Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is pimA [H]

Identifier: 158318400

GI number: 158318400

Start: 8095408

End: 8096709

Strand: Direct

Name: pimA [H]

Synonym: Franean1_6665

Alternate gene names: 158318400

Gene position: 8095408-8096709 (Clockwise)

Preceding gene: 158318399

Following gene: 158318401

Centisome position: 90.13

GC content: 74.73

Gene sequence:

>1302_bases
GTGACGGTGAACGGGGGCGACGGTGAAGCCCCGGTGAGCGGGGGCACGGCAGGCGGGAGCTCGGCGGGCGGCCCGCTCTC
AGTGGCGTTGCTGACCTATTCCACCCGGCCCCGCGGCGGGGTGGTGGCCACCCTCGCGCTGGCCGAGGCGCTGGCGCGCG
CCGGGCACCGCGTCAGCCTGTGGACGCTGGCCCGCGGCGGGGACGCCGGCTTCTTCCGCCCGGTCGACCCGGCGGTCGAG
GTGGTGGCGGTGCCGTTCCCGGAGGTCGCCGACGAGACGGTCGGGAAGCGCATTATACGCTCGATCGCCATCCTCCGGGA
TGCCTTAGAGGCGTTTCCCGGCGGGTACGACATCGTGCACGCCCAGGACTGCATCGCCGCGAACGCCGTGGCCGACTGCG
TCCGCACTGTCCACCACCTGGACACCTTCACCACCCCCGAGCTCGTCGCCTGCCATGAGCGGGCGCTGCGCCGGCCGTAC
GCGCACGTGTGCGTGTCGGCGGCCGTCGCGGTCGAGCTGGCCGCCGGCTGGGGGATCACCGCGACGGTGATCCCGAACGG
CGTCGACGCGGCCCGCTTCACCGCGGCTGCCGGCCCGGAGGCTCCCGCCCGCGAGGCCCGCGGGCGCTGGCGTGCCCGGC
TCGGCCGGTACGTGCTCGCCGTCGGCGGGATCGAGCCGCGTAAGGGGACCGCCGACCTGGTCGAGGCGTTCGCGCTGCTG
CGGGAGCGGGTGACGCCGGTTTCCCTCGTCGTCGCCGGTGGGGAGACCCTGTTCGACTACCGCGGGTACCGCGAGCAGGT
GCTGGGCCGGGCCGCGCAACTCGGCGTCGAGCCCGTCATCCTCGGGCCGGTGGCCCACGAGGAGCTGCCCGCCCTGGTCG
CGGCGGCGGACGTCTTCGCGTTCCCGTCCGCGAAGGAGGGGTTCGGGCTGGCCGCGCTGGAGGCGCTGGCCGCGGGTGTC
CCGGTCGTCACCCGTGACCTGCCGGTGCTACGCGAGGTGCTGGCCGCGGCCGGGGACGCGGTGTGCTTCGCCTCGACGCC
GACCGAGTTCGCGGCCGCGCTGGAGGCGTTCCTCGACTCCGCGCAACGGCGGCCGGCCGCGGGCGCCGAGCAGCCGCAGG
CGGGAGCGGGCGCCGGACATCCGCGGGTGGCGGCCGGGCGGGCAGTCGCGCGAGGGTACAGCTGGGCGACCGCGGCCGAC
CGGCATGTCGCCCTTTACCGCGAACTGATCAGAACACAGGTCACCGGACGGCCGACGCGCCGAATCAGCGTCACCACAGA
TAAATCATCCATCTCATTGTAA

Upstream 100 bases:

>100_bases
GCGGCCCGCGGGCGTGCCCGGGCCGAGCCACGACGACCTGGTCGGGCTGGCCACCGACGCGCTCGCCCGGGTCGGTGCCC
CGGAGCCCCGGTGAGCGGGG

Downstream 100 bases:

>100_bases
GAACTTAATGACGGAAAGCGACACACCCGGCCCGGATCCGGTCCGGACGGTCCCACAGGGTGCCGAATCGACTCTGCTCC
GTCCGCCACGGCGAGTCGGA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: Alpha-mannosyltransferase; Guanosine diphosphomannose-phosphatidyl-inositol alpha-mannosyltransferase; Phosphatidylinositol alpha-mannosyltransferase; PI alpha-mannosyltransferase [H]

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MTVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSLWTLARGGDAGFFRPVDPAVE
VVAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVHAQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPY
AHVCVSAAVAVELAAGWGITATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALL
RERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFAFPSAKEGFGLAALEALAAGV
PVVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDSAQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAAD
RHVALYRELIRTQVTGRPTRRISVTTDKSSISL

Sequences:

>Translated_433_residues
MTVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSLWTLARGGDAGFFRPVDPAVE
VVAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVHAQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPY
AHVCVSAAVAVELAAGWGITATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALL
RERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFAFPSAKEGFGLAALEALAAGV
PVVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDSAQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAAD
RHVALYRELIRTQVTGRPTRRISVTTDKSSISL
>Mature_432_residues
TVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSLWTLARGGDAGFFRPVDPAVEV
VAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVHAQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPYA
HVCVSAAVAVELAAGWGITATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALLR
ERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFAFPSAKEGFGLAALEALAAGVP
VVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDSAQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAADR
HVALYRELIRTQVTGRPTRRISVTTDKSSISL

Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Contrary to pimB, the mannosyltransferase pim

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.57 [H]

Molecular weight: Translated: 44813; Mature: 44682

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSL
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE
WTLARGGDAGFFRPVDPAVEVVAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVH
EEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
AQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPYAHVCVSAAVAVELAAGWGIT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEE
ATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALL
EEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHH
RERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFA
HHCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHC
FPSAKEGFGLAALEALAAGVPVVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDS
CCCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
AQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAADRHVALYRELIRTQVTGRPTR
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
RISVTTDKSSISL
EEEEEECCCCCCC
>Mature Secondary Structure 
TVNGGDGEAPVSGGTAGGSSAGGPLSVALLTYSTRPRGGVVATLALAEALARAGHRVSL
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE
WTLARGGDAGFFRPVDPAVEVVAVPFPEVADETVGKRIIRSIAILRDALEAFPGGYDIVH
EEEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
AQDCIAANAVADCVRTVHHLDTFTTPELVACHERALRRPYAHVCVSAAVAVELAAGWGIT
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEE
ATVIPNGVDAARFTAAAGPEAPAREARGRWRARLGRYVLAVGGIEPRKGTADLVEAFALL
EEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHH
RERVTPVSLVVAGGETLFDYRGYREQVLGRAAQLGVEPVILGPVAHEELPALVAAADVFA
HHCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHC
FPSAKEGFGLAALEALAAGVPVVTRDLPVLREVLAAAGDAVCFASTPTEFAAALEAFLDS
CCCCCCCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHH
AQRRPAAGAEQPQAGAGAGHPRVAAGRAVARGYSWATAADRHVALYRELIRTQVTGRPTR
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
RISVTTDKSSISL
EEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12068013 [H]