADTYTQILPDLAAEIARNTARLIPRT
EECCCCCHHHEEEECCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
RSPHDYPRHHTTTD
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKGSIFKKCGCRDPMTKRQLGRACPKLRRSNGGWRTDHGTWAYRIDLPPHPDGRRRLVSR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCHHHHHHHC
SGFPTQAETRAECERIEALIAIPDAGDNTGRQSIADIIGNAISTNKPLPDIDDVKNRYRR
CCCCCCHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHC
NADLNPDITISAWMERWLASRKNIRPKTRLGYESYIRVHITPAIGSVQLTKLTVSHLDDM
CCCCCCCEEHHHHHHHHHHHHCCCCCHHHCCCEEEEEEEEEECCCCEEEEHHHHHHHHHH
FTAIDNTNIRIIQDLQSDDPRIRRAARGKRPTGPATQQRIREVLRAAINDANRRGLMTHN
HHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
PAKYVELRSGKRPKALLWTDERVARWRETGTKPSPVMVWTPTQTGMFLDHAHSDPLYPVY
CHHHHEECCCCCCCEEEECHHHHHHHHHCCCCCCCEEEECCCCCCCEEECCCCCCCHHHH
HLIAYRGLRRGESVAVHLDDIDITEATLTIRWQFVQIGYATQLAKPKSDAGDRVISLDPD
HHHHHHHCCCCCEEEEEECCCCEEEEEEEEEEEEEEECHHHHHCCCCCCCCCEEEEECCH
TLAVLKACRTRQHTARLAAGTAWPNNGLAFTHPDGSPIHPEHLTNRFQTLVQEADLPPIT
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEE
IHGLRHGAATLALAAGADLKAVQELLGHSTIMLTADTYTQILPDLAAEIARNTARLIPRT
EECCCCCHHHEEEECCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
RSPHDYPRHHTTTD
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]