| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318399
Identifier: 158318399
GI number: 158318399
Start: 8093845
End: 8095401
Strand: Direct
Name: 158318399
Synonym: Franean1_6664
Alternate gene names: NA
Gene position: 8093845-8095401 (Clockwise)
Preceding gene: 158318398
Following gene: 158318400
Centisome position: 90.11
GC content: 77.39
Gene sequence:
>1557_bases ATGCCCGACGCGATCATCATCGGCGCGGGGCCGGCCGGCCTGACCGCGGGCCTGCTGCTCGCGCGCCGCGGCTGGCGGGT CGACGTGCTCGAACGGGACGTCGACGACCGGCCCGGCGACCTGGCCGGCATCGACGACTGGCGCCGGCCGGGCGCGACGC AGACCTGGCACTCGCACGCCTTCCTGGCCCGCTGCCGGTCGCTGCTGGCCGAGCACGCCCCGGACGTCCTCGCCGCGCTG CGCGCCGCGGGCGCGCTCGAGGTCCGGCTCGCCGAGCACGCGCCGCCGACGCTGACCGGCCCCGCTCCGGCCGACGACGA GCTCGTCGTCCTCGGGTGCCGGCGGGCGGTGCTGGACTGGGTGCTGCGCGAGGTCGTCGCCACGCAGCCCGGTGTGACCG TTCGCTCGGGGACACGCGTCGTCGGCCTGCGCATCGAAACCGATCCCGCCCCGGCGGGGCCCGCGTTCTCGCGCGGGCCG GTGCGGGTCCGTGGCGTGCGGTTGGCTGACGGCTCCAGCCGTGACGCCGACCTCGTCGTCGACGCCGCGGGGCGGCTCTC GCCCGTGCGACGGTGGCTGGCCGACGCGGGCGCCGACCTGCCGGCGCCGGCCGAGGCCGACTGCGGCATCGCCTACTACT CGCGCTACTACCGGCGTAGCGGCCCAGCGCCGGACATCGCGCTCAACCGCGGTCACACCACCGGCGCCTCCTTCGACCGC TACTCCTGCCTGATGTTCCCAGCCGACGGCGACAGTTTCTCGATGACCTTCGGCGTGCTCCCCGAGGACACCGGCATCCG GGTGCTTCGGCACGGCGCGGCGTTCGACGCGGCGGTGCGGTCCATCGAGATGTTCGTCCCGTGGCTGGACCCCGGGAACG TGCGGCCGATCTCGCCGGTCACCGCGATGTCGCACCTGACCAACCGGCTGCGGCCGCTGGTCGCGGACGGGCGTCCGGGC GTGCTCGGGCTGCTGGCGATCGGCGACGCGGCGGTCATCACCAATCCCGCGCACACCCGCGGGGTCTCGCTCGCCGTGCT CGGCGCCGTCCGGCTGGTGGAGGTCGCGAACGGGCTGCGTGACCCCGCCGAGCGGGCGCTCGCCCTGGACGAGTCGATGC GGGCGGAGCTCGCGCCGTGGTTCGAGGACTCGTGCGCCCAGGACGCGGCCCGGCTGCTGCGCTGGCGTCCCGAGCAGCCG GTCGTGCCGCAGGCGCGGGGTGCCGAGCCCGCCGAGGGCGCGCCGCCGACCGGCTACACGCCCTGGCCGGCGGCCCCGGC CGGCGGTGCGGGCGCCGCGCGGCCGGCCGGCGTCACGAACGGCGAGGCCTACCTCGCCGCGCGCCGCGACCCGGAGATCT GGCACCGGTTCACCCGGCTGCAGAACCTGCTCGCCACCCCGTCCGACGTGCTGGGCGAGTCGGGGTTCGCCGCGCGGGTC CGCGAGATCCTGGCGACGGGCTGGCGGCCCGCGGGCGTGCCCGGGCCGAGCCACGACGACCTGGTCGGGCTGGCCACCGA CGCGCTCGCCCGGGTCGGTGCCCCGGAGCCCCGGTGA
Upstream 100 bases:
>100_bases GTAAGCCCTACGACCCGCGGCGGGCCGCCCGCCCGGCGGCCCCCCGGCCCACGGCCGAGCACGGATCTCGCCCGTCCCGG CCCGCGGGACCGGCGCACTG
Downstream 100 bases:
>100_bases GCGGGGGTGACGGTGAACGGGGGCGACGGTGAAGCCCCGGTGAGCGGGGGCACGGCAGGCGGGAGCTCGGCGGGCGGCCC GCTCTCAGTGGCGTTGCTGA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NADPH-Dependent Glutamate Synthase Beta Chain; FAD-Dependent Oxidoreductase; Dehydrogenase Signal Peptide; Signal Peptide Protein
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MPDAIIIGAGPAGLTAGLLLARRGWRVDVLERDVDDRPGDLAGIDDWRRPGATQTWHSHAFLARCRSLLAEHAPDVLAAL RAAGALEVRLAEHAPPTLTGPAPADDELVVLGCRRAVLDWVLREVVATQPGVTVRSGTRVVGLRIETDPAPAGPAFSRGP VRVRGVRLADGSSRDADLVVDAAGRLSPVRRWLADAGADLPAPAEADCGIAYYSRYYRRSGPAPDIALNRGHTTGASFDR YSCLMFPADGDSFSMTFGVLPEDTGIRVLRHGAAFDAAVRSIEMFVPWLDPGNVRPISPVTAMSHLTNRLRPLVADGRPG VLGLLAIGDAAVITNPAHTRGVSLAVLGAVRLVEVANGLRDPAERALALDESMRAELAPWFEDSCAQDAARLLRWRPEQP VVPQARGAEPAEGAPPTGYTPWPAAPAGGAGAARPAGVTNGEAYLAARRDPEIWHRFTRLQNLLATPSDVLGESGFAARV REILATGWRPAGVPGPSHDDLVGLATDALARVGAPEPR
Sequences:
>Translated_518_residues MPDAIIIGAGPAGLTAGLLLARRGWRVDVLERDVDDRPGDLAGIDDWRRPGATQTWHSHAFLARCRSLLAEHAPDVLAAL RAAGALEVRLAEHAPPTLTGPAPADDELVVLGCRRAVLDWVLREVVATQPGVTVRSGTRVVGLRIETDPAPAGPAFSRGP VRVRGVRLADGSSRDADLVVDAAGRLSPVRRWLADAGADLPAPAEADCGIAYYSRYYRRSGPAPDIALNRGHTTGASFDR YSCLMFPADGDSFSMTFGVLPEDTGIRVLRHGAAFDAAVRSIEMFVPWLDPGNVRPISPVTAMSHLTNRLRPLVADGRPG VLGLLAIGDAAVITNPAHTRGVSLAVLGAVRLVEVANGLRDPAERALALDESMRAELAPWFEDSCAQDAARLLRWRPEQP VVPQARGAEPAEGAPPTGYTPWPAAPAGGAGAARPAGVTNGEAYLAARRDPEIWHRFTRLQNLLATPSDVLGESGFAARV REILATGWRPAGVPGPSHDDLVGLATDALARVGAPEPR >Mature_517_residues PDAIIIGAGPAGLTAGLLLARRGWRVDVLERDVDDRPGDLAGIDDWRRPGATQTWHSHAFLARCRSLLAEHAPDVLAALR AAGALEVRLAEHAPPTLTGPAPADDELVVLGCRRAVLDWVLREVVATQPGVTVRSGTRVVGLRIETDPAPAGPAFSRGPV RVRGVRLADGSSRDADLVVDAAGRLSPVRRWLADAGADLPAPAEADCGIAYYSRYYRRSGPAPDIALNRGHTTGASFDRY SCLMFPADGDSFSMTFGVLPEDTGIRVLRHGAAFDAAVRSIEMFVPWLDPGNVRPISPVTAMSHLTNRLRPLVADGRPGV LGLLAIGDAAVITNPAHTRGVSLAVLGAVRLVEVANGLRDPAERALALDESMRAELAPWFEDSCAQDAARLLRWRPEQPV VPQARGAEPAEGAPPTGYTPWPAAPAGGAGAARPAGVTNGEAYLAARRDPEIWHRFTRLQNLLATPSDVLGESGFAARVR EILATGWRPAGVPGPSHDDLVGLATDALARVGAPEPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54791; Mature: 54659
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDAIIIGAGPAGLTAGLLLARRGWRVDVLERDVDDRPGDLAGIDDWRRPGATQTWHSHA CCCEEEEECCHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHH FLARCRSLLAEHAPDVLAALRAAGALEVRLAEHAPPTLTGPAPADDELVVLGCRRAVLDW HHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHH VLREVVATQPGVTVRSGTRVVGLRIETDPAPAGPAFSRGPVRVRGVRLADGSSRDADLVV HHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEE DAAGRLSPVRRWLADAGADLPAPAEADCGIAYYSRYYRRSGPAPDIALNRGHTTGASFDR ECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC YSCLMFPADGDSFSMTFGVLPEDTGIRVLRHGAAFDAAVRSIEMFVPWLDPGNVRPISPV EEEEEEECCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHEEEECCCCCCCCCCHH TAMSHLTNRLRPLVADGRPGVLGLLAIGDAAVITNPAHTRGVSLAVLGAVRLVEVANGLR HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCHHCCCHHHHHHHHHHHHHHHCCC DPAERALALDESMRAELAPWFEDSCAQDAARLLRWRPEQPVVPQARGAEPAEGAPPTGYT CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PWPAAPAGGAGAARPAGVTNGEAYLAARRDPEIWHRFTRLQNLLATPSDVLGESGFAARV CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHH REILATGWRPAGVPGPSHDDLVGLATDALARVGAPEPR HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PDAIIIGAGPAGLTAGLLLARRGWRVDVLERDVDDRPGDLAGIDDWRRPGATQTWHSHA CCEEEEECCHHHHHHHHHHHCCCCEEEHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHH FLARCRSLLAEHAPDVLAALRAAGALEVRLAEHAPPTLTGPAPADDELVVLGCRRAVLDW HHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHH VLREVVATQPGVTVRSGTRVVGLRIETDPAPAGPAFSRGPVRVRGVRLADGSSRDADLVV HHHHHHHCCCCCEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEE DAAGRLSPVRRWLADAGADLPAPAEADCGIAYYSRYYRRSGPAPDIALNRGHTTGASFDR ECCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC YSCLMFPADGDSFSMTFGVLPEDTGIRVLRHGAAFDAAVRSIEMFVPWLDPGNVRPISPV EEEEEEECCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHEEEECCCCCCCCCCHH TAMSHLTNRLRPLVADGRPGVLGLLAIGDAAVITNPAHTRGVSLAVLGAVRLVEVANGLR HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCHHCCCHHHHHHHHHHHHHHHCCC DPAERALALDESMRAELAPWFEDSCAQDAARLLRWRPEQPVVPQARGAEPAEGAPPTGYT CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC PWPAAPAGGAGAARPAGVTNGEAYLAARRDPEIWHRFTRLQNLLATPSDVLGESGFAARV CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCHHHHCCCCHHHHH REILATGWRPAGVPGPSHDDLVGLATDALARVGAPEPR HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA