| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318404
Identifier: 158318404
GI number: 158318404
Start: 8099189
End: 8100610
Strand: Reverse
Name: 158318404
Synonym: Franean1_6669
Alternate gene names: NA
Gene position: 8100610-8099189 (Counterclockwise)
Preceding gene: 158318406
Following gene: 158318393
Centisome position: 90.19
GC content: 71.87
Gene sequence:
>1422_bases GTGCCAGATTCACCGCAGACTTCCGAACATTCCCGCGAACGACCGCGCCGTCCTGGCCCGGTACGGGCTTTCGGGGACAT GCTGGCATTCTTCGCCGGTGCGCAGGCGAAATTCCTCCCGCCGACGGAGCGCGCCCGTTTCGTCACGGCCGGCGCGCTGA TGCTTCTGACAGCGGCACTTGCCACCTGTGCGGGGGCGACGGTGGTGGCCCTCGGTTTCGGCATCGGGACCCTCCAGGCG CTGCCGTTCGGCATCTTCTACGCGCTGTTCATCTTCTTCATCGACCGGTCCGTCCTGCTGACCCAGACCCCGTACCGCTA TGGCGCGGACGGCGGTGTGGAAACCGGCCGGGCTGGATTCTCCGTGGCGGTCCGCGTGTTCATCGCGGTGTGCGCGGCGA TAATCGTCGGGGAGACGGTACTGCTCCGGATCTTCGAGTCCTCGATCGCGAGCCGGGTCGCCGAGATACAGCAGGAGGAC GCCGGGCACCTACTGGCCGGGTGGGACGCGAACCAGGAGAGCGAGCTCGCCGCCCGCACGGCCGATCTCGCGGCGAAACA GAAAGGCCTCGACGCCGCCGACGATCTCGTCGAGGCGAAGACGGCGGAGGTGAACTGCCAGCTCACCGGTGGCCAGTCCG GCGATGGCCAGTCCGGCGATGGCCCGGCCTGCCTGGGCGGGGCCGGCCCGGTCTACCAGATCAAGCTGGCCGAGCTGGCC GCGGCCACCGCCGCCGTCACCGACGCCACCCGGCTGCGCGACGCCGCCCAACGTGATCTTGACGAGTTTCGGGCTGCGCA GAAGGCCAGGCGCTCCGACTTCGCGGCCACGGTGCAGACCACGACGGGCGCGGCCGACGACCTGCTGATGCGGGAGAAGG CGTTCTGGCGGCTGACCACCGAGGACCGCTCCGTCCTGGTGTGGCGCCTGTTGCTGACGTTGCTCCTGCTCGGCATCGAC CTCGCCCCGCTGCTGTTCAAGCGTGGTCTGGACCGCACCTCCTACCGGCAGCGCGAGCGCCTCGAGCGCTGGCGGGACGA GACCTCCGTCGAGGTCGACGCGCTGCAGGTCGGGCACACCGCCCGCGAGCGCCGCGACCTGGCCCCGGTGGTCGCGGCGC GTCTCGCCGGGCGCTGGGAGGACTACCTGCTGCGCCGCGACAGCGTCGAGACCGCCGTGCGCTGGACGGCCGACACGGCG CAGGCGCGCCTCGCCGAGGAGGAGATCAGCGCAGACCAGGAGTCGCGGCTGCGTGAGCTGCGGCGACGGCACGGCATCGT CGCCGTGCCGCGCGTCCCGACCTCCGACGCGGAGCCGTCCACCCCGGCTGTCACCACCGGTTCGGCCGCGGCAGCCTCAG CCGCAACCGGATCGGCGGTGGCCACCGGCCCGGCGGTGCCGGCGCCGCCGGAACCGCCGTGA
Upstream 100 bases:
>100_bases GATAACGTTGCCGCGCTGCCCGGGGGTGTCACCGGCGGCGCCAGATCCGCCCGGCAAAATGCTGCGCGAATCTGTGAAGT ACCGGTTGGACGGGGGGCCT
Downstream 100 bases:
>100_bases TCAGATGTCGCCGGCGCGGCGCCGCCGCCGGCGGCGGCGGCGGCGGGCGACCAGGGCGGCCACGACGCCCAGGACCGCCG CTCCGCCCGCGGCCGAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MPDSPQTSEHSRERPRRPGPVRAFGDMLAFFAGAQAKFLPPTERARFVTAGALMLLTAALATCAGATVVALGFGIGTLQA LPFGIFYALFIFFIDRSVLLTQTPYRYGADGGVETGRAGFSVAVRVFIAVCAAIIVGETVLLRIFESSIASRVAEIQQED AGHLLAGWDANQESELAARTADLAAKQKGLDAADDLVEAKTAEVNCQLTGGQSGDGQSGDGPACLGGAGPVYQIKLAELA AATAAVTDATRLRDAAQRDLDEFRAAQKARRSDFAATVQTTTGAADDLLMREKAFWRLTTEDRSVLVWRLLLTLLLLGID LAPLLFKRGLDRTSYRQRERLERWRDETSVEVDALQVGHTARERRDLAPVVAARLAGRWEDYLLRRDSVETAVRWTADTA QARLAEEEISADQESRLRELRRRHGIVAVPRVPTSDAEPSTPAVTTGSAAAASAATGSAVATGPAVPAPPEPP
Sequences:
>Translated_473_residues MPDSPQTSEHSRERPRRPGPVRAFGDMLAFFAGAQAKFLPPTERARFVTAGALMLLTAALATCAGATVVALGFGIGTLQA LPFGIFYALFIFFIDRSVLLTQTPYRYGADGGVETGRAGFSVAVRVFIAVCAAIIVGETVLLRIFESSIASRVAEIQQED AGHLLAGWDANQESELAARTADLAAKQKGLDAADDLVEAKTAEVNCQLTGGQSGDGQSGDGPACLGGAGPVYQIKLAELA AATAAVTDATRLRDAAQRDLDEFRAAQKARRSDFAATVQTTTGAADDLLMREKAFWRLTTEDRSVLVWRLLLTLLLLGID LAPLLFKRGLDRTSYRQRERLERWRDETSVEVDALQVGHTARERRDLAPVVAARLAGRWEDYLLRRDSVETAVRWTADTA QARLAEEEISADQESRLRELRRRHGIVAVPRVPTSDAEPSTPAVTTGSAAAASAATGSAVATGPAVPAPPEPP >Mature_472_residues PDSPQTSEHSRERPRRPGPVRAFGDMLAFFAGAQAKFLPPTERARFVTAGALMLLTAALATCAGATVVALGFGIGTLQAL PFGIFYALFIFFIDRSVLLTQTPYRYGADGGVETGRAGFSVAVRVFIAVCAAIIVGETVLLRIFESSIASRVAEIQQEDA GHLLAGWDANQESELAARTADLAAKQKGLDAADDLVEAKTAEVNCQLTGGQSGDGQSGDGPACLGGAGPVYQIKLAELAA ATAAVTDATRLRDAAQRDLDEFRAAQKARRSDFAATVQTTTGAADDLLMREKAFWRLTTEDRSVLVWRLLLTLLLLGIDL APLLFKRGLDRTSYRQRERLERWRDETSVEVDALQVGHTARERRDLAPVVAARLAGRWEDYLLRRDSVETAVRWTADTAQ ARLAEEEISADQESRLRELRRRHGIVAVPRVPTSDAEPSTPAVTTGSAAAASAATGSAVATGPAVPAPPEPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50650; Mature: 50519
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSPQTSEHSRERPRRPGPVRAFGDMLAFFAGAQAKFLPPTERARFVTAGALMLLTAAL CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH ATCAGATVVALGFGIGTLQALPFGIFYALFIFFIDRSVLLTQTPYRYGADGGVETGRAGF HHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHH SVAVRVFIAVCAAIIVGETVLLRIFESSIASRVAEIQQEDAGHLLAGWDANQESELAART HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH ADLAAKQKGLDAADDLVEAKTAEVNCQLTGGQSGDGQSGDGPACLGGAGPVYQIKLAELA HHHHHHHCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEHHHHH AATAAVTDATRLRDAAQRDLDEFRAAQKARRSDFAATVQTTTGAADDLLMREKAFWRLTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHEEEEC EDRSVLVWRLLLTLLLLGIDLAPLLFKRGLDRTSYRQRERLERWRDETSVEVDALQVGHT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCHH ARERRDLAPVVAARLAGRWEDYLLRRDSVETAVRWTADTAQARLAEEEISADQESRLREL HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH RRRHGIVAVPRVPTSDAEPSTPAVTTGSAAAASAATGSAVATGPAVPAPPEPP HHHCCEEEECCCCCCCCCCCCCCEECCCHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PDSPQTSEHSRERPRRPGPVRAFGDMLAFFAGAQAKFLPPTERARFVTAGALMLLTAAL CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH ATCAGATVVALGFGIGTLQALPFGIFYALFIFFIDRSVLLTQTPYRYGADGGVETGRAGF HHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHH SVAVRVFIAVCAAIIVGETVLLRIFESSIASRVAEIQQEDAGHLLAGWDANQESELAART HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH ADLAAKQKGLDAADDLVEAKTAEVNCQLTGGQSGDGQSGDGPACLGGAGPVYQIKLAELA HHHHHHHCCCCHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEHHHHH AATAAVTDATRLRDAAQRDLDEFRAAQKARRSDFAATVQTTTGAADDLLMREKAFWRLTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHEEEEC EDRSVLVWRLLLTLLLLGIDLAPLLFKRGLDRTSYRQRERLERWRDETSVEVDALQVGHT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCHH ARERRDLAPVVAARLAGRWEDYLLRRDSVETAVRWTADTAQARLAEEEISADQESRLREL HHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH RRRHGIVAVPRVPTSDAEPSTPAVTTGSAAAASAATGSAVATGPAVPAPPEPP HHHCCEEEECCCCCCCCCCCCCCEECCCHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA