| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is feaR [C]
Identifier: 158318447
GI number: 158318447
Start: 8156327
End: 8157223
Strand: Direct
Name: feaR [C]
Synonym: Franean1_6715
Alternate gene names: 158318447
Gene position: 8156327-8157223 (Clockwise)
Preceding gene: 158318445
Following gene: 158318448
Centisome position: 90.81
GC content: 65.33
Gene sequence:
>897_bases ATGCCCACAACGATGGCTAGCGATCACGCCGACTGCTTCCGCGGGAGAATCGACGTGTCCGGCCTGTCCGGAACCACGGT GGTGGCACTCACCTTCTCGCCGCTGTCGGGTCGCCGGAGCCCCGCTCTCATCCGGCATCATGATCCGGAGGACTATTACC TGTTCATGGTCCACGGCAGCCCAATCAGACTGGAACAGTCCGGCAATGTCACATGCCTCACGGCCGGAGACATGGCTCTG TTCGACACGTCCCACCCTCTGGCGGCCGACTTCCTCGACCATGGCCGGCAGAAACGTGTGACGCTGATGCGGCTGCCCAG GGCTTCCCTGCCGCTGCCGGGCGGTACGACGGACTGCCTGCTGGGCAACACTCTCCTCACGCGAACCCCGACAGGGGCGC TGCTCGGCCAGTTCCTGTCCGGCTTCCGGGAGAATGCCGCCGCGTGTGGCTCGGCGGAACTGCATCGGCTGGGCCGCATC GGATTCGATCTGGCCGTCACTTTCCTCGCGAGCCACATCGACGCGCAGCACACTCTGCCTGTGGAAACCCGTGAGCATGT ACTGCGCGCACGCATCGACGCGTTCATCGAACACAACCTCGGCGATCGCGGTTTACGGCCGGCCACCATTGCCGCGCACC ACCACATATCCGTACGCACGCTGCACCAGCTGTTCCAGGGCCAGCCCGAGACGGTCAGCGCGATGATCCGGCGACGCCGC CTCGAACGGTGCAAGGTCGATCTTCTCAACCCGCAGCTGAGACACCACACGATTGGCGATATCTCCGCTCGGTGGGGATT CCGCCACCCCGCAGACTTCAGTCGCGCCTTCCGTGCCGCCTACGGCGCGCCGCCCAGGGACCTCAGACACCCAGAATCTC ACGGCCCTTGCACCTGA
Upstream 100 bases:
>100_bases AGCGCCCCTGGTGCAGGAACCTGTAACGACCCTGTCCACTGACATCGTGCCGGCGCGGGAACGGTTTGAGTGGTGGGCGC ATCGAATGTGTCAGGATATC
Downstream 100 bases:
>100_bases CCCGTGCGCCGCTTGCCAAGCCTCTCTGCGCTCTGTGCCAACGACTCAAGGACGCGAGACGTGGCACGCTGAATGTCCAG CAGGCCACGAGGGTCTTCAT
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcription Regulator; AraC Family Regulatory Protein; AraC-Family Transcriptional Regulator; Regulatory Protein; AraC Family Regulatory Helix-Turn-Helix Protein; AraC Family Regulator; Transcription Regulator AraC Family; Helix-Turn-Helix AraC Type; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; Cellobiose-Dependent Regulator TxtR; Nitrilase Regulator Protein; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; AraC Family Transcription Regulator Protein
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPTTMASDHADCFRGRIDVSGLSGTTVVALTFSPLSGRRSPALIRHHDPEDYYLFMVHGSPIRLEQSGNVTCLTAGDMAL FDTSHPLAADFLDHGRQKRVTLMRLPRASLPLPGGTTDCLLGNTLLTRTPTGALLGQFLSGFRENAAACGSAELHRLGRI GFDLAVTFLASHIDAQHTLPVETREHVLRARIDAFIEHNLGDRGLRPATIAAHHHISVRTLHQLFQGQPETVSAMIRRRR LERCKVDLLNPQLRHHTIGDISARWGFRHPADFSRAFRAAYGAPPRDLRHPESHGPCT
Sequences:
>Translated_298_residues MPTTMASDHADCFRGRIDVSGLSGTTVVALTFSPLSGRRSPALIRHHDPEDYYLFMVHGSPIRLEQSGNVTCLTAGDMAL FDTSHPLAADFLDHGRQKRVTLMRLPRASLPLPGGTTDCLLGNTLLTRTPTGALLGQFLSGFRENAAACGSAELHRLGRI GFDLAVTFLASHIDAQHTLPVETREHVLRARIDAFIEHNLGDRGLRPATIAAHHHISVRTLHQLFQGQPETVSAMIRRRR LERCKVDLLNPQLRHHTIGDISARWGFRHPADFSRAFRAAYGAPPRDLRHPESHGPCT >Mature_297_residues PTTMASDHADCFRGRIDVSGLSGTTVVALTFSPLSGRRSPALIRHHDPEDYYLFMVHGSPIRLEQSGNVTCLTAGDMALF DTSHPLAADFLDHGRQKRVTLMRLPRASLPLPGGTTDCLLGNTLLTRTPTGALLGQFLSGFRENAAACGSAELHRLGRIG FDLAVTFLASHIDAQHTLPVETREHVLRARIDAFIEHNLGDRGLRPATIAAHHHISVRTLHQLFQGQPETVSAMIRRRRL ERCKVDLLNPQLRHHTIGDISARWGFRHPADFSRAFRAAYGAPPRDLRHPESHGPCT
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: COG2207
COG function: function code K; AraC-type DNA-binding domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32906; Mature: 32775
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTMASDHADCFRGRIDVSGLSGTTVVALTFSPLSGRRSPALIRHHDPEDYYLFMVHGS CCCCCCCCCHHHHCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEEECC PIRLEQSGNVTCLTAGDMALFDTSHPLAADFLDHGRQKRVTLMRLPRASLPLPGGTTDCL EEEEECCCCEEEEEECCEEEEECCCCHHHHHHHCCCHHCCCEEECCCCCCCCCCCCHHHH LGNTLLTRTPTGALLGQFLSGFRENAAACGSAELHRLGRIGFDLAVTFLASHIDAQHTLP HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VETREHVLRARIDAFIEHNLGDRGLRPATIAAHHHISVRTLHQLFQGQPETVSAMIRRRR HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHCCCHHHHHHHHHHCCCCHHHHHHHHHHH LERCKVDLLNPQLRHHTIGDISARWGFRHPADFSRAFRAAYGAPPRDLRHPESHGPCT HHHHHHHHCCCHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCC >Mature Secondary Structure PTTMASDHADCFRGRIDVSGLSGTTVVALTFSPLSGRRSPALIRHHDPEDYYLFMVHGS CCCCCCCCHHHHCCCEEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCCEEEEEEECC PIRLEQSGNVTCLTAGDMALFDTSHPLAADFLDHGRQKRVTLMRLPRASLPLPGGTTDCL EEEEECCCCEEEEEECCEEEEECCCCHHHHHHHCCCHHCCCEEECCCCCCCCCCCCHHHH LGNTLLTRTPTGALLGQFLSGFRENAAACGSAELHRLGRIGFDLAVTFLASHIDAQHTLP HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VETREHVLRARIDAFIEHNLGDRGLRPATIAAHHHISVRTLHQLFQGQPETVSAMIRRRR HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHCCCHHHHHHHHHHCCCCHHHHHHHHHHH LERCKVDLLNPQLRHHTIGDISARWGFRHPADFSRAFRAAYGAPPRDLRHPESHGPCT HHHHHHHHCCCHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA