| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318405
Identifier: 158318405
GI number: 158318405
Start: 8100850
End: 8101299
Strand: Direct
Name: 158318405
Synonym: Franean1_6670
Alternate gene names: NA
Gene position: 8100850-8101299 (Clockwise)
Preceding gene: 158318403
Following gene: 158318407
Centisome position: 90.19
GC content: 73.33
Gene sequence:
>450_bases ATGGCGCAGATCAGTGTCGAGGTGGAACGAATCGTCGGCGGCCCGCCGGAGCGGGTGCTGGCGCTGCTGGCCGACTACGC GGGGACGCGGGCCGAGCTGTGGCCAGAAATGATCACCGATTACAAGGTGGTCGAGGGCGGGGAGGGCCCCGGCACCCGGA TCACCTACCGGCTGCACGCCACCCGCAAGCGCGTCCGCGACGTGGACGCGGTGGTCACTGCCCCCGCCGCGGGCAGCCTG CTGGAGGCCGACCAGCGCTCCTCCCTGCGCACCCGCTGGCAGGTGCGCGCGGCCGGCGCCGGCGGCAGCACGGTAACCGC GCTGACCACCTGGGACGGCGCGAGCGGGGTCGGCGGGTTCTTCGAGAAGACCTTCGCCCCGATCGGCATCCGCAAGCTGA GCAACGCCGTCCTGGACGGACTGGAGACCCGGCTGCGCCCGCCGGCCTGA
Upstream 100 bases:
>100_bases GGCCCGGTGGGGCGGTCAACCGGATTTGTCGTGCCCGGGATAGTCTCGTTTTCGGCGGAGGTGCCGGCGCCGGCCGGGCC GAGTTTGGACGGAGTGAACG
Downstream 100 bases:
>100_bases CCAGGCGATCTCCCCACGACCGGGCTCGGGGCCGCGGCCGGGCCCGGGCTACCCGGCCTCGGCCGCCGTGCCGTCCTCGG CGGTGCCGCGGACGGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: KanY Protein; Polyketide Cyclase / Dehydrase And Lipid Transport
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAQISVEVERIVGGPPERVLALLADYAGTRAELWPEMITDYKVVEGGEGPGTRITYRLHATRKRVRDVDAVVTAPAAGSL LEADQRSSLRTRWQVRAAGAGGSTVTALTTWDGASGVGGFFEKTFAPIGIRKLSNAVLDGLETRLRPPA
Sequences:
>Translated_149_residues MAQISVEVERIVGGPPERVLALLADYAGTRAELWPEMITDYKVVEGGEGPGTRITYRLHATRKRVRDVDAVVTAPAAGSL LEADQRSSLRTRWQVRAAGAGGSTVTALTTWDGASGVGGFFEKTFAPIGIRKLSNAVLDGLETRLRPPA >Mature_148_residues AQISVEVERIVGGPPERVLALLADYAGTRAELWPEMITDYKVVEGGEGPGTRITYRLHATRKRVRDVDAVVTAPAAGSLL EADQRSSLRTRWQVRAAGAGGSTVTALTTWDGASGVGGFFEKTFAPIGIRKLSNAVLDGLETRLRPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15917; Mature: 15786
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQISVEVERIVGGPPERVLALLADYAGTRAELWPEMITDYKVVEGGEGPGTRITYRLHA CCCEEEEHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCCEEEEEEHH TRKRVRDVDAVVTAPAAGSLLEADQRSSLRTRWQVRAAGAGGSTVTALTTWDGASGVGGF HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCCCCCHH FEKTFAPIGIRKLSNAVLDGLETRLRPPA HHHHHCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQISVEVERIVGGPPERVLALLADYAGTRAELWPEMITDYKVVEGGEGPGTRITYRLHA CCEEEEHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECCCCCCCEEEEEEHH TRKRVRDVDAVVTAPAAGSLLEADQRSSLRTRWQVRAAGAGGSTVTALTTWDGASGVGGF HHHHHHHHHHHEECCCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCCCCCCHH FEKTFAPIGIRKLSNAVLDGLETRLRPPA HHHHHCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA