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The map label for this gene is 158318445

Identifier: 158318445

GI number: 158318445

Start: 8154281

End: 8155348

Strand: Direct

Name: 158318445

Synonym: Franean1_6713

Alternate gene names: NA

Gene position: 8154281-8155348 (Clockwise)

Preceding gene: 158318443

Following gene: 158318447

Centisome position: 90.78

GC content: 67.23

Gene sequence:

>1068_bases
ATGTCCGTACGCCTGCTGTACCTGATCTTCGTTCGGGTCTGTAGCTGGCTGGTTCTACTCGGCCGCTCGTCGGCGTCGAA
GAACATCGAGCTGCTGGTGCTACGGCATGAGGTCACGGTGCTGCGCCATACCCAGCCCAAGCCCCGGTGGGACTGGGCAG
ACCGGGCGGTCCTCGCCGCACTGACCCGACTCCTACCCAGGGCACTGCGAGCCCACCGGCTGGTCACCCCTGGCACCGTC
CTCCGGTGGCACCGCCGTCTGATCACACGGAAATGGACCCACCCGCAGCGGACCGGACGGCCACCGATCAGCACGGAGAT
CGCCACGCTGATCAAGCGGCTCGCGACCGAGAACACGACATGGGGCTACCAGCGAATCCAGGGCGAGCTCCTCACGCTCG
GCCACGAGGTCGGCGCGTCCACGATCCGCCGGGTCCTGAAGACCCTCGGGCTGCCCCCGGCACCCAGGCGACACACCGAC
ACGACCTGGCGGCAGTTCCTACGCACCCAAGCCGCGACCATGCTGGCGGCCGACTTCTTCCATGTGGACTGCGCGGTGAC
GCTGCGGCGTCTGTACTGCTTCTTCGTCCTGGAAGTCGGCTCCCGCACCGTCCACATCCTCGGGGTCACCGCCCACCCCG
ACGGACCGTGGACCACCCAACAGATCCGCAACCTCCTCATGGACCTCGGCGCCCGGGCCGCCGACTTCCAGTTCCTGGTC
CGCGACCGGGCCGGACAATTCGCCGCATCCTTTGACGCGGTCCTCGCCGACGCCGGCATCACCACCGTCACGATCCCACC
CCGAACCCCCCGGGCGAACGCCTACGCTGAGCGGTTCGTTCTCACGGTCCGGACCGAGGTCACCGACCGCATGCTGATCT
TCGGTGAACGGCATCTGCGCACCGTCCTGGCCGACTACGCCGCCCACTACAACGGACAGCGACCCCACCGCGGCTGTGAC
CTTCAACCACCACGACCCGACCACCCCATCGCCGACCTGACCAAGGAACAGATCAAGCGCCGACCCATCCTCGGCGACTT
GATCAACGAATACGAACGAGCCGCCTAA

Upstream 100 bases:

>100_bases
CCCGAGCCGATCTCGACCGCCTGTGGGGTGCCAGAAGTCGGCTTGAGCCTGTGACCTGGGGCGATGCGCCGGCGCGGGGC
CGGCGGCATGATGGTCAACT

Downstream 100 bases:

>100_bases
ATGACCAGGTCAAGGCCGGTGGCCGAGTTCTGGCACCCCACACGTCGGCCGCGACCCAGCCGGTCGCCACGCCGGCGTCC
AGCGACCGGGTGAGCGTGCG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: Transposase; Integrase; Integrase Catalytic Subunit; LOW QUALITY PROTEIN Integrase; LOW QUALITY PROTEIN Transposase; LOW QUALITY PROTEIN Integrase Catalytic Region; Transposase IS; Tranposase; Aldo/Keto Reductase

