| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158318425
Identifier: 158318425
GI number: 158318425
Start: 8129601
End: 8129969
Strand: Direct
Name: 158318425
Synonym: Franean1_6693
Alternate gene names: NA
Gene position: 8129601-8129969 (Clockwise)
Preceding gene: 158318422
Following gene: 158318426
Centisome position: 90.51
GC content: 71.0
Gene sequence:
>369_bases ATGAGCGAGGTGGCGCTGGTCGCCGACCATCTCATCATCGTCGGGCGCGGGCGGGTCCTGGCTGACACCATCGTGCGGGA GCTGGTCCGGCAGGCCGGCGGCGACACCGTGGCGGTCGCCAGCGCCGACCCGGCGCGGCTGCGCGGCCTCCTGGCCGGTC CCGGGGTCGAGATCACGGCGACCACGGGGTCGGAGCAGTTGAGCGTGACCGGCATGTCGGCCCGCGAGATCGGGACCAGA GCCGCTGAACACGGCATCGCGCTGTTCGAGCTCACCGCCCGGACGGTCTCCCTGGAGGATGCCTTCATGGCCCTTACCAA GGACGCCGTCGAATACCATTCCGAGACGACCGTGGCGAGGGCGGCATGA
Upstream 100 bases:
>100_bases AGCAATAGCCAGTAGGTGTTTCCCGGCTGGCCGCCGTTAACAGGCAGGAAGCGGCTCCGGATGGCGCCGGTAAGTCCATC ACGATGCGAATGATCATCTG
Downstream 100 bases:
>100_bases CCACCATCGCTGAGACCCGGCCCGTACCCGCAACGCCGTCCCGGACGGCCGGCTCCGGTCAGAAGGTGACCGGCCGGCGG GTGCTGCGTTCCGAGTGGGC
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: ABC Transporter-Like Protein; Nodulation ABC Transporter NodI; ABC Transporter Related Protein; ATPase Component Of ABC-Type Multidrug Transport System; ABC-Type Multidrug Transport System ATPase Component; ABC Transporter-Related Protein; Multidrug ABC Transporter ATPase; Abc Transporter ATPase Subunit
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSEVALVADHLIIVGRGRVLADTIVRELVRQAGGDTVAVASADPARLRGLLAGPGVEITATTGSEQLSVTGMSAREIGTR AAEHGIALFELTARTVSLEDAFMALTKDAVEYHSETTVARAA
Sequences:
>Translated_122_residues MSEVALVADHLIIVGRGRVLADTIVRELVRQAGGDTVAVASADPARLRGLLAGPGVEITATTGSEQLSVTGMSAREIGTR AAEHGIALFELTARTVSLEDAFMALTKDAVEYHSETTVARAA >Mature_121_residues SEVALVADHLIIVGRGRVLADTIVRELVRQAGGDTVAVASADPARLRGLLAGPGVEITATTGSEQLSVTGMSAREIGTRA AEHGIALFELTARTVSLEDAFMALTKDAVEYHSETTVARAA
Specific function: Unknown
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12672; Mature: 12540
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVALVADHLIIVGRGRVLADTIVRELVRQAGGDTVAVASADPARLRGLLAGPGVEITA CCCHHEEECEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHEECCCCEEEEE TTGSEQLSVTGMSAREIGTRAAEHGIALFELTARTVSLEDAFMALTKDAVEYHSETTVAR ECCCCEEEEECCCHHHHHHHHHHCCEEEEEEEHHEECHHHHHHHHHHHHHHHHCCCCEEC AA CC >Mature Secondary Structure SEVALVADHLIIVGRGRVLADTIVRELVRQAGGDTVAVASADPARLRGLLAGPGVEITA CCHHEEECEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHEECCCCEEEEE TTGSEQLSVTGMSAREIGTRAAEHGIALFELTARTVSLEDAFMALTKDAVEYHSETTVAR ECCCCEEEEECCCHHHHHHHHHHCCEEEEEEEHHEECHHHHHHHHHHHHHHHHCCCCEEC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA