| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318397
Identifier: 158318397
GI number: 158318397
Start: 8091387
End: 8092847
Strand: Direct
Name: 158318397
Synonym: Franean1_6662
Alternate gene names: NA
Gene position: 8091387-8092847 (Clockwise)
Preceding gene: 158318396
Following gene: 158318398
Centisome position: 90.08
GC content: 76.52
Gene sequence:
>1461_bases ATGTCCAGTCTGCTGTCGGGGGGGCACACGCCGATCCGGCACCGCACCGTGGACACACTGGCGATCTGGGGTGATCGCCG GACGCTGGCGGGCCAGCCGCCGTACCGCGTCGAGCAGGCCGAGGATCTGGCCACCTTCACCGCCTACGCCCGTCTGCGGC GGGAGGTCTTCGTCGACGAGCAGGGCCTGTTCTCCGCGACCGTGGCCGGCGATCTGGACGAGGTCGACAGCGACCCGCGC AGCATCGTCCTGGTCGCCCGGGTCGTCGGCGGGCCGGATGACGGCACGGTGATCGGCGGGGTGCGGTTGGCGCCGATCTG GCGCGGCGAGGACATCGGCGCCTGGCAGGGCGGCCGGCTCGTCGTCGCGGCAGCCGCCCGCGGGCGCTACGCGGGGATCG GTGCCGCACTGGTCCGGGCGGCGTGCGCGCGCGCCGAGAACGAGGGGGTGCTGCGCTTCGACGCCGCGGTGCAGCCCGAC CGCGCCCGCTTCTTCGGCCGGCTCGGCTGGATGATCGCCGGGACGACCACGGTCGCCGGCCGCCCGCACGTGCTCATGCG CTGGCCCATCAACCGGCTGGCGGCGGTGGCGGCCTCGATCAAGGCCCCGCTGGCGACCCTGCTGGCCGGGATGCGCCCCG GCGGCCCCGGGTTCGTCGGTGACGACGGGGCACCGGTGCCCGGCACGGACGTCGTCGCGGCCTGCGACGCGATCGTGCCG TCGATGGTCGAACGCGACCCCTACTGGGCCGGCTGGTGCGGCGTGCTGGTCAACCTCAACGATCTGGCGGCGATGGGCGC CCGGCCGGTGGGCATGCTCGACGCGGTGGCCGGCCCGACGGCGTCCCGGGTCGCCCGGGTGATCGGCGGGCTGCGGGCGG CGGCGGAGCGCTACGGCGTGCCCATCCTGGGCGGCCACACCCAGCTCGGGGTGGCGGCCGCGCTGTCGGTGACGGCGCTG GGCCGCTCCGAACGCCCGATCCCCGCCGGCGGCGGCCTGCCGGGGCACGCGGTGACCCTGACCGCCGACCTGGGCGGTGA CTGGCGCCCGGGGTACTCCGGCCGGCAGTGGGACTCGACGTCCAACCGCCGGACGGCGGAGCTGCGCGCGCTGCTGGACC TGCCGCGCCGGCACCGCCCGTGCGCGGCGAAGGACGTCAGCATGGTCGGGATCGTCGGCACGCTCGGCATGCTCGCCGAG GCGAGCGGGTGCGCCGCCGAGCTGGACGTGGCCGCGGTCCCCCGGCCGGCGGGCGCCACCGTCGGCGACTGGCTCACCTG CTTCCCCGGTTACGCAATGCTCACCGCCGACGTCGACGACCGCCCCGTTCCCGCGCCGAGCCCGGCGACGTCGCAGCGCT GCGGCCGGCTACTCAACGGGACGGGAGTGACCCTGCGCTGGCCGGACGGTGTGCTGACCCCGGCGCTGTCCGGCCATGTG ACGGGGCTGGGCCACGCGTGA
Upstream 100 bases:
>100_bases CCGAGCTGCGCGCGGCCGGCATGCGCGGCGCGGACCAGGGCGCGGGCTGCGCGGCCTGCGGGGCGTGCTCGGCCCTGCCC CAGGCCGGGGGGTGATCGTG
Downstream 100 bases:
>100_bases GCGCGGACCGCGGGGACGGCGCGCGTGGGGGGCCGGAGCCGGCCTCCCACGCGGTGACGATCGCCGCGGTGACCGCGCCG TTCACCCGTGACCTGGACGA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MSSLLSGGHTPIRHRTVDTLAIWGDRRTLAGQPPYRVEQAEDLATFTAYARLRREVFVDEQGLFSATVAGDLDEVDSDPR SIVLVARVVGGPDDGTVIGGVRLAPIWRGEDIGAWQGGRLVVAAAARGRYAGIGAALVRAACARAENEGVLRFDAAVQPD RARFFGRLGWMIAGTTTVAGRPHVLMRWPINRLAAVAASIKAPLATLLAGMRPGGPGFVGDDGAPVPGTDVVAACDAIVP SMVERDPYWAGWCGVLVNLNDLAAMGARPVGMLDAVAGPTASRVARVIGGLRAAAERYGVPILGGHTQLGVAAALSVTAL GRSERPIPAGGGLPGHAVTLTADLGGDWRPGYSGRQWDSTSNRRTAELRALLDLPRRHRPCAAKDVSMVGIVGTLGMLAE ASGCAAELDVAAVPRPAGATVGDWLTCFPGYAMLTADVDDRPVPAPSPATSQRCGRLLNGTGVTLRWPDGVLTPALSGHV TGLGHA
Sequences:
>Translated_486_residues MSSLLSGGHTPIRHRTVDTLAIWGDRRTLAGQPPYRVEQAEDLATFTAYARLRREVFVDEQGLFSATVAGDLDEVDSDPR SIVLVARVVGGPDDGTVIGGVRLAPIWRGEDIGAWQGGRLVVAAAARGRYAGIGAALVRAACARAENEGVLRFDAAVQPD RARFFGRLGWMIAGTTTVAGRPHVLMRWPINRLAAVAASIKAPLATLLAGMRPGGPGFVGDDGAPVPGTDVVAACDAIVP SMVERDPYWAGWCGVLVNLNDLAAMGARPVGMLDAVAGPTASRVARVIGGLRAAAERYGVPILGGHTQLGVAAALSVTAL GRSERPIPAGGGLPGHAVTLTADLGGDWRPGYSGRQWDSTSNRRTAELRALLDLPRRHRPCAAKDVSMVGIVGTLGMLAE ASGCAAELDVAAVPRPAGATVGDWLTCFPGYAMLTADVDDRPVPAPSPATSQRCGRLLNGTGVTLRWPDGVLTPALSGHV TGLGHA >Mature_485_residues SSLLSGGHTPIRHRTVDTLAIWGDRRTLAGQPPYRVEQAEDLATFTAYARLRREVFVDEQGLFSATVAGDLDEVDSDPRS IVLVARVVGGPDDGTVIGGVRLAPIWRGEDIGAWQGGRLVVAAAARGRYAGIGAALVRAACARAENEGVLRFDAAVQPDR ARFFGRLGWMIAGTTTVAGRPHVLMRWPINRLAAVAASIKAPLATLLAGMRPGGPGFVGDDGAPVPGTDVVAACDAIVPS MVERDPYWAGWCGVLVNLNDLAAMGARPVGMLDAVAGPTASRVARVIGGLRAAAERYGVPILGGHTQLGVAAALSVTALG RSERPIPAGGGLPGHAVTLTADLGGDWRPGYSGRQWDSTSNRRTAELRALLDLPRRHRPCAAKDVSMVGIVGTLGMLAEA SGCAAELDVAAVPRPAGATVGDWLTCFPGYAMLTADVDDRPVPAPSPATSQRCGRLLNGTGVTLRWPDGVLTPALSGHVT GLGHA
Specific function: Unknown
COG id: COG2144
COG function: function code R; Selenophosphate synthetase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0640 and MJ0799 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR011413 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: NA
Molecular weight: Translated: 50405; Mature: 50274
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLLSGGHTPIRHRTVDTLAIWGDRRTLAGQPPYRVEQAEDLATFTAYARLRREVFVDE CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC QGLFSATVAGDLDEVDSDPRSIVLVARVVGGPDDGTVIGGVRLAPIWRGEDIGAWQGGRL CCCEEEECCCCHHHHCCCCCEEEEEEEEECCCCCCEEECCEEEEEEECCCCCCCCCCCEE VVAAAARGRYAGIGAALVRAACARAENEGVLRFDAAVQPDRARFFGRLGWMIAGTTTVAG EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCEEEECCEEECC RPHVLMRWPINRLAAVAASIKAPLATLLAGMRPGGPGFVGDDGAPVPGTDVVAACDAIVP CCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SMVERDPYWAGWCGVLVNLNDLAAMGARPVGMLDAVAGPTASRVARVIGGLRAAAERYGV HHHHCCCCCEEHHHHEEECHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PILGGHTQLGVAAALSVTALGRSERPIPAGGGLPGHAVTLTADLGGDWRPGYSGRQWDST CEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC SNRRTAELRALLDLPRRHRPCAAKDVSMVGIVGTLGMLAEASGCAAELDVAAVPRPAGAT CCCHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCEEECCCCCCCC VGDWLTCFPGYAMLTADVDDRPVPAPSPATSQRCGRLLNGTGVTLRWPDGVLTPALSGHV HHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCC TGLGHA CCCCCC >Mature Secondary Structure SSLLSGGHTPIRHRTVDTLAIWGDRRTLAGQPPYRVEQAEDLATFTAYARLRREVFVDE CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC QGLFSATVAGDLDEVDSDPRSIVLVARVVGGPDDGTVIGGVRLAPIWRGEDIGAWQGGRL CCCEEEECCCCHHHHCCCCCEEEEEEEEECCCCCCEEECCEEEEEEECCCCCCCCCCCEE VVAAAARGRYAGIGAALVRAACARAENEGVLRFDAAVQPDRARFFGRLGWMIAGTTTVAG EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCEEEECCEEECC RPHVLMRWPINRLAAVAASIKAPLATLLAGMRPGGPGFVGDDGAPVPGTDVVAACDAIVP CCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SMVERDPYWAGWCGVLVNLNDLAAMGARPVGMLDAVAGPTASRVARVIGGLRAAAERYGV HHHHCCCCCEEHHHHEEECHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PILGGHTQLGVAAALSVTALGRSERPIPAGGGLPGHAVTLTADLGGDWRPGYSGRQWDST CEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC SNRRTAELRALLDLPRRHRPCAAKDVSMVGIVGTLGMLAEASGCAAELDVAAVPRPAGAT CCCHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCEEECCCCCCCC VGDWLTCFPGYAMLTADVDDRPVPAPSPATSQRCGRLLNGTGVTLRWPDGVLTPALSGHV HHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCC TGLGHA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]