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSVRLLYLIFVRVCSWLVLLGRSSASKNIELLVLRHEVTVLRHTQPKPRWDWADRAVLAALTRLLPRALRAHRLVTPGTV
LRWHRRLITRKWTHPQRTGRPPISTEIATLIKRLATENTTWGYQRIQGELLTLGHEVGASTIRRVLKTLGLPPAPRRHTD
TTWRQFLRTQAATMLAADFFHVDCAVTLRRLYCFFVLEVGSRTVHILGVTAHPDGPWTTQQIRNLLMDLGARAADFQFLV
RDRAGQFAASFDAVLADAGITTVTIPPRTPRANAYAERFVLTVRTEVTDRMLIFGERHLRTVLADYAAHYNGQRPHRGCD
LQPPRPDHPIADLTKEQIKRRPILGDLINEYERAA

Sequences:

>Translated_355_residues
MSVRLLYLIFVRVCSWLVLLGRSSASKNIELLVLRHEVTVLRHTQPKPRWDWADRAVLAALTRLLPRALRAHRLVTPGTV
LRWHRRLITRKWTHPQRTGRPPISTEIATLIKRLATENTTWGYQRIQGELLTLGHEVGASTIRRVLKTLGLPPAPRRHTD
TTWRQFLRTQAATMLAADFFHVDCAVTLRRLYCFFVLEVGSRTVHILGVTAHPDGPWTTQQIRNLLMDLGARAADFQFLV
RDRAGQFAASFDAVLADAGITTVTIPPRTPRANAYAERFVLTVRTEVTDRMLIFGERHLRTVLADYAAHYNGQRPHRGCD
LQPPRPDHPIADLTKEQIKRRPILGDLINEYERAA
>Mature_354_residues
SVRLLYLIFVRVCSWLVLLGRSSASKNIELLVLRHEVTVLRHTQPKPRWDWADRAVLAALTRLLPRALRAHRLVTPGTVL
RWHRRLITRKWTHPQRTGRPPISTEIATLIKRLATENTTWGYQRIQGELLTLGHEVGASTIRRVLKTLGLPPAPRRHTDT
TWRQFLRTQAATMLAADFFHVDCAVTLRRLYCFFVLEVGSRTVHILGVTAHPDGPWTTQQIRNLLMDLGARAADFQFLVR
DRAGQFAASFDAVLADAGITTVTIPPRTPRANAYAERFVLTVRTEVTDRMLIFGERHLRTVLADYAAHYNGQRPHRGCDL
QPPRPDHPIADLTKEQIKRRPILGDLINEYERAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40556; Mature: 40424

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRLLYLIFVRVCSWLVLLGRSSASKNIELLVLRHEVTVLRHTQPKPRWDWADRAVLAA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHH
LTRLLPRALRAHRLVTPGTVLRWHRRLITRKWTHPQRTGRPPISTEIATLIKRLATENTT
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
WGYQRIQGELLTLGHEVGASTIRRVLKTLGLPPAPRRHTDTTWRQFLRTQAATMLAADFF
CHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HVDCAVTLRRLYCFFVLEVGSRTVHILGVTAHPDGPWTTQQIRNLLMDLGARAADFQFLV
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHH
RDRAGQFAASFDAVLADAGITTVTIPPRTPRANAYAERFVLTVRTEVTDRMLIFGERHLR
HHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHEEEEEHHHHHHHHHHHHHHHH
TVLADYAAHYNGQRPHRGCDLQPPRPDHPIADLTKEQIKRRPILGDLINEYERAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SVRLLYLIFVRVCSWLVLLGRSSASKNIELLVLRHEVTVLRHTQPKPRWDWADRAVLAA
CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCHHHHHHHHH
LTRLLPRALRAHRLVTPGTVLRWHRRLITRKWTHPQRTGRPPISTEIATLIKRLATENTT
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
WGYQRIQGELLTLGHEVGASTIRRVLKTLGLPPAPRRHTDTTWRQFLRTQAATMLAADFF
CHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
HVDCAVTLRRLYCFFVLEVGSRTVHILGVTAHPDGPWTTQQIRNLLMDLGARAADFQFLV
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHH
RDRAGQFAASFDAVLADAGITTVTIPPRTPRANAYAERFVLTVRTEVTDRMLIFGERHLR
HHHCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHEEEEEHHHHHHHHHHHHHHHH
TVLADYAAHYNGQRPHRGCDLQPPRPDHPIADLTKEQIKRRPILGDLINEYERAA
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA