Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318426

Identifier: 158318426

GI number: 158318426

Start: 8129966

End: 8130553

Strand: Direct

Name: 158318426

Synonym: Franean1_6694

Alternate gene names: NA

Gene position: 8129966-8130553 (Clockwise)

Preceding gene: 158318425

Following gene: 158318427

Centisome position: 90.51

GC content: 73.64

Gene sequence:

>588_bases
ATGACCACCATCGCTGAGACCCGGCCCGTACCCGCAACGCCGTCCCGGACGGCCGGCTCCGGTCAGAAGGTGACCGGCCG
GCGGGTGCTGCGTTCCGAGTGGGCCAATCGGACGTCTGATCCTCCGGTGCTCGCGGTGAGCGGCGACGACGCGGCCGGCG
GGCTCGTGGGACATCCCGCGACCGCCCGGTTGTTCCACGCCGGACAGCGGGTCCGGCAGTGGGACACCGCACGCCCCTGG
GCGCTGGACACCGCCGTCGTGGTCGCGATCTTCCTCGCGTTCTGCCTGCCCGACCTCCCGCACGACGGGGACCCTCCGGA
CACGCCGATCCCCTTCGTCCGGCCGCCGCTGGCCGAGATGCTGCTGTTCCAGGCCGCGCTGCTCGTCCCGCTGTGGTGGC
GGCGCCGCGCCCCGCTGGCGGCATTCCACGCGGTCATGGCGGCGTTCGTCGTCGAGCTGGCCGTCGGTGTCCTGCTGCGC
GCCGACGTCGCGCTGCTGGTCGCCGTTTACAGCCTGGTGCTCCACGCGCCGCTGCGGCGCCTGCCGTGGGCGGTACCCGC
GTCGATCGCCACGTTCTGCTGCTCGTGA

Upstream 100 bases:

>100_bases
TCGAGCTCACCGCCCGGACGGTCTCCCTGGAGGATGCCTTCATGGCCCTTACCAAGGACGCCGTCGAATACCATTCCGAG
ACGACCGTGGCGAGGGCGGC

Downstream 100 bases:

>100_bases
TCCGCCTGGCCACGGTGCTGCCGGTGGGGGATGTGATCTTCCTGCTCCTCAGCGTCGGCGTCGCGGCCGCCGCGCTGGGG
TTCGCGGTGCGCATCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MTTIAETRPVPATPSRTAGSGQKVTGRRVLRSEWANRTSDPPVLAVSGDDAAGGLVGHPATARLFHAGQRVRQWDTARPW
ALDTAVVVAIFLAFCLPDLPHDGDPPDTPIPFVRPPLAEMLLFQAALLVPLWWRRRAPLAAFHAVMAAFVVELAVGVLLR
ADVALLVAVYSLVLHAPLRRLPWAVPASIATFCCS

Sequences:

>Translated_195_residues
MTTIAETRPVPATPSRTAGSGQKVTGRRVLRSEWANRTSDPPVLAVSGDDAAGGLVGHPATARLFHAGQRVRQWDTARPW
ALDTAVVVAIFLAFCLPDLPHDGDPPDTPIPFVRPPLAEMLLFQAALLVPLWWRRRAPLAAFHAVMAAFVVELAVGVLLR
ADVALLVAVYSLVLHAPLRRLPWAVPASIATFCCS
>Mature_194_residues
TTIAETRPVPATPSRTAGSGQKVTGRRVLRSEWANRTSDPPVLAVSGDDAAGGLVGHPATARLFHAGQRVRQWDTARPWA
LDTAVVVAIFLAFCLPDLPHDGDPPDTPIPFVRPPLAEMLLFQAALLVPLWWRRRAPLAAFHAVMAAFVVELAVGVLLRA
DVALLVAVYSLVLHAPLRRLPWAVPASIATFCCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20989; Mature: 20858

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIAETRPVPATPSRTAGSGQKVTGRRVLRSEWANRTSDPPVLAVSGDDAAGGLVGHPA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCH
TARLFHAGQRVRQWDTARPWALDTAVVVAIFLAFCLPDLPHDGDPPDTPIPFVRPPLAEM
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
LLFQAALLVPLWWRRRAPLAAFHAVMAAFVVELAVGVLLRADVALLVAVYSLVLHAPLRR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPWAVPASIATFCCS
CCCCCHHHHHHHHCC
>Mature Secondary Structure 
TTIAETRPVPATPSRTAGSGQKVTGRRVLRSEWANRTSDPPVLAVSGDDAAGGLVGHPA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCH
TARLFHAGQRVRQWDTARPWALDTAVVVAIFLAFCLPDLPHDGDPPDTPIPFVRPPLAEM
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
LLFQAALLVPLWWRRRAPLAAFHAVMAAFVVELAVGVLLRADVALLVAVYSLVLHAPLRR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPWAVPASIATFCCS
CCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA