| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318406
Identifier: 158318406
GI number: 158318406
Start: 8101348
End: 8102421
Strand: Reverse
Name: 158318406
Synonym: Franean1_6671
Alternate gene names: NA
Gene position: 8102421-8101348 (Counterclockwise)
Preceding gene: 158318408
Following gene: 158318404
Centisome position: 90.21
GC content: 75.23
Gene sequence:
>1074_bases GTGAGGGACGCCCACGGGCCGGAAGTCGGTCCAGCCGTGGCATTCGTTCACGAGGCGCTCGTCCACCGCGGCCCGGCCGG TTTCCTGGCCGGCGCGGTGGAATTCGTCCGGGCCGGTGTCCAGCGTGACGAGGCCGTCCTGGTCGCGGTCACGCCCGCCA ACGCCGGGCTGCTGCGGTCCGTGCTGGGCTCGATCGTGTCGAAGATCTCCTTCCTGGACATCACCGAATTCGGGCGAAAT CCGGGCCGGGTCATTCCGGCCTGGTCGGTCTTTCTGGACGAGGCCCGGGCCCGGGGAACCCGCGCACGTGGCCTCGGCGA GCTGGTCTGGGCCGGGCGGAGCCCGGCGGAGATAGCCGAGTGCCACCACTGCGAATCACTGGCCAATCTGGCCTTCGGGG CATCATCCGGGCTGCGGCTACGCTGCGCCTACGACGCGGCCACGCTACCGGCACCGGTGGTGGACGCCGCGTGGCGGACC CATCCGCGAGTGCTGGGCGACGGCGCGGCCCGCGGCGGTGCCCCGTACCGCGCCGCACCCGACCCGCTGCTCGGCCGCAC CCGGGCACCGGCGTCCGCGCCGCTGGGGCCGGGGGTGCCGGAGGCGTTCGAGATGGGGCTGCCGGCGCCCGCAGTGGCCG GCCGGGCGGTCGTCAGCCTGCGCTTCACCGGGCGGGACGTGTCTGCCGCGCGGCGCGTGGCGGTCGGCCGGGCCCGAGAG GTCGGCGTGCCCGACAGCCGGGTCGACGACCTGAGGCTGGCCATCCACGAGATCGTCACCAACAGCGTGCGTCACGGCGG CGGGATCGGCCGGCTGCGCATCTGGGTGGAGGGGCCGACCCTGATCTGCGAGGTCGCCGACCGCGGCCGGGTGCTCGACC CGCTGGTCGGCCAGCGGATCCCGGAGCTGGACTCCGAGGGCGGCCGGGGGCTGTGGCTGGCCCATCAGCTCTGTGACCTC GTCCAGCTCCGCTCCTCGCCGGTCGGCACCGTGGTCCGCCTGCATATCGCGATCCGGGGCGCGGCGCCCGTCCGCGGCAC CGCCGAGGACGGCACGGCGGCCGAGGCCGGGTAG
Upstream 100 bases:
>100_bases GCTCACGACGTCGCAGCTCGGGCCGGGGGGACCTGGAGCCGCGATGACGGCGCCCCGGCGGCGGTCCGGGTCATGATTGA TCGAATTCGGGGGGGACACC
Downstream 100 bases:
>100_bases CCCGGGCCCGGCCGCGGCCCCGAGCCCGGTCGTGGGGAGATCGCCTGGTCAGGCCGGCGGGCGCAGCCGGGTCTCCAGTC CGTCCAGGACGGCGTTGCTC
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MRDAHGPEVGPAVAFVHEALVHRGPAGFLAGAVEFVRAGVQRDEAVLVAVTPANAGLLRSVLGSIVSKISFLDITEFGRN PGRVIPAWSVFLDEARARGTRARGLGELVWAGRSPAEIAECHHCESLANLAFGASSGLRLRCAYDAATLPAPVVDAAWRT HPRVLGDGAARGGAPYRAAPDPLLGRTRAPASAPLGPGVPEAFEMGLPAPAVAGRAVVSLRFTGRDVSAARRVAVGRARE VGVPDSRVDDLRLAIHEIVTNSVRHGGGIGRLRIWVEGPTLICEVADRGRVLDPLVGQRIPELDSEGGRGLWLAHQLCDL VQLRSSPVGTVVRLHIAIRGAAPVRGTAEDGTAAEAG
Sequences:
>Translated_357_residues MRDAHGPEVGPAVAFVHEALVHRGPAGFLAGAVEFVRAGVQRDEAVLVAVTPANAGLLRSVLGSIVSKISFLDITEFGRN PGRVIPAWSVFLDEARARGTRARGLGELVWAGRSPAEIAECHHCESLANLAFGASSGLRLRCAYDAATLPAPVVDAAWRT HPRVLGDGAARGGAPYRAAPDPLLGRTRAPASAPLGPGVPEAFEMGLPAPAVAGRAVVSLRFTGRDVSAARRVAVGRARE VGVPDSRVDDLRLAIHEIVTNSVRHGGGIGRLRIWVEGPTLICEVADRGRVLDPLVGQRIPELDSEGGRGLWLAHQLCDL VQLRSSPVGTVVRLHIAIRGAAPVRGTAEDGTAAEAG >Mature_357_residues MRDAHGPEVGPAVAFVHEALVHRGPAGFLAGAVEFVRAGVQRDEAVLVAVTPANAGLLRSVLGSIVSKISFLDITEFGRN PGRVIPAWSVFLDEARARGTRARGLGELVWAGRSPAEIAECHHCESLANLAFGASSGLRLRCAYDAATLPAPVVDAAWRT HPRVLGDGAARGGAPYRAAPDPLLGRTRAPASAPLGPGVPEAFEMGLPAPAVAGRAVVSLRFTGRDVSAARRVAVGRARE VGVPDSRVDDLRLAIHEIVTNSVRHGGGIGRLRIWVEGPTLICEVADRGRVLDPLVGQRIPELDSEGGRGLWLAHQLCDL VQLRSSPVGTVVRLHIAIRGAAPVRGTAEDGTAAEAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37302; Mature: 37302
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDAHGPEVGPAVAFVHEALVHRGPAGFLAGAVEFVRAGVQRDEAVLVAVTPANAGLLRS CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH VLGSIVSKISFLDITEFGRNPGRVIPAWSVFLDEARARGTRARGLGELVWAGRSPAEIAE HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHCCCHHHHCCCCCHHHHHH CHHCESLANLAFGASSGLRLRCAYDAATLPAPVVDAAWRTHPRVLGDGAARGGAPYRAAP HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCC DPLLGRTRAPASAPLGPGVPEAFEMGLPAPAVAGRAVVSLRFTGRDVSAARRVAVGRARE CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCEEEEEEECCCCHHHHHHHHHCCHHC VGVPDSRVDDLRLAIHEIVTNSVRHGGGIGRLRIWVEGPTLICEVADRGRVLDPLVGQRI CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECCCCCCCCHHHHCCC PELDSEGGRGLWLAHQLCDLVQLRSSPVGTVVRLHIAIRGAAPVRGTAEDGTAAEAG CCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRDAHGPEVGPAVAFVHEALVHRGPAGFLAGAVEFVRAGVQRDEAVLVAVTPANAGLLRS CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH VLGSIVSKISFLDITEFGRNPGRVIPAWSVFLDEARARGTRARGLGELVWAGRSPAEIAE HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHCCCHHHHCCCCCHHHHHH CHHCESLANLAFGASSGLRLRCAYDAATLPAPVVDAAWRTHPRVLGDGAARGGAPYRAAP HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCC DPLLGRTRAPASAPLGPGVPEAFEMGLPAPAVAGRAVVSLRFTGRDVSAARRVAVGRARE CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHCCCEEEEEEECCCCHHHHHHHHHCCHHC VGVPDSRVDDLRLAIHEIVTNSVRHGGGIGRLRIWVEGPTLICEVADRGRVLDPLVGQRI CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEEEEECCCCCCCCHHHHCCC PELDSEGGRGLWLAHQLCDLVQLRSSPVGTVVRLHIAIRGAAPVRGTAEDGTAAEAG CCCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA