| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318387
Identifier: 158318387
GI number: 158318387
Start: 8078946
End: 8080010
Strand: Reverse
Name: 158318387
Synonym: Franean1_6652
Alternate gene names: NA
Gene position: 8080010-8078946 (Counterclockwise)
Preceding gene: 158318389
Following gene: 158318386
Centisome position: 89.96
GC content: 75.21
Gene sequence:
>1065_bases ATGGCCGATATCAGCCGTGTTCTGTTCCTGCGCCACCTGCGTGGCACCCCGACGGCGTACATCCGCCACCAGCGGGGCAC CGCCGTCGCCCACGAGGGCATCGGCCTGGTGTTCTGGTACCGGCCGCGGACGGCCGTGATCAGCGAGGTCCCGGTGGACG ACCGGGAGCTTCCGGTGGTCTTCCACGCCCGGACCGCGGACTTCGCCGACGTCGCCGTCCAGTCGACGGTCACCTTCCGC ATCGCCGACCCGGCGCTCGCCGCGAGCCGTCTCGACTTCGGCATCGACCCCGAGCTGGGGAGCTGGCGCGAGGACCCGCT CGCCCGGCTCGCCGAGATGATCACGGAGACCGCCCAGCAGTACGCCGCCGACCAGCTCGTCCGCATGCCGCTCACCGACG CCCTGGTGGACGGCGTCGCGGCGGTCCGCCAGCGCGTCGGCCAGGGCCTCGGCGGCGACGCCCGCCTCGCCCAGACCGGG ATCGCGCTCGTCGGTGTCCGGGTCGTCGCCATCCGGCCGGTGCCGGAGGTGGAGAAGGCGCTGGGCACCCCTACCAGGGA AAAGATCCAGACTGAGGCCGACCGCGCCACCTACAGCCGCCGCGCGCTGGCGGTCGAGCAGGAGCGCCGGATCGGCGAGA ACGAGCTGCAGAGCAAAATCGAGCTGGCCCGCCGCGGGGAACAGCTCGTCGTCCAGGAAGGCGCCAACGAGCAACGCCGG ATGACCGAGCAGGCGGCGGCGGCGCGGATCAGCGCCACCGCGCAGGCCGAGCGGGCCGAGACCGCGGCCCGCGCCGAGGC CGAGCGGGTGCGGCTGGAAGCCGCCGCCCGTGCCGACGCGGTCCGGCTGGTCGGCGCGGCCGAGGCCGACGCCGAGGCCG CCCGGGTCGGCGCGCTGGCCGGCATGGACACGGTGACGCTGGTCGCCCTCGCCGTGCGCGACCTGGCCGACCACCTGCCG GACATCGGTGCCCTCACCATCACGCCGGACGTCCTCACCGAGGCGTTCGCCCGCTTCGCCCGGCCCGGCCTGACGGCCGC CGTGCCGGCCGGCGGCGAGCGGTGA
Upstream 100 bases:
>100_bases TGGCGGCGATGGTATCTCGTCAGGTTGACGAGAAGGGGAGTAGGGCTCTACAGTCCCTCTTATCGTCAGTTCGACGATAA GAGTGTGAGGAGGTCCGGCG
Downstream 100 bases:
>100_bases GCCTCGCTCCGCGCGCGGTGATCGTCCACCGGCGCACCGAGTACACCGAGCTGCTGGAGCACCACGGCACCCGCGGCCAG GCGGAGTTCTTCCTGCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: SPFH Domain-Containing Protein/Band 7 Family Protein
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MADISRVLFLRHLRGTPTAYIRHQRGTAVAHEGIGLVFWYRPRTAVISEVPVDDRELPVVFHARTADFADVAVQSTVTFR IADPALAASRLDFGIDPELGSWREDPLARLAEMITETAQQYAADQLVRMPLTDALVDGVAAVRQRVGQGLGGDARLAQTG IALVGVRVVAIRPVPEVEKALGTPTREKIQTEADRATYSRRALAVEQERRIGENELQSKIELARRGEQLVVQEGANEQRR MTEQAAAARISATAQAERAETAARAEAERVRLEAAARADAVRLVGAAEADAEAARVGALAGMDTVTLVALAVRDLADHLP DIGALTITPDVLTEAFARFARPGLTAAVPAGGER
Sequences:
>Translated_354_residues MADISRVLFLRHLRGTPTAYIRHQRGTAVAHEGIGLVFWYRPRTAVISEVPVDDRELPVVFHARTADFADVAVQSTVTFR IADPALAASRLDFGIDPELGSWREDPLARLAEMITETAQQYAADQLVRMPLTDALVDGVAAVRQRVGQGLGGDARLAQTG IALVGVRVVAIRPVPEVEKALGTPTREKIQTEADRATYSRRALAVEQERRIGENELQSKIELARRGEQLVVQEGANEQRR MTEQAAAARISATAQAERAETAARAEAERVRLEAAARADAVRLVGAAEADAEAARVGALAGMDTVTLVALAVRDLADHLP DIGALTITPDVLTEAFARFARPGLTAAVPAGGER >Mature_353_residues ADISRVLFLRHLRGTPTAYIRHQRGTAVAHEGIGLVFWYRPRTAVISEVPVDDRELPVVFHARTADFADVAVQSTVTFRI ADPALAASRLDFGIDPELGSWREDPLARLAEMITETAQQYAADQLVRMPLTDALVDGVAAVRQRVGQGLGGDARLAQTGI ALVGVRVVAIRPVPEVEKALGTPTREKIQTEADRATYSRRALAVEQERRIGENELQSKIELARRGEQLVVQEGANEQRRM TEQAAAARISATAQAERAETAARAEAERVRLEAAARADAVRLVGAAEADAEAARVGALAGMDTVTLVALAVRDLADHLPD IGALTITPDVLTEAFARFARPGLTAAVPAGGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38078; Mature: 37946
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADISRVLFLRHLRGTPTAYIRHQRGTAVAHEGIGLVFWYRPRTAVISEVPVDDRELPVV CCHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCEEEEEECCCHHHHCCCCCCCCCCCEE FHARTADFADVAVQSTVTFRIADPALAASRLDFGIDPELGSWREDPLARLAEMITETAQQ EEECCCCHHHHHHHHEEEEEECCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YAADQLVRMPLTDALVDGVAAVRQRVGQGLGGDARLAQTGIALVGVRVVAIRPVPEVEKA HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEEECCCCHHHHH LGTPTREKIQTEADRATYSRRALAVEQERRIGENELQSKIELARRGEQLVVQEGANEQRR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCHHHH MTEQAAAARISATAQAERAETAARAEAERVRLEAAARADAVRLVGAAEADAEAARVGALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHH GMDTVTLVALAVRDLADHLPDIGALTITPDVLTEAFARFARPGLTAAVPAGGER CHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCEECCCCCCC >Mature Secondary Structure ADISRVLFLRHLRGTPTAYIRHQRGTAVAHEGIGLVFWYRPRTAVISEVPVDDRELPVV CHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCEEEEEECCCHHHHCCCCCCCCCCCEE FHARTADFADVAVQSTVTFRIADPALAASRLDFGIDPELGSWREDPLARLAEMITETAQQ EEECCCCHHHHHHHHEEEEEECCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YAADQLVRMPLTDALVDGVAAVRQRVGQGLGGDARLAQTGIALVGVRVVAIRPVPEVEKA HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEEECCCCHHHHH LGTPTREKIQTEADRATYSRRALAVEQERRIGENELQSKIELARRGEQLVVQEGANEQRR HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCHHHH MTEQAAAARISATAQAERAETAARAEAERVRLEAAARADAVRLVGAAEADAEAARVGALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHH GMDTVTLVALAVRDLADHLPDIGALTITPDVLTEAFARFARPGLTAAVPAGGER CHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA