| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318389
Identifier: 158318389
GI number: 158318389
Start: 8081762
End: 8082874
Strand: Reverse
Name: 158318389
Synonym: Franean1_6654
Alternate gene names: NA
Gene position: 8082874-8081762 (Counterclockwise)
Preceding gene: 158318390
Following gene: 158318387
Centisome position: 89.99
GC content: 73.5
Gene sequence:
>1113_bases ATGAACACGGCGCTCGTACTCGGGCTGCCCACGACCATTGTCTCGGCGGCCCTGTACGGGGTCGCGCCGCTGCTACAGGC GATGGCCGCCCGGAGGGAGGAGGCCGGCACCGGCCTCGGGCTCGGCCTGCTGGCCCGGCTGGCCACCCGGCCGTTGTGGC TGATCGGCCTGGGGGTTGAGGCCGGCTCGTTCCTGCTGGAGGTCTACGCCCTGTCGGTGGCGCCGGTGGCGCTCGTCGCG CCGGTGATGGCCCTCGACATGATCGTGTTCACCCTGCTCGCGCGCCGGGCGCTGGGTGAACAGATCAGCCGGGTCGGCTG GAGCGGCGTGGGCCTGATGGTGGCCGGCGTCGGGCTGCTCGCCTACGCCTTCCACCGTAACGCGGAGGTCGGCAGCCCGG CGGGCAACGGCGTCCTGCTCGCCTTCCTGGTGCTCGGGCTGATCTTCTCGCTGCTGTGCGCGTTCGGCGCGAACCTGGCC GCGGCGAAACGGCAGGTCGCCGGGGCCGCGCTGGGGTTCGGGCTGGCCGCCGGGGTCAGCTATGCCATCGCGACCCTGGC CACCCGCCAGATCGGGCTCGCGGTGCACGAACGCCGCAACAGCGACTCGACGCTCATCGACCTGCTGTCCACGCCGACGC CCTACGTCCTCATCCTGTTCTCCGTGCTGGCCCTCGGGCTGGAGCAGCGCGGCCTGCAGGGCCGGGCCGCGGTCATCGCC TTCCCCGTCACCAGCGGGGTCTCGGCGTTCCTCCCGGTGACCCTGGGGCTGACCCTGTTCGACGAGCCCGCGCCGGACGG CCCGCGCCTGCTCGCCTTCATCGTCTCGCTGGTGATGGTCGCCGCCGGCATCGGCGCGCTCGGCCGCGACCGGATGGCCG CCAACCGGTCGGTCGAGGACGAGCCGGCCGTCGATCCCCGAGCCGGTTGCGGTCCCGCCGACGAGGACGACTATCGTCCC CTCGACGGTGCCACCGACCAGGACGACTGGGCTGTTCCCGGGACGGGAGCCGGCTACGACCGCGGCGGAACCGCCCCGGG CGGCGCGCCCGCGCACGGGTCGGCCGACAGGTTCGGCGTGGTCATGGACCCATTGCGGAGTGCGCAGAGCTGA
Upstream 100 bases:
>100_bases TTGTGGGAGATGATGCCGTTGGGGTCGCCGCCGTTGGGGCGGCGCACCCTGGCTCGGCCGCCCGTGCCGGCGGATGGGAC GCTGCGATGGTGAGCCGCGC
Downstream 100 bases:
>100_bases GTCAGGATGGGGCTCATGGGCGAAATGTCCCGTGGGCCCGTGGGTCGGTGAGGGCATCGCGGCAGGCGTTCGAGGTGCGG CCCCGCTCGGCCGGGATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MNTALVLGLPTTIVSAALYGVAPLLQAMAARREEAGTGLGLGLLARLATRPLWLIGLGVEAGSFLLEVYALSVAPVALVA PVMALDMIVFTLLARRALGEQISRVGWSGVGLMVAGVGLLAYAFHRNAEVGSPAGNGVLLAFLVLGLIFSLLCAFGANLA AAKRQVAGAALGFGLAAGVSYAIATLATRQIGLAVHERRNSDSTLIDLLSTPTPYVLILFSVLALGLEQRGLQGRAAVIA FPVTSGVSAFLPVTLGLTLFDEPAPDGPRLLAFIVSLVMVAAGIGALGRDRMAANRSVEDEPAVDPRAGCGPADEDDYRP LDGATDQDDWAVPGTGAGYDRGGTAPGGAPAHGSADRFGVVMDPLRSAQS
Sequences:
>Translated_370_residues MNTALVLGLPTTIVSAALYGVAPLLQAMAARREEAGTGLGLGLLARLATRPLWLIGLGVEAGSFLLEVYALSVAPVALVA PVMALDMIVFTLLARRALGEQISRVGWSGVGLMVAGVGLLAYAFHRNAEVGSPAGNGVLLAFLVLGLIFSLLCAFGANLA AAKRQVAGAALGFGLAAGVSYAIATLATRQIGLAVHERRNSDSTLIDLLSTPTPYVLILFSVLALGLEQRGLQGRAAVIA FPVTSGVSAFLPVTLGLTLFDEPAPDGPRLLAFIVSLVMVAAGIGALGRDRMAANRSVEDEPAVDPRAGCGPADEDDYRP LDGATDQDDWAVPGTGAGYDRGGTAPGGAPAHGSADRFGVVMDPLRSAQS >Mature_370_residues MNTALVLGLPTTIVSAALYGVAPLLQAMAARREEAGTGLGLGLLARLATRPLWLIGLGVEAGSFLLEVYALSVAPVALVA PVMALDMIVFTLLARRALGEQISRVGWSGVGLMVAGVGLLAYAFHRNAEVGSPAGNGVLLAFLVLGLIFSLLCAFGANLA AAKRQVAGAALGFGLAAGVSYAIATLATRQIGLAVHERRNSDSTLIDLLSTPTPYVLILFSVLALGLEQRGLQGRAAVIA FPVTSGVSAFLPVTLGLTLFDEPAPDGPRLLAFIVSLVMVAAGIGALGRDRMAANRSVEDEPAVDPRAGCGPADEDDYRP LDGATDQDDWAVPGTGAGYDRGGTAPGGAPAHGSADRFGVVMDPLRSAQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37789; Mature: 37789
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTALVLGLPTTIVSAALYGVAPLLQAMAARREEAGTGLGLGLLARLATRPLWLIGLGVE CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCH AGSFLLEVYALSVAPVALVAPVMALDMIVFTLLARRALGEQISRVGWSGVGLMVAGVGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AYAFHRNAEVGSPAGNGVLLAFLVLGLIFSLLCAFGANLAAAKRQVAGAALGFGLAAGVS HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YAIATLATRQIGLAVHERRNSDSTLIDLLSTPTPYVLILFSVLALGLEQRGLQGRAAVIA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE FPVTSGVSAFLPVTLGLTLFDEPAPDGPRLLAFIVSLVMVAAGIGALGRDRMAANRSVED EECCCCHHHHHHHHHCHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC EPAVDPRAGCGPADEDDYRPLDGATDQDDWAVPGTGAGYDRGGTAPGGAPAHGSADRFGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VMDPLRSAQS HHHHHHHCCC >Mature Secondary Structure MNTALVLGLPTTIVSAALYGVAPLLQAMAARREEAGTGLGLGLLARLATRPLWLIGLGVE CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCH AGSFLLEVYALSVAPVALVAPVMALDMIVFTLLARRALGEQISRVGWSGVGLMVAGVGLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH AYAFHRNAEVGSPAGNGVLLAFLVLGLIFSLLCAFGANLAAAKRQVAGAALGFGLAAGVS HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YAIATLATRQIGLAVHERRNSDSTLIDLLSTPTPYVLILFSVLALGLEQRGLQGRAAVIA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE FPVTSGVSAFLPVTLGLTLFDEPAPDGPRLLAFIVSLVMVAAGIGALGRDRMAANRSVED EECCCCHHHHHHHHHCHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCC EPAVDPRAGCGPADEDDYRPLDGATDQDDWAVPGTGAGYDRGGTAPGGAPAHGSADRFGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VMDPLRSAQS HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA